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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0038 IGR0035 IGR0037 IGR0034 IGR0036 cdsA, - PG0040 ftsH, - PG0041 PG0037 ISPg5, - PG0034 glyA, - PG0035 htpG, - PG0038 PG0036 cdsA, - PG0040 ftsH, - PG0041 PG0037 ISPg5, - PG0034 glyA, - PG0035 htpG, - PG0038 PG0036 Type: IS element, Name: ISPg5 - 8 cdsA, - PG0040 ftsH, - PG0041 PG0037 ISPg5, - PG0034 glyA, - PG0035 htpG, - PG0038 PG0036


LANL Gene ID: PG0037

GenBank Locus Tag: PG0044

DNA Molecule Name:
1  

Genomic Island ID:
20

GenBank ID:


 Gene Name:


 Definition:
hypothetical protein

 Cellular Location:
Periplasm, Cytoplasm [Evidence]

 Gene Start:
53945

Gene Stop:
54199

Gene Length:
255

Molecular Weight*:
9743

pI*:
10.90

Net Charge*:
4.94

EC:
 

 Functional Class:
Unknown; Hypothetical  

 Gene Ontology:

Pathway: pathway table

 Comment:
TIGR ID: PG0044

 Human Oral Microbiome Database:
View in HOMD Genome Viewer

 Blast Summary:  PSI-Blast Search
No significant hits in gapped BLAST.

 Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan

No hits reported.

COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
Residues 1-55 are 54% similar to residues 1-58 of PG0086.1.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):





Feature Type  Start  Stop
No predicted structural features.  
  

Top PDB Hits:
-65% similar to PDB:2AI4  Hypothetical protein SO1698 from Shewanella oneidensis. (E_value = );

Gene Protein Sequence:

MVRESFRSQARFFQLPNQNKNFLRPRFSELKYTGFFSTRQSFGSEKGSLN
ERMRQIVSSGPCGIGFVVPFDGIETNKTLTDNNTL

Gene Nucleotide Sequence:  Sequence Viewer

ATGGTGCGAGAATCTTTTCGTTCTCAGGCGAGATTTTTTCAACTCCCGAA
CCAAAATAAAAATTTTCTCAGACCACGTTTTTCAGAACTGAAATACACCG
GATTTTTCAGTACACGTCAATCATTCGGAAGCGAAAAAGGCAGTCTGAAT
GAAAGAATGCGCCAGATTGTCAGTTCCGGACCCTGTGGCATCGGATTTGT
CGTTCCTTTCGACGGAATAGAAACAAACAAAACATTAACAGATAATAATA
CACTA








    

      
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