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Los Alamos National Laboratory • Est 1943

Amino acid biosynthesis
Biosynthesis of cofactors, prosthetic groups and carriers
Biosynthesis of cofactors, prosthetic groups, and carriers
Cell envelope
Cellular processes
Central intermediary metabolism
DNA metabolism
Energy metabolism
Fatty acid and phospholipid metabolism
Hypothetical
Mobile and extrachromosomal element functions
Other categories
Protein fate
Purines, pyrimidines, nucleosides and nucleotides
Regulatory functions
Replication
Transcription
Translation
Transport and binding
Transport and binding proteins
Transposon functions
Unassigned
Uncategorized
Unknown

'de novo' IMP biosynthetic process
ATP biosynthetic process
ATP synthesis coupled proton transport
ATP-dependent proteolysis
D-amino acid catabolic process
DNA catabolic process
DNA integration
DNA mediated transformation
DNA metabolic process
DNA methylation
DNA modification
DNA recombination
DNA repair
DNA replication
DNA replication initiation
DNA replication, synthesis of RNA primer
DNA restriction-modification system
DNA topological change
DNA unwinding during replication
GDP-mannose metabolic process
GMP biosynthetic process
GTP metabolic process
L-serine biosynthetic process
L-serine metabolic process
N-acetylglucosamine metabolic process
NAD biosynthetic process
RNA metabolic process
RNA modification
RNA processing
RNA-dependent DNA replication
SOS response
UMP biosynthetic process
acetyl-CoA metabolic process
alanine biosynthetic process
alanine metabolic process
alanyl-tRNA aminoacylation
amino acid biosynthetic process
amino acid metabolic process
amino acid transport
arginine biosynthetic process
arginine catabolic process
arginyl-tRNA aminoacylation
aromatic compound biosynthetic process
aromatic compound metabolic process
asparagine biosynthetic process
asparaginyl-tRNA aminoacylation
aspartyl-tRNA aminoacylation
base-excision repair
beta-lactam antibiotic catabolic process
biosynthetic process
biotin biosynthetic process
cAMP biosynthetic process
calcium ion transport
carbohydrate metabolic process
carbohydrate phosphorylation
cation transport
cell adhesion
cell cycle
cell division
cell morphogenesis
cell redox homeostasis
cell wall catabolic process
cellular biosynthetic process
cellular metabolic process
cellular protein metabolic process
chloride transport
chlorophyll biosynthetic process
chromate transport
chromatin silencing
chromosome segregation
cobalamin biosynthetic process
coenzyme A biosynthetic process
coenzyme M biosynthetic process
copper ion transport
creatine metabolic process
cysteine metabolic process
cysteinyl-tRNA aminoacylation
cytidine metabolic process
cytochrome c oxidase complex assembly
cytochrome complex assembly
dTMP biosynthetic process
dUTP metabolic process
deoxyribonucleotide catabolic process
dicarboxylic acid transport
electron transport
fatty acid biosynthetic process
fatty acid metabolic process
ferrous iron transport
galactose metabolic process
gluconeogenesis
glucose metabolic process
glutamine metabolic process
glutamyl-tRNA aminoacylation
glycerol ether metabolic process
glycerol-3-phosphate catabolic process
glycerol-3-phosphate metabolic process
glycine biosynthetic process
glycine catabolic process
glycine metabolic process
glycogen biosynthetic process
glycolysis
glycyl-tRNA aminoacylation
heme biosynthetic process
heme transport
high affinity iron ion transport
histidine catabolic process
histidyl-tRNA aminoacylation
hormone-mediated signaling
intracellular protein transport
ion transport
iron ion homeostasis
iron ion transport
iron-sulfur cluster assembly
isoleucyl-tRNA aminoacylation
isoprenoid biosynthetic process
lactate transport
leucyl-tRNA aminoacylation
lipid A biosynthetic process
lipid biosynthetic process
lipid catabolic process
lipid glycosylation
lipid metabolic process
lipoate biosynthetic process
lipopolysaccharide biosynthetic process
lysyl-tRNA aminoacylation
mRNA catabolic process
menaquinone biosynthetic process
metabolic process
metal ion transport
methionine biosynthetic process
methionine salvage
methionyl-tRNA aminoacylation
methylation
mismatch repair
multidrug transport
negative regulation of transcription
nitrogen compound metabolic process
nor-spermidine biosynthetic process
nucleoside catabolic process
nucleoside metabolic process
nucleosome assembly
nucleotide biosynthetic process
nucleotide catabolic process
nucleotide metabolic process
nucleotide-excision repair
nucleotide-sugar metabolic process
oligopeptide transport
