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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0140 IGR0142 IGR0141 IGR0139 IGR0143 PG0169.2 ISPg1, - PG0169 ragB, - PG0171 ragA, - PG0170 PG0168 PG0169.2 ISPg1, - PG0169 ragB, - PG0171 ragA, - PG0170 PG0168 Type: IS element, Name: ISPg1 - 2 ISPg1, - PG0169 ragB, - PG0171 ragA, - PG0170 PG0168 PG0169.1 PG0169.2 PG0169.1


LANL Gene ID: PG0169.2

GenBank Locus Tag:

DNA Molecule Name:
1  

Genomic Island ID:
4

GenBank ID:


 Gene Name:


 Definition:
hypothetical protein

 Cellular Location:
Periplasm [Evidence]

 Gene Start:
217932

Gene Stop:
218258

Gene Length:
327

Molecular Weight*:
12447

pI*:


Net Charge*:


EC:
 

 Functional Class:
Unknown; Hypothetical  

 Gene Ontology:

Pathway: pathway table

 Comment:
NO TIGR ID corresponds to this gene.

 Human Oral Microbiome Database:
View in HOMD Genome Viewer

 Blast Summary:  PSI-Blast Search
No hit found in gapped BLAST.

 Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan

No hits reported.

COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
PG0169.2 is paralogous to PG0326, PG1166.1, and PG1496.2 plus some very weak similarities. Residues 2-50 are 69% similar to PG0326, a hypothetical protein.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):





Feature Type  Start  Stop
No predicted structural features.  
  

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

VVSKNVARKLFHFGARSKKISSQNEKNPAPLYSIKSNRNQSVLGSYSGDS
SSQAYRRIALMWNQGISILRAFDRSKETLYLPKFKFTSVYCCSFCKVDLT
NRMVSKLLR

Gene Nucleotide Sequence:  Sequence Viewer

GTGGTTTCTAAAAACGTGGCGCGTAAACTTTTTCATTTTGGCGCGAGAAG
TAAAAAAATCTCGAGCCAAAACGAAAAAAATCCTGCGCCACTTTATTCCA
TAAAATCGAACCGAAATCAAAGTGTTTTAGGCTCGTACTCCGGAGACAGT
AGTTCACAAGCATACAGGAGAATAGCATTGATGTGGAATCAAGGTATCTC
AATATTGAGAGCGTTCGATCGGTCAAAAGAAACACTCTATCTTCCAAAAT
TCAAATTTACATCGGTTTATTGCTGCTCCTTTTGCAAAGTGGATTTGACA
AATCGTATGGTGAGCAAATTGCTTAGA








    

      
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