Gene Image Map for Fusobacterium nucleatum
 Enter coordinates to view a section of the genome   

This search page takes as input two coordinates into the genomic DNA sequence. The output is all genes and intergenic space (IGS) defined by the start and stop coordinates. If a start or stop coordinate lies within a gene or an IGS, that particular gene or IGS is omitted, hence the map is everything greater or equal to start and less than stop. A pull-down menu appears if multiple molecules, plasmids or contigs are available to map.

Start coordinate:
Stop coordinate:


The genes shown in the Gene Image Map are scaled down to produce the image. Please check the gene start and stop positions in the table below to see the exact coordinates. See the Color Legend for color representation.

MiniMap pIGR3 pIGR4 pIGR2 pIGR6 pIGR5 pIGR1 orf7, - FNp1 orf6, - FNp6 orf3, - FNp5 orf2, - FNp4 rlxA,orf1, - FNp3 repA,orf5, - FNp7 orf7, - FNp1 orf6, - FNp6 orf3, - FNp5 orf2, - FNp4 rlxA,orf1, - FNp3 repA,orf5, - FNp7 Type: tandem, Name: pFN1-TR-4 - 124 Type: tandem, Name: pFN1-TR-1 - 121 Type: tandem, Name: pFN1-TR-2 - 122 Type: tandem, Name: pFN1-TR-3 - 123 orf7, - FNp1 orf6, - FNp6 orf3, - FNp5 orf2, - FNp4 rlxA,orf1, - FNp3 repA,orf5, - FNp7 orf4, - FNp2 orf4, - FNp2

Color Legend
c Plus Strand Gene - Right Arrow
c Minus Strand Gene - Left Arrow
c Intergenic Region - Both Strands
c Transfer RNA
c Ribosomal RNA
c Repeat

StartStopLengthIDNameDefline
145306162FNp1orf7hypothetical protein taken from plasmid pFN1 from F.nucleatum
307522216pIGR2  
523867345FNp2orf4hypothetical protein taken from plasmid pFN1 from F.nucleatum
83718831047FNp3orf1DNA relaxation protein homolog taken from plasmid pFN1 from F.nucleatum
188418852pIGR3  
18862620735FNp4orf2hypothetical protein taken from plasmids pFN1 and pPA52 from F.nucleatum
26212735115pIGR4  
27363269534FNp5orf3hypothetical protein taken from plasmid pFN1 from F.nucleatum
32703791522pIGR5  
37924001210FNp6orf6hypothetical protein taken from plasmid pFN1 from F.nucleatum
40024507506pIGR6  
450857311224FNp7orf5replication protein homolog taken from plasmid pFN1 from F.nucleatum
57321445589pIGR1  