one-carbon compound metabolic process
organic acid metabolic process
organic acid phosphorylation
pantothenate biosynthetic process
pathogenesis
pentose-phosphate shunt
peptide metabolic process
peptidoglycan biosynthetic process
peptidoglycan catabolic process
peptidoglycan-based cell wall biogenesis
peptidyl-histidine phosphorylation
phenylacetate catabolic process
phenylalanyl-tRNA aminoacylation
phosphate transport
phospholipid biosynthetic process
phospholipid metabolic process
phosphorylation
photosynthesis
plasmid partitioning (sensu Bacteria)
polyphosphate biosynthetic process
polysaccharide biosynthetic process
polysaccharide transport
porphyrin biosynthetic process
positive regulation of transcription
potassium ion transport
proline biosynthetic process
protein amino acid dephosphorylation
protein amino acid methylation
protein amino acid phosphorylation
protein catabolic process
protein complex assembly
protein folding
protein import
protein insertion into membrane
protein kinase C activation
protein metabolic process
protein modification process
protein polymerization
protein secretion
protein targeting
protein transport
protein-lipoylation
proteolysis
proton transport
purine base biosynthetic process
purine nucleotide biosynthetic process
purine salvage
pyridine nucleotide biosynthetic process
pyridoxine biosynthetic process
pyrimidine base biosynthetic process
pyrimidine base metabolic process
queuosine biosynthetic process
quorum sensing
rRNA catabolic process
rRNA modification
rRNA processing
redox signal response
regulation of DNA repair
regulation of DNA replication
regulation of cell shape
regulation of pH
regulation of transcription
regulation of transcription termination
removal of superoxide radicals
removal of tRNA 3'-trailer sequence
response to DNA damage stimulus
response to antibiotic
response to heat
response to oxidative stress
response to stress
riboflavin biosynthetic process
ribosome biogenesis and assembly
seryl-tRNA aminoacylation
signal peptide processing
signal transduction
sodium ion transport
sulfate transport
sulfur metabolic process
superoxide metabolic process
tRNA modification
tRNA processing
terpenoid biosynthetic process
tetrapyrrole biosynthetic process
thiamin biosynthetic process
thiamin diphosphate biosynthetic process
thiamin metabolic process
threonine biosynthetic process
threonyl-tRNA aminoacylation
toxin biosynthetic process
transcription
transcription initiation
transcription termination
transcription, DNA-dependent
translation
translational elongation
translational initiation
translational termination
transport
transposition, DNA-mediated
tricarboxylic acid cycle
tryptophanyl-tRNA aminoacylation
tyrosyl-tRNA aminoacylation
valyl-tRNA aminoacylation
xanthine metabolic process

1-2nm peptidoglycan-based cell wall
6-phosphofructokinase complex
DNA polymerase III complex
Holliday junction helicase complex
aspartate carbamoyltransferase complex
beta-galactosidase complex
cell outer membrane
cell surface
cell wall
chromatin silencing complex
chromosome
cytoplasm
excinuclease ABC complex
exodeoxyribonuclease VII complex
extracellular region
extrachromosomal circular DNA
glycine cleavage complex
integral to membrane
intracellular
large ribosomal subunit
membrane
mitochondrial matrix
nucleosome
nucleus
organelle inner membrane
outer membrane
outer membrane-bounded periplasmic space
peptidoglycan-based cell wall
phosphopyruvate hydratase complex
polyphosphate kinase complex
protein complex
proteinaceous extracellular matrix
riboflavin synthase complex
ribonucleoprotein complex
ribosome
small ribosomal subunit
type II protein secretion system complex
voltage-gated potassium channel complex

2 iron, 2 sulfur cluster binding
2-dehydropantoate 2-reductase activity
2-oxoglutarate decarboxylase activity
3'-5' exonuclease activity
3'-5'-exoribonuclease activity
3-dehydroquinate dehydratase activity
3-dehydroquinate synthase activity
4 iron, 4 sulfur cluster binding
4-alpha-glucanotransferase activity
5'-3' exonuclease activity
5S rRNA binding
6-phosphofructokinase activity
ATP binding
ATP-dependent DNA helicase activity
ATP-dependent helicase activity
ATP-dependent peptidase activity
ATPase activity
CTP synthase activity
CoA-transferase activity
D-alanine-D-alanine ligase activity
DNA N-glycosylase activity
DNA binding
DNA helicase activity
DNA ligase (ATP) activity
DNA ligase (NAD+) activity
DNA photolyase activity
DNA primase activity
DNA replication origin binding
DNA topoisomerase activity
DNA topoisomerase type I activity
DNA-dependent ATPase activity
