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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0208 IGR0204 IGR0206 IGR0211 IGR0205 IGR0207 IGR0210 IGR0209.1 IGR0212 IGR0209 trxA, - PG0246 PG0245.1 PG0248 PG0251 PG0250 ssb, - PG0243 PG0245 exoA, - PG0241 momR,oxyR, - PG0242 trmU,ycbF, - PG0240 ISPg2, - PG0249 tlyC, - PG0244 trxA, - PG0246 PG0245.1 PG0248 PG0251 PG0250 ssb, - PG0243 PG0245 exoA, - PG0241 momR,oxyR, - PG0242 trmU,ycbF, - PG0240 ISPg2, - PG0249 tlyC, - PG0244 Type: IS element, Name: ISPg2 - 4 trxA, - PG0246 PG0245.1 PG0248 PG0251 PG0250 ssb, - PG0243 PG0245 exoA, - PG0241 momR,oxyR, - PG0242 trmU,ycbF, - PG0240 ISPg2, - PG0249 tlyC, - PG0244


LANL Gene ID: PG0245.1

GenBank Locus Tag:

DNA Molecule Name:
1  

Genomic Island ID:
21

GenBank ID:


 Gene Name:


 Definition:
hypothetical protein

 Cellular Location:
Cytoplasm [Evidence]

 Gene Start:
306700

Gene Stop:
306161

Gene Length:
540

Molecular Weight*:
20982

pI*:


Net Charge*:


EC:
 

 Functional Class:
Unknown; Hypothetical  

 Gene Ontology:

Pathway: pathway table

 Comment:
NO TIGR ID corresponds to this gene.

 Human Oral Microbiome Database:
View in HOMD Genome Viewer

 Blast Summary:  PSI-Blast Search
No hit found in gapped BLAST.

 Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan

No hits reported.

COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
No paralogs found in P. gingivalis.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):





Feature Type  Start  Stop
No predicted structural features.  
  

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

VYIRKYISVYKKIYRSIYENIFPHMRKFRHLLGAIKTLTLNYLASEARYS
SRIRRRSELLRCFDIFSWFVAHPNCQLFSVHDRIKIRLRELAAMAAMACT
GEDKFAGAKSLNRNVNVAGTRIRIDQFERKQRVFARQLEGKCYIKAFEGC
IGGIENFVCGLFGTPYDGRKQSSSRLIGRH

Gene Nucleotide Sequence:  Sequence Viewer

GTGTATATACGGAAATATATTTCCGTATATAAGAAAATTTATCGGAGTAT
ATACGAAAATATATTTCCGCATATGCGGAAATTTCGCCACCTTCTTGGTG
CGATAAAAACGCTGACGCTGAACTACTTGGCATCGGAGGCGAGGTATTCT
TCGAGGATACGAAGGCGCTCCGAATTGCTGAGATGTTTTGACATTTTTTC
TTGGTTTGTCGCACACCCCAACTGTCAACTTTTTTCAGTACACGACAGGA
TCAAAATCCGACTTCGGGAATTAGCGGCTATGGCTGCAATGGCATGCACA
GGTGAGGATAAATTCGCCGGTGCAAAGAGCCTGAACAGGAATGTGAATGT
CGCCGGTACACGAATCCGAATAGATCAGTTCGAAAGAAAACAGCGTGTTT
TCGCTCGGCAGCTCGAAGGGAAGTGCTACATCAAAGCGTTTGAGGGATGC
ATCGGAGGGATTGAAAATTTTGTATGCGGTCTCTTTGGCACTCCATATGA
TGGTCGCAAGCAATCGTCGTCTCGCCTCATCGGCAGACAT








    

      
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