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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap tRNA-Arg-1 IGR0572 IGR0570 IGR0569 IGR0568 IGR0573 IGR0571 IGR0567 PG0679.1 porT, - PG0677 wcfJ, - PG0676 PG0682 truA, - PG0681 prtQ, - PG0679 top1,topA, - PG0680 PG0679.1 porT, - PG0677 wcfJ, - PG0676 PG0682 truA, - PG0681 prtQ, - PG0679 top1,topA, - PG0680 porT, - PG0677 wcfJ, - PG0676 PG0682 PG0679.2 PG0679.1 PG0679.2 truA, - PG0681 prtQ, - PG0679 top1,topA, - PG0680 upp, - PG0678 upp, - PG0678


LANL Gene ID: PG0679.2

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
conserved hypothetical protein

Cellular Location:
Cytoplasm [Evidence]

Gene Start:
800749

Gene Stop:
800477

Gene Length:
273

Molecular Weight*:
10592

pI*:


Net Charge*:


EC:
 

Functional Class:
Unknown; Conserved hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
TTG leucine start.

NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
Gapped BLAST shows residues 44-91 are 33% similar to an unknown (orf1) P.gingivalis protein, gb|AAF69127.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan

No hits reported.

COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
Paralogous to PG1229.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
















Feature Type  Start  Stop
No predicted structural features.  
  

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

LWRVKFLLPTPKRKNSRATFFQTLNRHFYELTCTESERSKKAVIMSKHLT
YSERLHIVEEYLGSPGASMPSRRSTTSPRGLLETIARHFAI

Gene Nucleotide Sequence:  Sequence Viewer

TTGTGGCGCGTAAAATTTTTACTTCCCACGCCAAAACGAAAAAATTCCCG
AGCCACGTTTTTCCAAACGCTAAACCGCCATTTTTACGAACTGACGTGTA
CGGAATCGGAGAGGTCAAAAAAAGCAGTAATCATGTCGAAACATTTGACC
TATTCCGAGCGTCTTCACATTGTGGAAGAATACCTCGGCAGCCCCGGAGC
AAGTATGCCATCAAGAAGAAGTACAACATCGCCCAGAGGCTTATTAGAGA
CCATTGCACGGCATTTTGCGATA








    

      
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