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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0506 IGR0502 IGR0503 IGR0504 IGR0505 PG0600.1 PG0600 cbiK,ihtB,fetB, - PG0602 PG0597 PG0601 lac, - PG0598 PG0600.1 PG0600 cbiK,ihtB,fetB, - PG0602 PG0597 PG0601 lac, - PG0598 PG0600.1 cbiK,ihtB,fetB, - PG0602 PG0597 PG0601 lac, - PG0598 PG0599 PG0600 PG0599


LANL Gene ID: PG0599

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
conserved hypothetical protein

Cellular Location:
Cytoplasm [Evidence]

Gene Start:
715389

Gene Stop:
715892

Gene Length:
504

Molecular Weight*:
18902

pI*:
4.70

Net Charge*:
-8.80

EC:
 

Functional Class:
Unknown; Conserved hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
Two significant hits in gapped BLAST to conserved hypothetical protein; e.g. residues 4-156 are 61% similar to gb|AAF72522.1|AF248951_3 MdsC protein of Prevotella sp. RS2, residues 7-156 are 32% similar to dbj|BAA17692.1| hypothetical protein of Synechocystis sp.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.
 gi|29349648|ref|NP_813151.1|  conserved hypothetical protein...   243   2e-63
 gi|153807555|ref|ZP_01960223.1|  hypothetical protein BACCAC...   242   5e-63
 gi|156107475|gb|EDO09220.1|  hypothetical protein BACOVA_050...   239   3e-62
 gi|156861914|gb|EDO55345.1|  hypothetical protein BACUNI_010...   239   4e-62
 gi|53712221|ref|YP_098213.1|  hypothetical protein BF0928 [B...   234   2e-60
 gi|8101029|gb|AAF72522.1|AF248951_3  MdsC protein [Prevotell...   190   2e-47
 gi|150004373|ref|YP_001299117.1|  conserved hypothetical pro...   189   7e-47
 gi|123401581|ref|XP_001301892.1|  hypothetical protein TVAG_...   182   7e-45
 gi|150008560|ref|YP_001303303.1|  hypothetical protein BDI_1...   172   7e-42
 gi|154494883|ref|ZP_02033888.1|  hypothetical protein PARMER...   171   1e-41


InterPro Summary:  InterProScan

No hits reported.

COGS Summary:  COGS Search
No hit to the COGs database.
Blocks Summary:  Blocks Search
No significant hit to the Blocks database.

 ProDom Summary:  Protein Domain Search
Residues 7-156 are 32% similar to a (HYPOTHETICAL 42.7 KD PROTEIN) protein domain (PD137281 which is seen in P73647_SYNY3.


Paralogs:  Local Blast Search
No paralogs found in P. gingivalis.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

 Structural Feature(s):
Feature Type  Start  Stop
No predicted structural features.  
  

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:
MKQLNEIVAHFHTEGSVAEIAPLGAGLINDTYKVATAEADAPDYVLQRIN
HTIFKDVEMLQANITAVTAHIRRKLTESGADDIERKVLTLVTSDRDKTYY
YDGENYWRMMVFIPRAQTFEAVTPEYSRYAGQAFGSFQAMLSDLPDELGE
TIPDFHIWSSGSANYTMP

Gene Nucleotide Sequence:  Sequence Viewer
ATGAAGCAACTGAATGAAATAGTAGCACATTTCCACACCGAGGGAAGCGT
GGCAGAGATCGCACCCTTAGGTGCCGGTCTTATCAATGACACTTACAAGG
TGGCAACAGCCGAAGCCGATGCACCTGACTACGTTTTGCAACGAATCAAT
CACACCATATTCAAAGATGTGGAAATGCTACAGGCCAATATTACGGCTGT
AACGGCACACATCCGGCGCAAGCTGACCGAATCGGGAGCCGATGACATCG
AACGGAAAGTGCTCACCCTCGTCACAAGCGATAGGGACAAGACATATTAT
TACGATGGAGAAAACTATTGGAGGATGATGGTTTTTATTCCCCGAGCACA
AACCTTCGAGGCGGTAACACCCGAATATTCACGGTATGCGGGACAAGCAT
TCGGCAGCTTCCAAGCCATGCTGTCGGACTTACCGGACGAACTGGGCGAA
ACCATTCCCGACTTTCATATATGGAGTTCAGGCTCGGCCAATTACACGAT
GCCT

Los Alamos National Laboratory • Est 1943

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