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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0506 IGR0503 IGR0507 IGR0504 IGR0505 PG0600.1 PG0600 cbiK,ihtB,fetB, - PG0602 PG0603 PG0601 lac, - PG0598 PG0600.1 PG0600 cbiK,ihtB,fetB, - PG0602 PG0603 PG0601 lac, - PG0598 PG0600.1 cbiK,ihtB,fetB, - PG0602 PG0603 PG0601 lac, - PG0598 PG0599 PG0600 PG0599


LANL Gene ID: PG0600.1

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Cytoplasm [Evidence]

Gene Start:
717138

Gene Stop:
716872

Gene Length:
267

Molecular Weight*:
9993

pI*:


Net Charge*:


EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No significant hits.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan
























noIPR
unintegrated		






unintegrated





signalp
[1-38]? NA signalp signal-peptide
signal-peptide




tmhmm
[21-41]? NA tmhmm transmembrane_regions
transmembrane_regions












COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
No paralogs found in P. gingivalis.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
Feature Type  Start  Stop
No predicted structural features.  
  
uncleavable signal  
1  
26
transmembrane  
17  
33

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

MNVKHSTGLSHLNSCTVSLVSFFSLTHLFVLILDGALSGLYVCLLFHPSE
RIYLSPVSSPQHETFEKRVIYKGLFSSSYPPSRPHTTRE

Gene Nucleotide Sequence:  Sequence Viewer

ATGAACGTTAAGCACAGTACAGGGCTATCGCATTTGAATAGTTGTACTGT
ATCCTTGGTCTCTTTCTTCTCTCTAACACATTTATTCGTGCTTATTTTGG
ACGGAGCACTATCAGGCTTATATGTGTGTTTATTGTTCCATCCATCGGAG
AGGATATACTTATCACCAGTCTCTTCTCCACAGCATGAGACCTTTGAAAA
ACGGGTGATTTATAAAGGGTTGTTTTCCAGTTCGTACCCCCCTTCTCGTC
CGCACACTACAAGGGAA








    

      
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