View in HOMD Genome Viewer

Sequence Region
>Fusobacterium nucleatum plasmid pFN1 genome subsequence: 1 - 5887
CATATAATAACTTTTTGTTTCTTTCTTCTAGTACTTTTTTTTCTAACTCT
TTTAATTTCTTTTTACTTTTTTCAATTTTTTCTAATTCAATCGCTTTTAA
TTCTTCTAAAGTCTTTTTAATTTTTTTAGTAGCTTCCATACATATCACAC
TCCAGCATTATTATTTATAAAAATATAATTATATATAACATATCTAGTAA
AATAAATCAAGTAGTGTCGGCTTAAACAAGAGCCATATAAATTAAAAAAT
ATATATATTTTTCTTTTAATTTCTAATATAAAATGGTATAATATTTTATA
TGGCATTGTTTAAGGCAAGCTACTCACTCCTGCCGTCGTGTAGCTTGCTG
GGAAGTATCCCAGACCCTCAGAAGCACCTACAAAAATTAAAAATATATTT
TTAATTTTCTTCGGTACTTATAGGGGGATGACCCCTATAACCCCTGCGAG
TTGATTTTATAAAATTCTTGCAGGGACAGCTGCAATTATTTTATAAAACC
AACTTTAAAGAGAGTGATAATAATGATTAAATTTACATTAAGATTAATAA
TAATGATTAAATTTACATTAAGATTAACGGAAGATGAAAAAAAACTTTTA
GATATAAAAGCTGATGAATTAGGTAAATCAAAAAATGAAGTTTTAAAGTT
TCTTATAAACAATAAATTGGAAGATACTAAAAAAGAATTTGACCTATTAA
ATGAGCTTGATAAAAATTATAAAGAGCTAGGTTTTCAGATTAAAAAAATT
GGAGTAGTTTTAAATCAGATTAATAAAAATTTTTATGAAGATAAGAAAAT
ACAGATTGAAGAAATCCAAGGAGCGTTAGATGAATTATGGCAGTCTATAA
AAGTGTCAAAGGAGTAGGAAAAACTAAAAGCAGTTTATACAATATTTTAA
AGTATGTAGGAAGTCAAAATGAAAAAGAAAAAGATGATAGAGTTTATAAA
ACTACTGGTATAAATGTTAGTGATGATTATAAAAAAGCTTTTAAAGAAAT
GATGTTAACAAAAGAGCTTCATTGTAAGTTAGACGGTAGACAATATAGAC
ACCATATTCAATCTTTTAAACCTGGTGAAGTAGATGAAGAAACAGCACAT
AAAATGGCAGTAGAATTTGCAGAAAAAAATTTTAAAGGCTTTGATGTTTT
TATATCAACTCACATTGATAAAGGACACATACATAACCATATAATTATTA
ATACTGTTAATATTGATACTGGAATGAAGTTCAGAGAATTAAATAAGAAT
GAATATAATCAAAAAAAAGAAAATAATGTTGAATTAAAATCTCACGAATT
TTATTTAGAAGATTTAAAAAAATCTAGTGATGAAATTTGTCTTGCAAATA
ATTTATCGGTGATCCCCCAAAAAGAAAAAGCTGAAAGTCAGAATATTTAT
AATAGACGAGAATATAATGTTGTGATGAACAAAACAAGTTATAAAATGGA
GCTGGCAAAAGATATAAAAAGAGCTTCCAAGAATTGTAAATCAAAAGAAG
ATTTTATAAAAGCATTAGATGAAAAAGGTGTTATTGTGGATTGGGAAGAC
CATAAAAAACATATAACTTTTAAATTTAAAGATGAGAAAAAGAAATCAAT
TAGATTAGCAAATTTAGAAAAAACTTTCCAAGATGAAACTTTTAAAAAGG
AATACCTGGAACAGCAATTTTTAATAAATCAAAAAACTGAAGAAATAGGA
AATTTCAAAATTAAAGTTAATACTGAAGCTGAAAAAACTAATGAAGAAAA
ATATCAAGAGCTTCTAAATAAAAAGAGAGAACAAGATAAATTAATAGCTG
AAGAAAAATTGAAAAAGCAAAAAGAAGAAATTGAGAAAAAGAAAAATTTA
AATAGAAACAAAGGTTTCGGAATAGGAGATTAAAAATGGCTATATTAGAT
GATGATGTAAATGAAGTTAAAAATGTGAATGAGCAAGAAATAAAAATGGA
TAGTTATATTAAAAAAATAATTGAAAATGTTTTAGAAGTTCAGCTAAAAG
AACATAAAGAAATAGCTTCCATTGCTAAAACTAAAATAGCTGAAGTAACT
TTAGAACTAGAAAAATTAAAACAGCTGGAGAAAGCAACTACTAAATATAG
AGATGATACAAATATAATTACAAATAAAATGATTGAAAATGTTGAAAATT
ATAATAAAGTATTTTTAGAAAGAATTGATAAATTTAATTTATTGATGGTA
GAAAAGTTAAATGAAGTAAAAAATACTAATCAAATATTTGCTGAGACATT
AGATAAATCAGATATTGTTGATAACCTTAATAAGAGTAGAGCAGAAATAT
TTGAGAAATTTTCAACTGATGTTGCTACAAAAACAAATAATACTTTTAAT
TTAATTGAAGATAGTCTAAATAAATTAAAAATAGCCTTCTATACAGCTGT
ATCTGTTATTGTAATATTTTTATTTTTTACGGGGATAATTTTATATAAGA
CAAATAATAGAGTTGCTAGTGTTGAAGAAAGCTTAAATAATATATCTAGT
TCAGTAACTGGATTAGTTAAAGGGGACTTAAAGTTTTGGTACAGTGAAGA
AGACAAAAAAGCCTATGTAAGTAATGTAGAAAGTATTAAAAAAAATAAAG
ATAGCAAGAAGAAAAAATAAAAGCTTCAGTAAGATAAAAAAGCAATAAAC
ATTTAATTTATTGCTTTTTTATTTTATAGTTTAGTCATTGAGGGTAAATT
TTTATAGTAATATATATTACAACAATATTACTATATTACTTTTTAACATT
CTTTAGAAACATATCCATAATATAGTTCATTAGACTTGCGACAGTTATTC
CATTTGTAGCAGCATACTTTTTGAAATTTGAGTAAATCTCTGAGTTTGTT
TTCATTGATATAGTTATATCATTTTTTAAAGTTCTATAATGTTCAGGAAG
TACAACAGTTTCATTATTTACATTAATTTTTCTTTCGTTAACAATATTAA
AAAGTATTTCTAAATTTTCTTCATTAAACAAACTATTATATTTTTCTGGA
ACTGTCAATTGAAATTCTTGCTTTTCATTTATATTACTTTTTATATTACT
ATCTATATTACTTACACTTTCAGTAACTTCTTCTTCAGGCTTCACAAAAT
CTTTTAAAGTTTCATCAACATAAGTCATAACAGCTTTTTTTATCCCTTTT
GGAGCATAATTAACTTTTACATCATCTATGAATGTAACATCATAAGTTCC
ATTCTCTAGTTTTGTAATCTCATTAATTTTTTCTAAATATTTTTTAGCAA
GACCCAAACCTTGTACCATAAAAAATCACTCCCCTTTTTATCTTAGTAAT
ATATATTACTATAATATTACTAAATTTTAACATAGCATAAATACACAAGT
TCAATCGGTAATATTTATTACTACAATATTACTTTATTACTTCAACAGTA
TACACCTGTTTTTATAAAAAATAAAGAGTTTTTTTTATGCAGAAAAAATA
TTAAAATAAATTTTATAAAAAATCTCTAAAATCATTTTTAAGGCTTTTTA
TTTTATTGAGCCATACTTTTTATTGTTAAAATGTCTAAAATCATTTTTAG
GGGTATCCTAGGACTTTTAAATTGATTTTAAATGCTGTTTGTGTGTTAAA
CTTCTTTATGTTTTTTTAAATAAAAAAAGTTAGGCATTGTGAGAGTCCTA
ACTTTTTATGTCGTTTTGTTCAAGCAACGGATACTTTGTTGCTATGTTTC
AAACTAATTATATCACATTCAATTTTTAATTTCAATATGTTATTAATTCT
AATTGTCGTTTCCTCCAAAGGAGGTGAAAGATGTTCAAGGAATGGATACT
ATTGATAATGGCTTTAATATTTATTGCTATTTTACAATATGCAGTTATAT
TAATATGGTTTCACATTATCACAAGTTTATTAGCATAGTTCTTGTAAAAA
ATAATGCTAGAGAGTTAGTAAAGTGTGAGAGCTTGAAAACTCTCTTTTTT
TTTAGGGAAACATATTTATATTTATTTTCAATCTTTTTTACCGAAAGTTG
ATTTTCCACTTTCGGTAATTTTTTATATTTTTTTATTGAGCTTCTTTTAT
TAAAAAAAATCACATTACTAATATGATTAATATAATAATATTATATAATA
ATATATAATACAGCACTCATTTTTCTTTTTAATAGCAATGTAAAACAAAA
AGATAACAGGACAAATTTTCAACTTTAACAGGACAAATTTTCAACTTTAA
CAGGACAAATTTTCAACTTTAACAGGACAAATTTTCAACTTTAACAGGAC
AAATTTTCAACTTTAACAGGACAAATTTTCAACTTTAACAGGACAAATTT
CATTGACAGTCTTATATTATTGGTGTATAATGTTTTTATGAAATAAAATT
TCCATAAAAGGAGCTGAAGATTTTAGTGAATAATGATTTAGTAAAAGTAC
ATAAAGATTTTACCAAATTAAATATAGGGACATTAAGTGAAAAAGAATTA
GAATTATTTTATTATATATGTTTAAATGTAAAGGATATTAGAGATGAAAT
TATAACAATGGATTTTTCTTCTATAAAAAAAAGTTTAGGTTTAATTAATT
TTAGAGATTTAAAAAAATATATTTTAGGACTTCATCAAAAATTAGGAAAT
TTACATATTACTAATATAACAAATAAAAAAATTGAAACAATCTTTTTATT
TGAAAAATTCATAAATGATTTAGATAATAATACTTTAACTATAAGAGTAA
CAAAAGATTCTCTTTATTTTTTTAATATTGCTAACAGTTATTTAAGGTTT
CTCTTTTCAGATGTTAGAAAACTTTCAGGAAAATATTCAAAGTTATTGGT
TCCTTATTTAATGGAGTTTAGTCATAAAAAAGAAGCTGAATTTGAAAAAG
AGAGATTTTTTAATATTCTAGAAGTTGAAGAAAGTTATAGAAATAATTTA
TCAGATTTTAATAAGAGAATTCTAAAACCAGCTGTTGAAGAATTAAAAAC
ACTTTTTGAAAATTTAAAGGTTGAGCGATTAAAAAATGGAAGAGTAATAA
AAGGATATAAATTTAGCTGGACTAATGATTTTAATTTTCAAAATAAGAAA
GATAATATAGAAGAAGCAGAAGTAGTGGAAGAAAAAGAAAATATTGCTTC
AGGAGAGTTAGAAAAATATTTTAAATCAACTTTTACTGATGTAAATTATT
CAAAGAAGCATAAAGAAGTTTTAGAAAAATTATTAAAAAATAATAGTTTA
GAATATATTAAAAAATATTTATCTGAGCAGTGGGAGTATGTACAAAATGA
TAAAAATATTTTAAATAAATCAGCATATTTCTCAAAACTAATTTTAGAAG
AAAAAGCAGTATATAAAAATCATCTACCAGCTGACTATGAAGAACTAAAA
GTTGAAGAAAGAAATAGAAATATAGAAAGTACAAATACTATTACATCATT
AAAAGATTTAGTAGAAAAAGACATTACAGATTATGAAGTTAGAAAGAATA
TAACTCCTGAACAAATAGAACAAGAAGTTTTATTTAAAATAGATGTAACT
GAAGAAGAATATAATAAGATTAAAGAAGATTGGATAATAAAACGAAAAGA
TGAAGTTCCTAATAGTGATCCAAAACTTTTAGAAATTATATTTAATGCAA
GTCAATCAAAAAAATATAATATAATTAATACTAAAGAAGAAGTTAATGAA
AAAGAAAAAGAGCTTCACGAATTAGAAGAAAATATAAAAAGAATGCAAGA
AGAACTAAATAAATTAAAAAAAGAGGTATAGTATAATACCTCTTTCTTTT
TTTAAGTGGCTTAAAATTGATTTTAGAGCTTCATTTTTTTTCAACTTTTT
CTTTTTCTTCCTTTTCTATATCTTTTTTTAGTTGACGAATAAAATTAATT
ACTTTTTCTAAATTAAAATCATCTAAATCTTTAAATT

Los Alamos National Laboratory • Est 1943

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