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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0336 IGR0337 IGR0339 IGR0340 IGR0338 PG0404.2 PG0400 PG0403 PG0399 PG0402 PG0401 PG0405 PG0406 PG0404 PG0404.2 PG0400 PG0403 PG0399 PG0402 PG0401 PG0405 PG0406 PG0404 Type: tandem, Name: tan60 - 268 PG0400 PG0403 PG0399 PG0404.1 PG0404.2 PG0404.1 PG0402 PG0401 PG0405 PG0406 PG0404


LANL Gene ID: PG0403

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Cytoplasm [Evidence]

Gene Start:
479455

Gene Stop:
477932

Gene Length:
1524

Molecular Weight*:
128393

pI*:
10.80

Net Charge*:
39.90

EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No hits in GenBank by gapped BLAST.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan

No hits reported.

COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
No paralogs found in P. gingivalis.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
















Feature Type  Start  Stop
No predicted structural features.  
  
transmembrane  
306  
322

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

MFREXQIVAVLQHVYAFDIHMCDRFALIFDEAVCRDLYSRQFAQQIGQIP
IVRPHESRSRIGNRISQLAYRFGAYHHFLELDVGRHQSEKQRRSSRIDGF
AHLPIPHISYAKEFSAGFFLQRERAVGFREDEGKRFAGGIHELAHCPGKR
LLALGIYHTTGKHLSGRFLSNDRQQPRHAQPQIRQNRSDSPIHHALFLLQ
WIKRLRWQMRKVYRYRGIDKSRRIGHDFGIMLVDITNRFAHLFTRADFRK
GIFLEINRRRKCNLLHSVQFEYVLSVIRTDSDDQAGQSPKNVRPIREGNI
LGIPSSIIPSAVVAGGLSASVFHDLLGLFPDLPIERRRRTTVFIRTDYRI
SVLMIILSRWIAFKYGSPPLGLLDVIISFRKDLHSSPFLPSYGIIHRVRC
ILVKVFEATPSLPYFQYTLCLGFFVSPRGIFHKRDFVKKSPFGIVLHPLG
HSIYRHPFCAHDTWHLCLYEAHTHKKAGCEEQKCPFHAECFICFHSFSKG
LYGKFLIR

Gene Nucleotide Sequence:  Sequence Viewer

ATGTTCCGGGAGGNCCAGATTGTAGCGGTTTTGCAGCATGTCTACGCCTT
CGATATACATATGTGTGATAGGTTCGCCCTGATATTTGACGAGGCCGTTT
GCCGAGACCTCTATTCCCGGCAATTTGCGCAGCAGATCGGCCAGATACCG
ATCGTCCGGCCCCACGAAAGCCGCAGCCGAATAGGCAATCGTATCTCCCA
GCTTGCGTACCGGTTCGGCGCGTACCACCACTTCCTTGAGCTTGACGTCG
GACGGCACCAAAGCGAAAAGCAGCGGAGGAGCAGCCGCATCGATGGCTTT
GCTCATCTTCCTATACCCCATATATCTTACGCTAAGGAGTTTTCCGCCGG
CTTTTTTCTCCAGAGAGAACGAGCCGTCGGCTTTCGAGAGGACGAAGGCA
AGCGGTTTGCCGGAGGCATCCATGAGTTGGCACACTGCCCCGGCAAGAGG
CTCCTGGCTCTCGGCATCTATCACACGACCGGCAAGCATTTGTCCGGTCG
CTTCCTGAGCAACGACAGGCAACAGCCCCGCCACGCACAGCCACAAATAC
GCCAAAATCGAAGTGACAGCCCTATTCATCATGCTTTATTCCTCCTCCAA
TGGATTAAACGGCTGAGGTGGCAGATGAGAAAAGTCTACCGGTATCGGGG
AATTGACAAAAGCCGGCGAATTGGCCACGACTTCGGCATAATGCTCGTGG
ATATTACGAATCGTTTTGCGCATCTCTTCACGCGAGCCGACTTTCGTAAA
GGCATTTTTCTTGAGATAAATCGGAGACGGAAATGTAATCTCCTGCATTC
CGTTCAATTCGAATACGTACTCTCCGTCATCCGAACCGATAGCGACGATC
AGGCCGGGCAATCCCCGAAAAATGTACGGCCCATCCGAGAGGGCAATATC
CTCGGCATACCAAGCAGTATAATCCCGTCCGCTGTGGTGGCAGGTGGCCT
TTCGGCAAGTGTATTCCATGATCTCCTTGGTCTCTTCCCCGATCTGCCAA
TCGAAAGACGGCGACGGACAACCGTATTCATAAGAACCGACTATCGGATC
TCCGTATTGATGATAATCTTGTCCCGATGGATAGCCTTTAAGTACGGGAG
TCCGCCATTGGGTCTTCTTGACGTAATCATAAGCTTTCGAAAAGATCTCC
ATAGCAGTCCCTTTCTTCCGAGCTACGGCATCATTCACCGAGTCCGCTGC
ATACTCGTAAAAGTCTTTGAAGCAACTCCCTCGCTGCCCTATTTCCAATA
CACACTGTGCTTGGGTTTCTTTGTCTCGCCTCGTGGTATCTTTCACAAAA
GAGACTTTGTAAAAAAATCGCCGTTTGGTATAGTCCTCCACCCTCTTGGG
CACAGTATCTACCGGCATCCCTTCTGCGCCCACGATACGTGGCACCTGTG
CCTGTATGAAGCTCATACTCATAAAAAAGCAGGATGCGAGGAACAAAAGT
GTCCTTTTCATGCTGAGTGTTTTATTTGTTTTCATTCTTTCTCCAAGGGA
TTGTACGGCAAATTTCTGATACGC








    

      
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