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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0316 IGR0312 IGR0314 IGR0311 IGR0315 IGR0310 IGR0313 PG0369 PG0370 ileS, - PG0372 PG0374 PG0367 PG0368 PG0373 PG57, - PG0376 PG0375 PG0369 PG0370 ileS, - PG0372 PG0374 PG0367 PG0368 PG0373 PG57, - PG0376 PG0375 PG0370 ileS, - PG0372 PG0374 PG0367 PG0368 PG0369 PG0373 PG57, - PG0376 PG0375


LANL Gene ID: PG0374

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Cytoplasm [Evidence]

Gene Start:
442518

Gene Stop:
441628

Gene Length:
891

Molecular Weight*:
34272

pI*:
9.60

Net Charge*:
16.31

EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No hit found in gapped BLAST.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan

No hits reported.

COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
No paralogs found in P. gingivalis.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
















Feature Type  Start  Stop
transmembrane  
21  
37
non-globular  
105  
195
transmembrane  
221  
237
transmembrane  
274  
290

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

LSLSKTVSPKKTKTNRGDCQEFVLTVSPCLFVLPAFLEQSYRNAYVEYGK
YLCRIDRLLCIFGKVNQQVRVTRYHIGRRDLCFSGEKHSEICKERYPRYG
NSKSVADADIRLYGSTQMYRCFHLCRRRGLDAYLIRRIVFILDRDDRHVV
RIERALIVHDGLSRILIDQLYLGIDLRTVEVQTGRYAESVLERMVISQHM
TGKRGYLQIPPDPGCIAQYRLICLQLLGIIRLKHFVLDNGNGGYEGKACT
SCQFGHEARAPLYFDAVQYTYRNSCSIMDLSIMKVVVVLSNSRQSEQ

Gene Nucleotide Sequence:  Sequence Viewer

TTGTCGTTATCTAAGACTGTATCCCCCAAAAAAACGAAAACAAACAGGGG
AGACTGTCAGGAATTTGTCCTGACAGTCTCTCCCTGTTTGTTTGTGCTTC
CTGCGTTTTTAGAACAATCGTATCGAAACGCCTATGTTGAGTACGGGAAG
TATCTGTGTCGAATAGACCGCCTCCTGTGCATCTTCGGAAAAGTCAATCA
GCAAGTTCGGGTCACCCGCTATCACATTGGGAGACGAGATCTGTGCTTTT
CCGGAGAAAAGCATTCCGAGATCTGCAAAGAAAGATACCCTCGATACGGG
AACAGCAAATCCGTAGCCGATGCCGATATAAGGCTGTACGGTTCTACCCA
AATGTACCGATGCTTCCACCTCTGCCGTCGAAGAGGGTTGGATGCTTACC
TTATCCGCCGGATTGTCTTTATCCTTGATCGTGATGACAGGCATGTTGTT
CGGATTGAGCGTGCTCTGATCGTTCATGATGGATTGTCCCGTATTTTGAT
TGATCAGCTGTACCTTGGCATTGATTTGCGGACGGTTGAAGTACAAACCG
GCCGTTACGCGGAAAGCGTTCTTGAACGGATGGTAATCAGCCAACATATG
ACCGGAAAAAGAGGATACCTTCAGATTCCCCCTGATCCCGGGTGTATAGC
CCAATACCGACTGATATGCCTCCAACTCTTGGGGATCATCCGGCTCAAAC
ACTTTGTTCTTGATAATGGCAATGGAGGGTATGAAGGCAAAGCCTGCACG
AGCTGTCAGTTCGGGCATGAAGCGCGCGCTCCCCTCTATTTTGACGCCGT
TCAATACACCTACCGAAACAGTTGTTCCATAATGGATCTTTCCATCATGA
AGGTTGTTGTCGTTTTGAGCAATAGCCGGCAGAGCGAACAA








    

      
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