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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0095 IGR0097 IGR0098 IGR0094 IGR0099 IGR0093 IGR0100 IGR0092 IGR0096 PG0109 PG0108 gpmA,pgmA, - PG0115 PG0110 PG0117 PG0116 PG0106 PG0107 PG0113 hemH,hemZ, - PG0112 PG0114 weeA, - PG0105 PG0109 PG0108 gpmA,pgmA, - PG0115 PG0110 PG0117 PG0116 PG0106 PG0107 PG0113 hemH,hemZ, - PG0112 PG0114 weeA, - PG0105 PG0108 PG0110 PG0117 PG0111 PG0111 PG0109 gpmA,pgmA, - PG0115 PG0116 PG0106 PG0107 PG0113 hemH,hemZ, - PG0112 PG0114 weeA, - PG0105


LANL Gene ID: PG0111

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Cytoplasm [Evidence]

Gene Start:
148325

Gene Stop:
148020

Gene Length:
306

Molecular Weight*:
11522

pI*:
8.60

Net Charge*:
1.89

EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No significant hit found in gapped BLAST with E value less than e-04.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan
























noIPR
unintegrated		






unintegrated





tmhmm
[75-95]? NA tmhmm transmembrane_regions
transmembrane_regions












COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
No paralogs found in P. gingivalis.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
Feature Type  Start  Stop
No predicted structural features.  
  
uncleavable signal  
1  
61
transmembrane  
77  
93

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

MTFSRPKSRGDPRILERLEGSAVGIPVIFYSRWYGFTPDDTLKIIGSKTD
LLTVMKEESLTFDGIKSKDFYKNETAFISISFYLVSASCLLLCRLQNSPT
NT

Gene Nucleotide Sequence:  Sequence Viewer

ATGACATTTTCCCGACCGAAAAGCCGTGGAGACCCCCGGATTTTGGAGAG
GTTGGAAGGGTCGGCTGTGGGTATTCCTGTGATTTTTTACTCCCGATGGT
ATGGTTTCACTCCCGACGACACGCTGAAAATCATCGGCTCAAAAACCGAT
CTGCTTACAGTAATGAAAGAGGAATCCCTTACCTTTGACGGCATCAAATC
GAAAGATTTTTATAAAAATGAGACAGCATTTATCTCTATTTCCTTTTATC
TTGTTTCTGCTTCTTGCCTTCTCTTATGTCGGTTGCAGAACAGTCCGACA
AACACC








    

      
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