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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0341 IGR0337 IGR0342 IGR0339 IGR0340 IGR0338 PG0404.2 PG0400 PG0403 PG0402 PG0401 PG0405 pepT, - PG0407 PG0406 PG0404 PG0404.2 PG0400 PG0403 PG0402 PG0401 PG0405 pepT, - PG0407 PG0406 PG0404 Type: tandem, Name: tan60 - 268 PG0400 PG0403 PG0404.1 PG0404.2 PG0404.1 PG0402 PG0401 PG0405 pepT, - PG0407 PG0406 PG0404


LANL Gene ID: PG0404.1

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Periplasm [Evidence]

Gene Start:
481867

Gene Stop:
481505

Gene Length:
363

Molecular Weight*:
13419

pI*:


Net Charge*:


EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No hit found in gapped BLAST.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan
























noIPR
unintegrated		






unintegrated





signalp
[1-35]? NA signalp signal-peptide
signal-peptide












COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
Residues 40 to 68 share 62% identity with PG0612.1

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
Feature Type  Start  Stop
No predicted structural features.  
  
transmembrane  
3  
19

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

MHLMILLPKFLAAGMHCVILSTKFLAASLQKVCLATKLLIAACRKRFCCR
NSCLQLAGSDFVAEIHVCRSDSMNFVAKISPCIAAASNFVDEITRRKEKS
YRNSERISIRSSAAIPNKENQ

Gene Nucleotide Sequence:  Sequence Viewer

ATGCATTTGATGATTTTGTTGCCGAAATTCCTTGCCGCAGGTATGCATTG
TGTAATTTTGTCGACGAAATTCCTTGCTGCAAGCTTGCAAAAGGTCTGCT
TGGCAACAAAATTGCTTATTGCAGCTTGCAGGAAGCGATTTTGTTGCCGA
AATTCATGTTTGCAGCTTGCAGGAAGCGATTTTGTTGCCGAAATTCATGT
TTGCAGGTCGGATTCTATGAATTTTGTTGCCAAGATTTCGCCTTGCATAG
CTGCAGCGAGTAATTTCGTCGACGAAATTACTCGCCGAAAAGAAAAATCG
TACCGAAATTCAGAAAGAATCTCAATACGATCCTCGGCAGCTATACCGAA
TAAAGAAAATCAG








    

      
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