LANL Gene ID: PG0730
GenBank Locus Tag: PG0812
DNA Molecule Name:
1
Genomic Island ID:
7
GenBank ID:
Gene Name:
ISPg1
Definition:
ISPg1 fragment
Cellular Location:
Periplasm, Cytoplasm [Evidence]
Gene Start:
873982
Gene Stop:
873740
Gene Length:
243
Molecular Weight*:
9447
pI*:
11.20
Net Charge*:
11.03
EC:
Functional Class:
Transposon functions
Gene Ontology:
Biological process
GO:0006313 transposition, DNA-mediated
Molecular function
GO:0003677 DNA binding
GO:0004803 transposase activity
Pathway: pathway table
Primary Evidence:
Hanley,S.A., Aduse-Opoku,J. and Curtis,M.A.
A 55-kilodalton immunodominant antigen of Porphyromonas gingivalis
W50 has arisen via horizontal gene transfer
Infect. Immun. 67 (3), 1157-1171 (1999)
Maley,J. and Roberts,I.S.
Characterisation of IS1126 from Porphyromonas gingivalis W83: a new member of the IS4 family of insertion sequence elements
Microbiol. Lett. 123 (1-2), 219-224 (1994)
Shibata,Y., Hayakawa,M., Takiguchi,H., Shiroza,T. and Abiko,Y.
Determination and characterization of the hemagglutinin-associated
short motifs found in Porphyromonas gingivalis multiple gene
products. J. Biol. Chem. 274 (8), 5012-5020 (1999)
Comment:
Member of the IS5 family of elements. Equivalent to the C-terminal domain of full-length ISPg1 sequences such as PG1662.
TIGR ID: PG0812
Human Oral Microbiome Database:
View in HOMD Genome Viewer
Blast Summary: PSI-Blast Search
Residues 11-76 are 63% similar to residues 291-356 of the previously sequenced transposase (AJ130872) from P.gingivalis.
Top Blast Hits: Updated monthly
Click here to view the entire PsiBlast results.
InterPro Summary: InterProScan
| InterPro IPR002559 Domain 
|
| |||||||
![[24-68]T 3.5e-07 PF01609 Transposase_11](http://www.ebi.ac.uk/InterProScan/images/H.gif){kind=small}
COGS Summary: COGS Search
No hit to the COGs database.
Blocks Summary: Blocks Search
No significant hit to the Blocks database.
ProDom Summary: Protein Domain Search
Residues 24-76 are 71% similar to a (TRANSPOSASE ORF7 INSERTION SEQUENCE) protein domain (PD187845 which is seen in Q9ZA61_PORGI.
Paralogs: Local Blast Search
PG0730 is similar to the C-terminal regions of PG0044, PG0169, PG0740, PG1798, PG1755, PG1662, PG1422, PG1267, PG1230, PG1184, PG1087, PG1062, PG1050, PG0918, PG0763, PG0756, PG0686, PG1231, PG0883, PG0689, PG0499, PG0420, PG1895, PG1665, PG1215, PG0839, PG1159, PG1608, PG1919, all ISPg1-related sequences.
Pfam Summary: Pfam Search
No significant hits to the Pfam 11.0 database
Structural Feature(s):
| Feature Type | Start | Stop |
| No predicted structural features. |
Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).
Gene Protein Sequence:
MELCSRLIEVKSSSESQKQLNRMISKTRCLIERTFGSIRRWFCGGRCRYR
ELAKTHTRNILEAMAYNLKRMPGLLVLQGAK
Gene Nucleotide Sequence: Sequence Viewer
ATGGAATTATGCTCAAGGCTCATCGAGGTCAAGTCCTCAAGTGAAAGTCA
AAAACAACTCAATCGGATGATCAGTAAGACGCGCTGCTTGATAGAACGTA
CCTTCGGTAGTATTCGACGATGGTTCTGTGGCGGACGATGTCGCTATCGA
GAGTTAGCCAAGACACATACCCGGAATATCCTTGAAGCTATGGCCTACAA
TCTCAAGCGTATGCCGGGGCTTCTTGTGCTTCAAGGCGCAAAA