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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0414 IGR0417 IGR0415 IGR0416 IGR0418 PG0494.2 PG0494.3 PG0494.1 czcB, - PG0492 PG0490 PG0495 PG0496 czcA, - PG0493 PG0494.2 PG0494.3 PG0494.1 czcB, - PG0492 PG0490 PG0495 PG0496 czcA, - PG0493 PG0494.2 czcB, - PG0492 PG0490 PG0495 PG0496 czcA, - PG0493 PG0494 PG0494.1 PG0494 PG0494.3


LANL Gene ID: PG0494.1

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Periplasm, Cytoplasm [Evidence]

Gene Start:
595273

Gene Stop:
595590

Gene Length:
318

Molecular Weight*:
12716

pI*:


Net Charge*:


EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No significant hit found in gapped BLAST with E value less than e-04.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan
























InterPro

IPR012456

Family










Protein of unknown function DUF1661





PF07877
[35-64]T 1.2e-06 PF07877 DUF1661
DUF1661








noIPR
unintegrated		






unintegrated





signalp
[1-29]? NA signalp signal-peptide
signal-peptide












COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
PG0494.1 residues 15 to 54 are 55% similar to PG1849.1, a hypothetical protein.  PG0494.1 residues 26 to 57 are 68% similar to PG1803, a hypothetical protein.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
Feature Type  Start  Stop
No predicted structural features.  
  

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

LSRRVPPSSRIRLIYALEFSRLLSHKTWCENFSLLVWEAKNSRATTKKFS
RHFFQRYCCPVKFLQLLTIRKHLQAHYRPMALAVKKVWRMADRATIIRAR
TDRGTR

Gene Nucleotide Sequence:  Sequence Viewer

TTGTCTCGCCGTGTCCCCCCCTCATCTCGCATTCGGCTGATTTACGCTCT
GGAATTTTCTCGTTTACTGTCCCACAAAACGTGGTGTGAGAACTTTTCTC
TTTTGGTCTGGGAAGCAAAAAATTCTCGCGCCACAACGAAAAAGTTCTCG
CGCCACTTTTTTCAGAGATATTGCTGTCCGGTAAAATTTCTTCAGCTACT
CACCATTCGTAAGCATTTGCAAGCCCATTACCGACCGATGGCGTTGGCTG
TGAAGAAAGTCTGGCGTATGGCTGATAGAGCGACAATTATTCGGGCACGT
ACAGATAGAGGAACGAGG








    

      
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