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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0638 IGR0637 IGR0631 IGR0634 IGR0632 IGR0630 IGR0636 IGR0629 IGR0633 IGR0635 PG0744.1 PG0747.1 PG0744 PG0746 ISPg1, - PG0740 PG0748 PG0747 PG0745.1 rteC, - PG0743 PG0745 PG0741 PG0742 PG0744.1 PG0747.1 PG0744 PG0746 ISPg1, - PG0740 PG0748 PG0747 PG0745.1 rteC, - PG0743 PG0745 PG0741 PG0742 Type: IS element, Name: ISPg1 - 2 Type: tandem, Name: tan6 - 214 PG0744.1 PG0744 PG0746 ISPg1, - PG0740 PG0748 PG0747 PG0747.1 PG0745.1 PG0745 PG0741 PG0742 PG0742.1 rteC, - PG0743 PG0742.1


LANL Gene ID: PG0744.1

GenBank Locus Tag:

DNA Molecule Name:
1  

Genomic Island ID:
7

GenBank ID:


 Gene Name:


 Definition:
hypothetical protein

 Cellular Location:
Cytoplasm [Evidence]

 Gene Start:
887513

Gene Stop:
887148

Gene Length:
366

Molecular Weight*:
13926

pI*:


Net Charge*:


EC:
 

 Functional Class:
Unknown; Hypothetical  

 Gene Ontology:

Pathway: pathway table

 Comment:
PG0744.1 lies just 3' of a long 9927 bp region containing 9 orfs which is repeated with >99% similarity (9915 bp identical out of 9927) on the opposite strand. PG0738 to PG0744 have paralogs PG1269 to PG1263. The 102 carboxyl residues of PG0744 have 78% similarity to PG1262.1 and PG0744.1 may belong to that repeat region.

NO TIGR ID corresponds to this gene.

 Human Oral Microbiome Database:
View in HOMD Genome Viewer

 Blast Summary:  PSI-Blast Search
No significant hits found.

 Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan













noIPR
unintegrated		






unintegrated





signalp
[1-17]? NA signalp signal-peptide
signal-peptide




tmhmm
[101-119]? NA tmhmm transmembrane_regions
transmembrane_regions












COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
The 102 carboxyl residues of PG0744 have 78% similarity to PG1262.1.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
Feature Type  Start  Stop
No predicted structural features.  
  

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

LFISLPVYLPMKMNTSAIEDMPNNRLVPVGLHPFIHTLSVEMFISVHQYN
RSIVSAFAHSHVRVKESRTCSLTYTLAYIAHRNVMLSKTHTITDIFDSAN
IWFGDAVISVISFSAYLWHRFG

Gene Nucleotide Sequence:  Sequence Viewer

TTGTTCATTTCGTTGCCAGTATATTTACCGATGAAGATGAATACATCCGC
TATCGAAGATATGCCCAATAATCGGCTTGTACCAGTAGGGCTACATCCTT
TCATTCATACCCTTTCTGTGGAGATGTTCATTAGTGTCCATCAATACAAT
CGTTCGATTGTATCTGCCTTCGCACATTCCCACGTTCGAGTGAAAGAATC
AAGGACATGTTCTTTGACATACACCCTCGCCTATATCGCTCATCGAAACG
TGATGTTATCGAAGACACATACCATCACCGACATATTCGACAGTGCAAAT
ATATGGTTCGGTGATGCTGTAATCAGCGTGATTTCCTTTAGTGCGTACTT
GTGGCATCGATTTGGA








    

      
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