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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0350 IGR0351 IGR0345 IGR0348 IGR0346 IGR0349 IGR0347 PG0415.1 ISPg5, - PG0419 ISPg5, - PG0418 ISPg1, - PG0420 PG0413 PG0415 PG0416 PG0414 PG0415.1 ISPg5, - PG0419 ISPg5, - PG0418 ISPg1, - PG0420 PG0413 PG0415 PG0416 PG0414 Type: IS element, Name: ISPg1 - 2 Type: IS element, Name: ISPg5 - 8 PG0415.1 ISPg5, - PG0419 ISPg5, - PG0418 ISPg1, - PG0420 PG0413 PG0415 PG0416 PG0414 PG0417 PG0417


LANL Gene ID: PG0415.1

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Periplasm, Cytoplasm [Evidence]

Gene Start:
497593

Gene Stop:
497291

Gene Length:
303

Molecular Weight*:
11919

pI*:


Net Charge*:


EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No significant hit found in gapped BLAST with E value less than e-04.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan
























noIPR
unintegrated		






unintegrated





signalp
[1-43]? NA signalp signal-peptide
signal-peptide




tmhmm
[14-34]? NA tmhmm transmembrane_regions
transmembrane_regions












COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
No paralogs found in P. gingivalis.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
Feature Type  Start  Stop
No predicted structural features.  
  

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

LFLNYGSLTYEGCFSFFALYSWCFYPHSVLFFALDRFFSFSSAKAVSEYC
RQRGQTASRLISTLPFHYRSYSCHKPCCHKLLMFYCLETKTTGPMEIRIR
L

Gene Nucleotide Sequence:  Sequence Viewer

TTGTTCCTTAATTACGGCAGTCTCACATACGAAGGCTGTTTTTCATTTTT
TGCTTTATACTCTTGGTGCTTCTATCCACATTCGGTTCTTTTTTTCGCGT
TGGATCGCTTTTTTTCGTTTTCTTCGGCAAAGGCAGTTTCGGAGTACTGC
CGGCAACGAGGTCAAACGGCAAGCCGTTTAATCTCCACACTTCCATTTCA
TTACAGGTCGTATTCTTGCCACAAACCCTGTTGCCATAAGCTCTTAATGT
TTTATTGTCTTGAAACGAAAACGACCGGCCCGATGGAAATACGCATAAGA
TTA








    

      
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