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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0188 IGR0187 IGR0192 IGR0193 IGR0189 IGR0186 IGR0191 IGR0190 IGR0185 ustA, - PG0223 PG0225 PG0221 uspA, - PG0222 oadA, - PG0226 PG0224 PG0227 PG0228 nusA, - PG0229 infB, - PG0230 ustA, - PG0223 PG0225 PG0221 uspA, - PG0222 oadA, - PG0226 PG0224 PG0227 PG0228 nusA, - PG0229 infB, - PG0230 ustA, - PG0223 PG0225 PG0221 uspA, - PG0222 oadA, - PG0226 PG0224 PG0227 PG0228 nusA, - PG0229 infB, - PG0230


LANL Gene ID: PG0227

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Cytoplasm [Evidence]

Gene Start:
284190

Gene Stop:
284474

Gene Length:
285

Molecular Weight*:
11038

pI*:
12.20

Net Charge*:
12.46

EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No hit found in gapped BLAST.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan
























noIPR
unintegrated		






unintegrated





signalp
[1-42]? NA signalp signal-peptide
signal-peptide




tmhmm
[29-49]? NA tmhmm transmembrane_regions
transmembrane_regions












COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
No paralogs found in P. gingivalis.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
Feature Type  Start  Stop
transmembrane  
29  
45
transmembrane  
32  
49
transmembrane  
78  
95

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

LFFGAERRRIAEPKISKTRTTRKIFTREIFLLLARVLFFSRTIFFRSAIM
LFHAPQPLGKQFLLPVEKGFDSRGRGAYRLPYVIIGMPHVILSSI

Gene Nucleotide Sequence:  Sequence Viewer

TTGTTTTTTGGTGCCGAAAGACGGAGAATTGCCGAGCCTAAAATCTCAAA
AACTCGAACCACAAGGAAAATCTTTACGCGCGAGATTTTTTTGCTTTTGG
CTCGAGTTTTATTTTTTTCTCGAACCATCTTTTTTCGATCCGCAATTATG
CTTTTTCATGCTCCGCAACCGCTCGGAAAGCAATTCCTGCTACCTGTCGA
GAAAGGCTTCGACAGCAGAGGCCGTGGTGCATACCGGCTCCCTTATGTAA
TAATAGGTATGCCTCATGTAATTCTTTCATCGATA








    

      
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