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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0124 IGR0120 IGR0128 IGR0125 IGR0122 IGR0126 IGR0127 IGR0123 IGR0121 PG0155 PG0152 pth,spoVC, - PG0153 ctc,rplY, - PG0154 sigG,sigW, - PG0148 PG0147 pfk,pfpB, - PG0150 pepO, - PG0146 PG0151 PG0157 metG, - PG0156 PG0155 PG0152 pth,spoVC, - PG0153 ctc,rplY, - PG0154 sigG,sigW, - PG0148 PG0147 pfk,pfpB, - PG0150 pepO, - PG0146 PG0151 PG0157 metG, - PG0156 PG0155 PG0152 pth,spoVC, - PG0153 ctc,rplY, - PG0154 sigG,sigW, - PG0148 PG0147 pfk,pfpB, - PG0150 pepO, - PG0146 PG0151 PG0157 metG, - PG0156


LANL Gene ID: PG0151

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Cytoplasm [Evidence]

Gene Start:
187310

Gene Stop:
187903

Gene Length:
594

Molecular Weight*:
22059

pI*:
10.60

Net Charge*:
10.53

EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No hit found in gapped BLAST.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan

No hits reported.

COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
No paralogs found in P. gingivalis.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
















Feature Type  Start  Stop
No predicted structural features.  
  

Top PDB Hits:
-40% similar to PDB:1GII  HUMAN CYCLIN DEPENDENT KINASE 2 COMPLEXED WITH THE CDK4 INHIBITOR (E_value = );
-40% similar to PDB:1GIJ  HUMAN CYCLIN DEPENDENT KINASE 2 COMPLEXED WITH THE CDK4 INHIBITOR (E_value = );
-56% similar to PDB:1UFL  Crystal Structure of TT1020 from Thermus thermophilus HB8 (E_value = );
-56% similar to PDB:1V3R  Crystal structure of TT1020 from Thermus thermophilus HB8 (E_value = );
-56% similar to PDB:1V3S  Crystal structure of TT1020 from Thermus thermophilus HB8 (E_value = );

Gene Protein Sequence:

VAFTLTRPLPYTVLTSNGISTYAASISGTCLMMASNSIGLSEPLPTEEGA
SVFGKVFFIPVERIERVRQIGHLFAKLLQLSPVLFGRTTGALGSVHKARN
ALHFEYLILFGRSDIFQKVLHQLGTHPILSQSQNTKGIGHRWLPYLNDVA
HTYHTRRLGLQPVHSYSAFLAGIRGYRSCLEDTRSPHPTVYPYLFHLL

Gene Nucleotide Sequence:  Sequence Viewer

GTGGCGTTCACCCTCACTCGCCCTTTGCCGTATACCGTCTTGACGTCAAA
TGGAATCTCTACGTATGCGGCATCCATATCGGGTACTTGCCTGATGATGG
CATCGAATTCGATCGGACTGTCCGAACCGTTACCTACAGAAGAGGGAGCT
TCAGTCTTCGGCAAAGTCTTCTTCATCCCAGTCGAACGAATCGAACGAGT
ACGGCAGATCGGGCATCTCTTCGCTAAACTGCTCCAGCTCTCGCCTGTCC
TTTTTGGTCGGACGACCGGTGCCCTTGGCTCTGTCCACAAAGCCCGAAAT
GCGTTGCATTTCGAGTATCTCATACTCTTCGGGCGGAGTGATATTTTCCA
GAAAGTCCTTCACCAGCTTGGCACCCATCCGATTCTGAGCCAAAGCCAGA
ATACGAAAGGAATAGGTCACCGGTGGCTTCCTTACCTGAATGACGTCGCC
CACACGTACCATACGCGAAGGCTTGGCTTGCAGCCCGTTCACAGTTACTC
GGCTTTTCTTGCAGGCATCCGTGGCTATCGTTCGTGTCTTGAAGATACGC
GTAGCCCACATCCAACGGTCTATCCTTACCTCTTCCATCTCCTT








    

      
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