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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap tRNA-Arg-1 IGR0572 IGR0570 IGR0569 IGR0568 IGR0573 IGR0571 IGR0567 PG0679.1 porT, - PG0677 wcfJ, - PG0676 PG0682 truA, - PG0681 prtQ, - PG0679 top1,topA, - PG0680 PG0679.1 porT, - PG0677 wcfJ, - PG0676 PG0682 truA, - PG0681 prtQ, - PG0679 top1,topA, - PG0680 porT, - PG0677 wcfJ, - PG0676 PG0682 PG0679.2 PG0679.1 PG0679.2 truA, - PG0681 prtQ, - PG0679 top1,topA, - PG0680 upp, - PG0678 upp, - PG0678


LANL Gene ID: PG0679.1

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Cytoplasm, Periplasm [Evidence]

Gene Start:
800747

Gene Stop:
800397

Gene Length:
351

Molecular Weight*:
13503

pI*:


Net Charge*:


EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
GTG valine start.

NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No hits found.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan
























InterPro

IPR012456

Family










Protein of unknown function DUF1661





PF07877
[1-29]T 0.00023 PF07877 DUF1661
DUF1661












COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
No paralogs found in P. gingivalis.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
Feature Type  Start  Stop
No predicted structural features.  
  

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

VARKIFTSHAKTKKFPSHVFPNAKPPFLRTDVYGIGEVKKSSNHVETFDL
FRASSHCGRIPRQPRSKYAIKKKYNIAQRLIRDHCTAFCDMTIGLFLRRT
DVYIQMGYEHGIPSSDF

Gene Nucleotide Sequence:  Sequence Viewer

GTGGCGCGTAAAATTTTTACTTCCCACGCCAAAACGAAAAAATTCCCGAG
CCACGTTTTTCCAAACGCTAAACCGCCATTTTTACGAACTGACGTGTACG
GAATCGGAGAGGTCAAAAAAAGCAGTAATCATGTCGAAACATTTGACCTA
TTCCGAGCGTCTTCACATTGTGGAAGAATACCTCGGCAGCCCCGGAGCAA
GTATGCCATCAAGAAGAAGTACAACATCGCCCAGAGGCTTATTAGAGACC
ATTGCACGGCATTTTGCGATATGACCATTGGTCTTTTCTTACGTCGAACT
GACGTCTATATACAAATGGGCTATGAACATGGAATACCATCATCCGATTT
C








    

      
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