Search Results

Record: 1 of 1 MiniMap

LANL Gene ID: PG0099GenBank Locus Tag: PG0113DNA Molecule Name: 1 Genomic Island ID: 2 GenBank ID: 34539978 Gene Name: Definition: possible aminoglycoside N3-acetyltransferase (AAC3) Cellular Location: Periplasm, Cytoplasm [Evidence] Gene Start: 136065 Gene Stop: 136919 Gene Length: 855 Molecular Weight*: 32037 pI*: 9.70 Net Charge*: 7.55 EC: Functional Class: Cellular processes; Toxin production and resistance Gene Ontology: Pathway: pathway table Primary Evidence: Chen T, Hosogi Y, Nishikawa K, Abbey K, Fleischmann RD, Walling J, Duncan MJ. Comparative whole-genome analysis of virulent and avirulent strains of Porphyromonas gingivalis. J Bacteriol. 2004 Aug;186(16):5473-9. PMID: 15292149 Comment: TIGR ID: PG0113. Reported by Chen et al., 2004, to be highly divergent in ATCC 33277. Human Oral Microbiome Database: View in HOMD Genome Viewer Blast Summary: PSI-Blast Search Weak hits in gapped BLAST to aminoglycoside N3-acetyltransferase sequences (EC 2.3.1.81), e.g., residues 44-192 are 27% similar to this sequence. Top Blast Hits: Updated monthly Click here to view the entire PsiBlast results. gi|34539978|ref|NP_904457.1| hypothetical protein PG0113 [P... 594 e-168 gi|156973020|ref|YP_001443927.1| hypothetical protein VIBHA... 79 3e-13 gi|117924457|ref|YP_865074.1| Aminoglycoside N3'-acetyltran... 78 7e-13 gi|82780235|gb|ABB90395.1| FrbF [Streptomyces rubellomurinus] 69 3e-10 gi|47097608|ref|ZP_00235134.1| aminoglycoside N3-acetyltran... 65 4e-09 gi|153174883|ref|ZP_01930334.1| aminoglycoside N3-acetyltra... 65 4e-09 gi|16803748|ref|NP_465233.1| hypothetical protein lmo1708 [... 65 6e-09 gi|153198118|ref|ZP_01942268.1| aminoglycoside N3-acetyltra... 64 9e-09 gi|106887320|ref|ZP_01354630.1| Aminoglycoside N3'-acetyltr... 64 1e-08 gi|149187267|ref|ZP_01865565.1| aminoglycoside N3-acetyltra... 64 1e-08 InterPro Summary: InterProScan No hits reported. COGS Summary: COGS Search No hit to the COGs database. Blocks Summary: Blocks Search No significant hit to the Blocks database. ProDom Summary: Protein Domain Search No significant hit to the ProDom database. Paralogs: Local Blast Search No paralogs found in P. gingivalis. Pfam Summary: Pfam Search No significant hits to the Pfam 11.0 database Top PDB Hits: No significant hits to the PDB database (E-value < E-10). Gene Protein Sequence: MFLKKLSRMLLSSKARASLKRWKRKLQGIGKGTTSLEDLRKVLVEELGVR PGDRLIVTSGFGYLGAEGYSPEDVVCLLQSLVTDEGLIMMPYYPPKNSHE WASEGEVFDMNHTKSGMGVLTNVFAQAAGVYMSVHPTKAVCVWGKDAEQI VQGHECTETPYAHNSPYGKVLQLGSKSIGLGVGNAPMFHVFEDTWDSPRS RYYQEQPYLLNVILKDGSKTEVSTMVHRADMVDSATPISEYIRNLNAPTY RRIKFGKSFVWIADNTELSEITKRRFEAGQNRFKR Gene Nucleotide Sequence: Sequence Viewer ATGTTCCTAAAGAAACTTTCAAGAATGTTACTGTCTTCCAAGGCTCGAGC TTCATTAAAACGTTGGAAGCGCAAGCTTCAGGGTATCGGTAAGGGTACCA CCTCGTTGGAAGATCTGAGAAAAGTCCTCGTCGAAGAGCTTGGTGTCCGT CCAGGAGATAGACTGATTGTTACCTCTGGTTTTGGATACTTAGGAGCAGA GGGGTATTCTCCAGAAGATGTTGTTTGTCTATTACAATCTTTGGTTACAG ACGAAGGGTTGATTATGATGCCTTATTATCCACCAAAGAATTCGCACGAA TGGGCTAGTGAAGGTGAGGTATTTGATATGAATCATACTAAGTCTGGGAT GGGAGTCTTAACGAATGTCTTTGCCCAGGCAGCAGGTGTTTATATGAGTG TTCATCCAACTAAGGCTGTTTGTGTCTGGGGGAAGGATGCCGAGCAGATT GTACAAGGGCATGAGTGTACAGAAACTCCGTATGCTCACAATTCCCCGTA TGGTAAGGTGCTACAACTTGGGTCTAAATCTATAGGCCTTGGTGTTGGTA ATGCCCCTATGTTTCATGTATTTGAAGATACGTGGGATTCTCCTCGTTCT CGCTATTATCAAGAGCAGCCATATCTGTTGAATGTAATTCTAAAGGATGG TAGTAAAACAGAGGTAAGTACGATGGTTCATCGAGCTGATATGGTAGATA GTGCAACGCCTATTTCGGAGTACATCAGGAATTTGAATGCTCCGACATAT CGTAGAATAAAATTTGGCAAATCTTTTGTCTGGATTGCAGATAATACAGA ACTCTCTGAGATTACCAAAAGACGATTTGAAGCTGGTCAGAATAGATTCA AGAGA Los Alamos National Laboratory • Est 1943 Operated by Los Alamos National Security, LLC for the U.S. Department of Energy's National Nuclear Security Administration Inside | © Copyright 2006 LANS LLC All rights reserved | Disclaimer/Privacy