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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap rRNA-5S-1 rRNA-23S-1 IGR0083 IGR0084 IGR0082 IGR0081 IGR0080 IGR0079 PG0092 PG0096 PG0093 wecC, - PG0094 PG0095 top3,topB, - PG0091 PG0092 PG0096 PG0093 wecC, - PG0094 PG0095 top3,topB, - PG0091 PG0092 PG0096 PG0093 wecC, - PG0094 PG0095 top3,topB, - PG0091


LANL Gene ID: PG0092

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Periplasm, Extracellular [Evidence]

Gene Start:
128286

Gene Stop:
128525

Gene Length:
240

Molecular Weight*:
8724

pI*:
9.70

Net Charge*:
6.22

EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No significant hit found in gapped BLAST with E value less than e-04.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan
























noIPR
unintegrated		






unintegrated





signalp
[1-30]? NA signalp signal-peptide
signal-peptide












COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
PG0092 is paralogous to PG1105, also a hypothetical. Residues 1-66 are 92% similar to PG1105.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
Feature Type  Start  Stop
No predicted structural features.  
  
uncleavable signal  
1  
48
transmembrane  
12  
28

Top PDB Hits:
-56% similar to PDB:1OF5  CRYSTAL STRUCTURE OF MEX67-MTR2 (E_value = );

Gene Protein Sequence:

LCSSNHRLAPRVCTLCATLCRLIHITSIRADTSSGSNNLSGYRRYTVAAN
NTNEEKLARMKPQNQYNASTPGVACQGDRV

Gene Nucleotide Sequence:  Sequence Viewer

TTGTGCTCCTCCAATCATCGCCTTGCTCCCCGTGTATGCACCTTGTGTGC
CACGCTGTGCCGTCTGATTCACATTACGTCCATACGAGCCGATACCTCCT
CCGGCTCCAATAATCTATCCGGCTACCGTCGGTACACAGTAGCAGCCAAC
AATACCAATGAGGAGAAACTCGCTCGAATGAAGCCGCAAAACCAATATAA
TGCGTCGACCCCGGGGGTAGCCTGTCAGGGCGATCGCGTT








    

      
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