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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0430 IGR0433 IGR0428 IGR0429 IGR0434 IGR0431 IGR0432 PG0509 PG0511 efp,efp1, - PG0512 PG0510 PG0506 PG0507 PG0513 PG0509.1 asd, - PG0514 PG0508 PG0509 PG0511 efp,efp1, - PG0512 PG0510 PG0506 PG0507 PG0513 PG0509.1 asd, - PG0514 PG0508 Type: tandem, Name: tan3 - 211 Type: tandem, Name: tan32 - 240 PG0509 PG0511 efp,efp1, - PG0512 PG0510 PG0506 PG0507 PG0513 PG0509.1 asd, - PG0514 PG0508


LANL Gene ID: PG0509.1

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Cytoplasm [Evidence]

Gene Start:
621498

Gene Stop:
621812

Gene Length:
315

Molecular Weight*:
12507

pI*:


Net Charge*:


EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No significant hits in gapped BLAST.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan
























noIPR
unintegrated		






unintegrated





tmhmm
[39-57]? NA tmhmm transmembrane_regions[76-96]? NA tmhmm transmembrane_regions
transmembrane_regions












COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
No paralogs found in P. gingivalis.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
Feature Type  Start  Stop
No predicted structural features.  
  
transmembrane  
40  
56
transmembrane  
79  
95

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

LTYLSPRHSNNLQKGEVPPRTRHTIFADIGMHYNPFFESVSVVFILRSLF
EVLQCFFEFANKPVQYLHSIFKKMRCYRMCCIFIRCLCLNNFCLLADFDR
NLKCN

Gene Nucleotide Sequence:  Sequence Viewer

TTGACATACTTATCTCCTCGCCATTCCAACAATCTCCAAAAAGGAGAAGT
ACCCCCCCGTACCCGGCATACCATCTTTGCTGATATTGGAATGCATTACA
ACCCATTCTTCGAATCGGTCTCCGTAGTATTTATACTTCGTTCTTTGTTT
GAAGTACTGCAATGCTTCTTTGAGTTCGCCAATAAGCCGGTTCAATATCT
CCATAGTATATTCAAGAAAATGCGATGTTATAGAATGTGTTGCATATTTA
TTCGTTGCCTCTGTCTGAATAACTTCTGTCTCTTAGCTGATTTCGATCGG
AATTTGAAATGCAAT








    

      
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