DNA-directed DNA polymerase activity
DNA-directed RNA polymerase activity
FAD binding
FMN adenylyltransferase activity
FMN binding
GDP-mannose 4,6-dehydratase activity
GTP binding
GTP cyclohydrolase I activity
GTP cyclohydrolase II activity
GTPase activity
Holliday junction helicase activity
IMP cyclohydrolase activity
L-aspartate oxidase activity
L-lactate dehydrogenase activity
MAP kinase activity
N-acetyltransferase activity
N-methyltransferase activity
NAD binding
NAD(P) transhydrogenase activity
NAD+ kinase activity
NADP binding
O-methyltransferase activity
RNA binding
RNA methyltransferase activity
RNA-directed DNA polymerase activity
UDP-glucose 4-epimerase activity
X-His dipeptidase activity
acetyltransferase activity
acid phosphatase activity
acid-amino acid ligase activity
acyl carrier activity
acyl-CoA dehydrogenase activity
acyltransferase activity
adenylate cyclase activity
adenylosuccinate lyase activity
adenylosuccinate synthase activity
alanine racemase activity
alanine-tRNA ligase activity
alpha DNA polymerase activity
alpha-L-fucosidase activity
amidase activity
amidophosphoribosyltransferase activity
amino acid binding
aminoacyl-tRNA hydrolase activity
aminoacyl-tRNA ligase activity
aminomethyltransferase activity
ammonia ligase activity
amylo-alpha-1,6-glucosidase activity
anthranilate synthase activity
antioxidant activity
antiporter activity
arginine decarboxylase activity
arginine-tRNA ligase activity
asparaginase activity
asparagine-tRNA ligase activity
aspartate 1-decarboxylase activity
aspartate carbamoyltransferase activity
aspartate kinase activity
aspartate-tRNA ligase activity
aspartic-type endopeptidase activity
beta-N-acetylhexosaminidase activity
beta-galactosidase activity
beta-lactamase activity
bile acid:sodium symporter activity
binding
biotin binding
biotin synthase activity
calcium ion binding
calcium ion transporter activity
calcium-transporting ATPase activity
calpain activity
carbamoyl-phosphate synthase activity
carbohydrate binding
carbon-carbon lyase activity
carboxypeptidase A activity
catalytic activity
cation binding
cation transporter activity
chaperone binding
chorismate mutase activity
chorismate synthase activity
chromate transporter activity
cobalamin 5'-phosphate synthase activity
cobalamin binding
coenzyme binding
cofactor binding
copper ion binding
copper-exporting ATPase activity
coproporphyrinogen oxidase activity
creatinase activity
cysteine desulfurase activity
cysteine protease inhibitor activity
cysteine-tRNA ligase activity
cysteine-type endopeptidase activity
cysteine-type peptidase activity
cytidine deaminase activity
cytidylate kinase activity
cytosol alanyl aminopeptidase activity
dGTPase activity
dTDP-glucose 4,6-dehydratase activity
damaged DNA binding
delta DNA polymerase activity
deoxyribose-phosphate aldolase activity
dethiobiotin synthase activity
diacylglycerol kinase activity
diaminopimelate decarboxylase activity
dihydrodipicolinate reductase activity
dihydrofolate reductase activity
dihydrolipoyl dehydrogenase activity
dihydroneopterin aldolase activity
dihydroorotate dehydrogenase activity
dihydroorotate oxidase activity
dihydropteroate synthase activity
dipeptidase activity
dipeptidyl-peptidase IV activity
dipeptidyl-peptidase activity
double-stranded RNA binding
drug transporter activity
electron carrier activity
endodeoxyribonuclease activity
endonuclease activity
endopeptidase Clp activity
endopeptidase activity
endopeptidase inhibitor activity
excinuclease ABC activity
exodeoxyribonuclease VII activity
exonuclease activity
ferric iron binding
ferrochelatase activity
ferrous iron transporter activity
folic acid binding
formate-tetrahydrofolate ligase activity
fumarate hydratase activity
galactokinase activity
glucose-6-phosphate isomerase activity
glutamate racemase activity
glutamate-tRNA ligase activity
glutamine-tRNA ligase activity
glycerate kinase activity
glycine C-acetyltransferase activity
glycine-tRNA ligase activity
glycogen (starch) synthase activity
heat shock protein binding
helicase activity
heme binding
heme transporter activity
histidine ammonia-lyase activity
histidine-tRNA ligase activity
hydro-lyase activity
hydrolase activity
inorganic phosphate transporter activity
integrase activity
intramolecular transferase activity
ion channel activity
iron ion binding
iron ion transporter activity
iron-sulfur cluster binding
isochorismate synthase activity
isoleucine-tRNA ligase activity
isomerase activity
kinase activity
lactate transporter activity
leucine-tRNA ligase activity
ligase activity
lipid-A-disaccharide synthase activity
