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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0063 IGR0061 IGR0058 IGR0060 IGR0062 IGR0064 IGR0059 PG0068 prfA, - PG0063 PG0064 abiPg, - PG0067 PG0071 PG0070 sda,sdh, - PG0072 PG0069 PG0068 prfA, - PG0063 PG0064 abiPg, - PG0067 PG0071 PG0070 sda,sdh, - PG0072 PG0069 PG0068 prfA, - PG0063 PG0064 abiPg, - PG0067 PG0066 PG0065 PG0066 PG0065 PG0071 PG0070 sda,sdh, - PG0072 PG0069


LANL Gene ID: PG0068

GenBank Locus Tag: PG0080

DNA Molecule Name:
1  

GenBank ID:
34539950

Gene Name:


Definition:
conserved hypothetical protein

Cellular Location:
Periplasm, Cytoplasm [Evidence]

Gene Start:
93922

Gene Stop:
93662

Gene Length:
261

Molecular Weight*:
10239

pI*:
10.70

Net Charge*:
10.74

EC:
 

Functional Class:
Unknown; Conserved hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
Both PG0068 and PG0478 are extremely short but conserved. Correct punctuation?

TIGR ID: PG0080

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No significant hits to gapped BLAST.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.
 gi|34539950|ref|NP_904429.1|  hypothetical protein PG0080 [P...   143   3e-33


InterPro Summary:  InterProScan

InterPro
IPR012456
Family
Protein of unknown function DUF1661
PF07877 [14-44]T 2.3e-15 PF07877 DUF1661 DUF1661


COGS Summary:  COGS Search
No hit to the COGs database.

Blocks Summary:  Blocks Search
No significant hit to the Blocks database.

ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
Residues 1-44 are 68% similar to PG0478, a conserved hypothetical protein.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

Structural Feature(s):
Feature Type  Start  Stop
non-globular  
1  
46

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:
LLFLKTWREKISALARDFFKTRTKTKKFWRDFFKIAARLSGDFRLEICCS
SFVYNLSYGVSFAPCKERKAAICEIFSRFSCFSGLVR

Gene Nucleotide Sequence:  Sequence Viewer
TTGCTATTCCTAAAAACGTGGCGCGAAAAAATTTCCGCTCTCGCGCGAGA
TTTTTTCAAAACCCGAACCAAAACGAAAAAATTTTGGCGCGACTTTTTCA
AGATTGCGGCGCGACTTTCCGGCGATTTCCGGCTCGAGATTTGTTGTTCT
TCTTTTGTCTACAATCTTTCTTATGGTGTATCTTTTGCTCCCTGCAAAGA
ACGCAAGGCCGCTATTTGTGAGATTTTTTCTCGTTTTTCTTGCTTTTCCG
GGCTTGTTAGA


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