LANL Gene ID: PG0088
GenBank Locus Tag:
DNA Molecule Name:
1
GenBank ID:
Gene Name:
Definition:
hypothetical protein
Cellular Location:
Periplasm [Evidence]
Gene Start:
119278
Gene Stop:
118856
Gene Length:
423
Molecular Weight*:
16201
pI*:
12.20
Net Charge*:
26.23
EC:
Functional Class:
Unknown; Hypothetical
Gene Ontology:
Pathway: pathway table
Comment:
NO TIGR ID corresponds to this gene.
Human Oral Microbiome Database:
View in HOMD Genome Viewer
Blast Summary: PSI-Blast Search
No significant hits in gapped BLAST.
Top Blast Hits: Updated monthly
Click here to view the entire PsiBlast results.
InterPro Summary: InterProScan
No hits reported.
COGS Summary: COGS Search
No hit to the COGs database.
Blocks Summary: Blocks Search
No significant hit to the Blocks database.
ProDom Summary: Protein Domain Search
No significant hit to the ProDom database.
Paralogs: Local Blast Search
PG0088 is identical to PG1459 another hypothetical protein, over 141 aa residues. It is nearly identitical to PG1119 and PG1814, also hypothetical proteins.
Pfam Summary: Pfam Search
No significant hits to the Pfam 11.0 database
Structural Feature(s):
| Feature Type | Start | Stop |
| cleavable signal | ||
| non-globular |
Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).
Gene Protein Sequence:
MSMIAVFLSPILPPHGTEPIKQRTVGAKVKPFSESAKSIGSFFRADAQEK
ARRLILPLKKESRRARRNNSSINRAAIAFAVTKVRLFSLQTNLSKSFFNR
FDKKNSPRRKGLPPKKEDKRERIYNMFARVRTIKKTANEKK
Gene Nucleotide Sequence: Sequence Viewer
ATGTCAATGATCGCTGTCTTTTTATCCCCTATCCTCCCACCTCACGGCAC
AGAGCCGATCAAGCAGCGGACAGTGGGTGCAAAAGTAAAACCTTTTTCCG
AATCGGCAAAATCAATCGGCTCTTTTTTCAGGGCTGACGCTCAAGAAAAA
GCTCGTCGCCTGATCCTCCCCCTAAAAAAAGAATCCCGACGCGCTCGGCG
GAACAATTCCTCTATCAATCGGGCAGCAATCGCTTTTGCGGTCACAAAAG
TACGCCTTTTTTCTTTACAGACAAATCTTTCAAAATCTTTTTTCAACCGG
TTCGACAAAAAAAACAGCCCCCGAAGAAAAGGACTCCCTCCCAAGAAAGA
AGACAAAAGGGAGCGGATATATAATATGTTCGCGCGCGTAAGAACAATTA
AAAAGACCGCAAACGAAAAGAAA