lipoate synthase activity
lipoate-protein ligase B activity
lyase activity
lysine permease activity
lysine-tRNA ligase activity
magnesium chelatase activity
magnesium ion binding
manganese ion binding
mannose-6-phosphate isomerase activity
membrane dipeptidase activity
metal ion binding
metal ion transporter activity
metalloendopeptidase activity
metalloexopeptidase activity
metallopeptidase activity
methionine adenosyltransferase activity
methionine-tRNA ligase activity
methionyl aminopeptidase activity
methylmalonyl-CoA mutase activity
methyltransferase activity
mismatched DNA binding
monooxygenase activity
naphthoate synthase activity
neprilysin activity
nuclease activity
nucleic acid binding
nucleoside binding
nucleoside transporter activity
nucleoside-triphosphatase activity
nucleotide binding
nucleotide kinase activity
nucleotidyltransferase activity
oxidoreductase activity
pantoate-beta-alanine ligase activity
penicillin binding
peptidase activity
peptide deformylase activity
peroxidase activity
phenylalanine-tRNA ligase activity
phosphoglycerate kinase activity
phosphoglycolate phosphatase activity
phospholipase A2 activity
phosphopantetheine binding
phosphopyruvate hydratase activity
phosphoric monoester hydrolase activity
phosphorylase activity
phosphoserine phosphatase activity
polyphosphate kinase activity
polysaccharide transporter activity
precorrin-6A reductase activity
precorrin-8X methylmutase activity
prenyltransferase activity
proline-tRNA ligase activity
protein binding
protein dimerization activity
protein histidine kinase activity
protein homodimerization activity
protein methyltransferase activity
protein translocase activity
protein transporter activity
protein tyrosine phosphatase activity
protein-tyrosine kinase activity
protoporphyrinogen oxidase activity
pseudouridine synthase activity
pseudouridylate synthase activity
purine nucleotide binding
purine-nucleoside phosphorylase activity
pyridoxal phosphate binding
pyridoxamine-phosphate oxidase activity
pyruvate, phosphate dikinase activity
queuine tRNA-ribosyltransferase activity
quinolinate synthetase A activity
rRNA binding
rRNA methyltransferase activity
receptor activity
recombinase activity
riboflavin kinase activity
riboflavin synthase activity
ribonuclease H activity
ribonuclease III activity
ribonuclease P activity
ribonuclease activity
ribose-5-phosphate isomerase activity
ribosome binding
ribosylhomocysteinase activity
ribulose-phosphate 3-epimerase activity
selenide, water dikinase activity
sequence-specific DNA binding
serine carboxypeptidase activity
serine-tRNA ligase activity
serine-type endopeptidase activity
serine-type peptidase activity
shikimate 5-dehydrogenase activity
shikimate kinase activity
sigma factor activity
signal peptidase activity
signal transducer activity
single-stranded DNA binding
sodium:dicarboxylate symporter activity
solute:hydrogen antiporter activity
structural constituent of ribosome
structural molecule activity
sugar binding
sugar porter activity
sulfate porter activity
sulfuric ester hydrolase activity
sulfurtransferase activity
superoxide dismutase activity
tRNA binding
tRNA isopentenyltransferase activity
tRNA methyltransferase activity
tRNA-pseudouridine synthase activity
tetraacyldisaccharide 4'-kinase activity
thiamin diphosphokinase activity
thiamin phosphate kinase activity
thiamin pyrophosphate binding
thioredoxin peroxidase activity
thioredoxin-disulfide reductase activity
thiosulfate sulfurtransferase activity
threonine-tRNA ligase activity
thymidine kinase activity
thymidylate synthase activity
transaminase activity
transcription factor activity
transcription factor binding
transcription regulator activity
transcriptional activator activity
transcriptional repressor activity
transferase activity
transition metal ion binding
transketolase activity
translation elongation factor activity
translation initiation factor activity
translation release factor activity
transmembrane receptor activity
transporter activity
transposase activity
triose-phosphate isomerase activity
tripeptide aminopeptidase activity
tryptophan-tRNA ligase activity
two-component sensor activity
tyrosine-tRNA ligase activity
unfolded protein binding
uracil DNA N-glycosylase activity
uridine kinase activity
uridylate kinase activity
urocanate hydratase activity
uroporphyrinogen-III synthase activity
valine-tRNA ligase activity
voltage-gated chloride channel activity
voltage-gated potassium channel activity
zinc ion binding

Cytoplasm
Extracellular
Inner membrane
Outer membrane
Periplasm