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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0066 IGR0073 IGR0074 IGR0072 IGR0071 IGR0067 IGR0069 IGR0068 IGR0070 PG0076 PG0082 PG0081 PG0080 PG0083 PG0074 PG0078 dps, - PG0079 PG0077 melA, - PG0073 PG0076 PG0082 PG0081 PG0080 PG0083 PG0074 PG0078 dps, - PG0079 PG0077 melA, - PG0073 Type: tandem, Name: tan33 - 241 Type: tandem, Name: tan34 - 242 Type: tandem, Name: tan84 - 292 PG0076 PG0081 PG0080 PG0083 PG0074 PG0082 PG0078 dps, - PG0079 PG0077 melA, - PG0073


LANL Gene ID: PG0078

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Cytoplasm, Periplasm [Evidence]

Gene Start:
104781

Gene Stop:
105065

Gene Length:
285

Molecular Weight*:
11076

pI*:
6.50

Net Charge*:
-1.14

EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No significant hit in gapped BLAST.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan

No hits reported.

COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
PG0078 is paralogous to PG1250, a hypothetical: residues 6-95 are 74% similar to PG1250.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
















Feature Type  Start  Stop
No predicted structural features.  
  

Top PDB Hits:
-66% similar to PDB:1DMW  CRYSTAL STRUCTURE OF DOUBLE TRUNCATED HUMAN PHENYLALANINE HYDROXYLASE WITH BOUND 7,8-DIHYDRO-L-BIOPTERIN (E_value = );
-66% similar to PDB:1J8T  Catalytic Domain of Human Phenylalanine Hydroxylase Fe(II) (E_value = );
-66% similar to PDB:1J8U  Catalytic Domain of Human Phenylalanine Hydroxylase Fe(II) in Complex with Tetrahydrobiopterin (E_value = );
-66% similar to PDB:1KW0  Catalytic Domain of Human Phenylalanine Hydroxylase (Fe(II)) in Complex with Tetrahydrobiopterin and Thienylalanine (E_value = );
-66% similar to PDB:1LRM  Crystal structure of binary complex of the catalytic domain of human phenylalanine hydroxylase with dihydrobiopterin (BH2) (E_value = );

Gene Protein Sequence:

LMQTHLNEPFAKREGYQEVSFRYRFCSPIERVAQVMEERGIHIYNDTEKQ
SIDNEISRKMLCDSLIYRFNSSHGISHSPNLPSDTELMASSINRP

Gene Nucleotide Sequence:  Sequence Viewer

TTGATGCAAACTCATCTTAACGAGCCCTTTGCAAAAAGAGAAGGTTATCA
AGAAGTATCTTTTCGGTATCGTTTTTGCTCACCTATAGAGCGTGTCGCAC
AAGTCATGGAGGAGAGAGGTATTCATATCTATAACGACACTGAAAAACAG
TCAATTGACAATGAAATCTCCAGGAAAATGCTGTGCGACAGTCTTATCTA
TCGGTTTAACAGCTCGCACGGAATCTCCCACTCCCCGAACCTGCCATCCG
ACACAGAGCTGATGGCATCTTCCATCAATAGACCA








    

      
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