Basic Search | Intermediate Search | Advanced Search | Gene Image Map |  Sequence Search |  Protein Motif Search |  Repeat Search |  DNA/RNA Motif Search |  Home

Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0272 IGR0277 IGR0270 IGR0278 IGR0274 IGR0279 IGR0276 IGR0271 IGR0273 IGR0275 PG0326 PG0322 PG0325 PG0323 pyrI, - PG0330 PG0331 lemA, - PG0332 PG0321 pyrB, - PG0329 PG0327 PG0324 recG, - PG0320 PG0326 PG0322 PG0325 PG0323 pyrI, - PG0330 PG0331 lemA, - PG0332 PG0321 pyrB, - PG0329 PG0327 PG0324 recG, - PG0320 PG0326 PG0322 PG0325 PG0323 pyrI, - PG0330 PG0331 lemA, - PG0332 PG0321 pyrB, - PG0329 PG0327 PG0324 recG, - PG0320 PG0326.1 PG0328 PG0328 PG0326.1


LANL Gene ID: PG0326

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Periplasm, Cytoplasm [Evidence]

Gene Start:
389224

Gene Stop:
388985

Gene Length:
240

Molecular Weight*:
9134

pI*:
12.40

Net Charge*:
13.98

EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No hit found in gapped BLAST.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan

No hits reported.

COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
Residues 31 to 79 are 69% similar to PG0169.2, a hypothetical.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
















Feature Type  Start  Stop
transmembrane  
15  
31
transmembrane  
19  
36

Top PDB Hits:
-55% similar to PDB:1SEZ  Crystal Structure of Protoporphyrinogen IX Oxidase (E_value = );
-53% similar to PDB:1JCU  Solution Structure of MTH1692 Protein from Methanobacterium thermoautotrophicum (E_value = );

Gene Protein Sequence:

MTTEKSIRRKSVAGIISQPIGLRAGIFVFAVWKNVVRKLFRFGARSKKIS
NQNEKIPAPPSSEKTRRNQRIFGSYRWDSG

Gene Nucleotide Sequence:  Sequence Viewer

ATGACAACGGAAAAATCAATCCGCCGAAAAAGTGTAGCAGGCATCATCTC
ACAGCCGATCGGTTTACGTGCCGGAATTTTTGTGTTTGCAGTTTGGAAAA
ACGTGGTGCGTAAACTTTTTCGCTTTGGCGCGAGAAGTAAAAAAATCTCG
AACCAAAACGAAAAAATTCCGGCACCACCTTCTTCAGAAAAGACGCGCCG
CAATCAGAGGATTTTCGGCTCGTATCGGTGGGATAGTGGT








    

      
 Los Alamos National Laboratory • Est 1943 
    

    


Operated by Los Alamos National
    Security, LLC for the U.S. Department
    of Energy's National Nuclear Security Administration


Inside | © Copyright
2006 LANS LLC All rights reserved | Disclaimer/Privacy