Local Blast Search for
Sequence
Choose program parameters
Program:
blastp
blastn
blastx
tblastn
tblastx
Database:
oralpro
bacteriocins
aactpro
aactnuc
aactgen
aactigs
anaepro
anaenuc
anaegen
anaeigs
chutpro
chutnuc
chutgen
fnucpro
fnucnuc
fnucgen
fnucigs
fnucppro
fnucpnuc
fnucpgen
fnucpigs
pginpro
pginnuc
pgingen
pginigs
pgin2pro
pgin2nuc
pgin2gen
pgin2igs
pintpro
pintnuc
pintnewgen
pintigs
sagapro
saganuc
sagagen
sagaigs
sgorpro
sgornuc
sgorgen
sgorigs
smitpro
smitnuc
smitgen
smitigs
smutpro
smutnuc
smutgen
smutigs
spnepro
spnenuc
spnegen
spneigs
ssanpro
ssannuc
ssangen
ssanigs
stherpro
sthernuc
sthergen
stherigs
tdpro
tdnuc
tdgen
tdigs
tforpro
tfornuc
tforgen
tforigs
The query sequence is
NOT
filtered for low complexity regions by default.
Enter your input sequence in
FASTA
format
Advanced options for the BLAST server:
Expect:
0.0001
0.01
1
10
100
1000
Filter:
default
none
Descriptions:
0
1
10
50
100
250
500
Alignments:
0
1
10
50
100
250
500
Query Genetic Codes (blastx only):
Standard (1)
Vertebrate Mitochondrial (2)
Yeast Mitochondrial (3)
Mold Mitochondrial; ... (4)
Invertebrate Mitochondrial (5)
Ciliate Nuclear; ... (6)
Echinoderm Mitochondrial (9)
Euplotid Nuclear (10)
Bacterial (11)
Alternative Yeast Nuclear (12)
Ascidian Mitochondrial (13)
Flatworm Mitochondrial (14)
Blepharisma Macronuclear (15)
Other advanced options:
Credits to:
Tom Madden, Sergei B. Shavirin, and Jinghui Zhang
National Center for Biotechnology Information
Last Accessed: