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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap tRNA-Gln-1 IGR0022 IGR0028 IGR0027 IGR0025 IGR0021 IGR0023 IGR0026 IGR0024 IGR0029 trxA, - PG0030 PG0027 spoU, - PG0025 PG0029 PG0028 PG0026.1 cdd, - PG0026 ispF, - PG0024 PG0023 PG0022 trxA, - PG0030 PG0027 spoU, - PG0025 PG0029 PG0028 PG0026.1 cdd, - PG0026 ispF, - PG0024 PG0023 PG0022 PG0027 spoU, - PG0025 PG0029 PG0028 cdd, - PG0026 ispF, - PG0024 PG0023 PG0022 PG0026.1


LANL Gene ID: PG0027

GenBank Locus Tag: PG0031

DNA Molecule Name:
1  

GenBank ID:
34539907

Gene Name:


Definition:
hypothetical protein

Cellular Location:
Outer membrane, Extracellular [Evidence]

Gene Start:
37669

Gene Stop:
36998

Gene Length:
672

Molecular Weight*:
25069

pI*:
10.40

Net Charge*:
11.53

EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
TIGR ID: PG0031

Proteomic Data: Proteomic Data Search
TIGR Annotationhypothetical protein, GroupK (hypothetical proteins)
ORF #PG-PP/PG-PPC1PG-PP/PG-PPC2
Spectral CountPeptide IntensitySpectral CountPeptide Intensity
ProqValProqValProqValProqVal
TIGRPG0031-2.066.5e-09-2.923.3e-10-1.707.9e-09-2.923.3e-10
LANLPG00270.240.130.310.16
ConsensusSP1IP1SP2IP2

Human Oral Microbiome Database:
View in HOMD Genome Viewer

 Blast Summary:  PSI-Blast Search
No hits to gapped BLAST.

 Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.
 gi|34539907|ref|NP_904386.1|  hypothetical protein PG0031 [P...   451   e-125
 gi|34541380|ref|NP_905859.1|  hypothetical protein PG1757 [P...   346   4e-94
 gi|29346115|ref|NP_809618.1|  hypothetical protein BT_0705 [...    57   1e-06


InterPro Summary:  InterProScan

No hits reported.

COGS Summary:  COGS Search
No hit to the COGs database.
Blocks Summary:  Blocks Search
No significant hit to the Blocks database.

 ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
PG0027 is paralogously related to PG1530, a hypothetical protein. Residues 1-175 are 97% similar to PG1530.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

 Structural Feature(s):
Feature Type  Start  Stop
No predicted structural features.  
  

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:
VQIAREETRKSGANILYVINHQRPSIFGSSMHQIGGLMLLSDSVVRNEGE
GYPDSLLYDSGQRGKIGSRIKAPVHDLSFHFGPSTITNRTKGLSYSEQQL
EKKLSNGLSFVLQYKCHPKGNLYGFGLIASRYEADITKKIEYQGIGFANR
LDYIAPLFSMSTALSERWFLGMSFGKDGSQSVRLHYRFARLPVDRDLSAV
GCVRKKSPHTDDCRLTVSPLYRPS

Gene Nucleotide Sequence:  Sequence Viewer
GTGCAGATTGCTCGCGAAGAAACCAGAAAAAGCGGTGCCAATATCCTGTA
CGTGATCAATCACCAACGACCCTCTATCTTCGGCAGCTCCATGCATCAGA
TAGGCGGGCTTATGCTCTTGTCAGATTCTGTCGTGAGGAACGAGGGAGAA
GGTTATCCCGACTCGCTCCTGTACGATTCGGGTCAAAGGGGGAAAATCGG
CTCTCGGATCAAGGCACCCGTACACGACCTTTCATTCCATTTCGGCCCCT
CTACCATCACGAATCGGACAAAAGGGCTGTCTTATTCGGAGCAGCAGCTG
GAGAAAAAGCTAAGCAACGGACTTTCGTTCGTACTCCAATATAAATGTCA
CCCGAAAGGGAACCTCTACGGATTCGGTCTGATCGCCTCTCGATATGAAG
CCGACATCACTAAGAAAATCGAATACCAGGGTATCGGATTCGCCAATCGA
TTGGACTATATCGCTCCCTTATTCAGCATGAGTACTGCTCTTTCGGAGCG
GTGGTTCCTTGGGATGAGTTTCGGAAAAGATGGGAGTCAATCGGTTCGAC
TTCACTATCGGTTTGCACGTTTACCTGTAGATCGGGATCTATCCGCAGTC
GGCTGTGTACGGAAAAAATCGCCGCACACAGACGATTGCCGTCTTACAGT
GTCACCTCTTTATAGACCTTCA

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