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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0642 IGR0641 IGR0640 IGR0639 PG0750.1 PG0749 PG0748 intN2, - PG0750 PG0752 PG0750.1 PG0749 PG0748 intN2, - PG0750 PG0752 PG0750.1 PG0749 PG0748 intN2, - PG0750 PG0752 PG0751 PG0751


LANL Gene ID: PG0750.1

GenBank Locus Tag:

DNA Molecule Name:
1  

Genomic Island ID:
7

GenBank ID:


 Gene Name:


 Definition:
hypothetical protein

 Cellular Location:
Periplasm, Extracellular [Evidence]

 Gene Start:
897292

Gene Stop:
897017

Gene Length:
276

Molecular Weight*:
9884

pI*:


Net Charge*:


EC:
 

 Functional Class:
Unknown; Hypothetical  

 Gene Ontology:

Pathway: pathway table

 Comment:
NO TIGR ID corresponds to this gene.

 Human Oral Microbiome Database:
View in HOMD Genome Viewer

 Blast Summary:  PSI-Blast Search
No hit found in gapped BLAST.

 Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan













noIPR
unintegrated		






unintegrated





PS51257
[1-22]T 6.000 PS51257 PROKAR_LIPOPROTEIN
PROKAR_LIPOPROTEIN




signalp
[1-23]? NA signalp signal-peptide
signal-peptide




tmhmm
[10-30]? NA tmhmm transmembrane_regions
transmembrane_regions












COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
No paralogs found in P. gingivalis.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
Feature Type  Start  Stop
No predicted structural features.  
  
cleavable signal  
1  
23
gram negative signal  
1  
26

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

MYATKEKCTSVSLVICFIISSCAIMSYSLYFRIKARGSCIVLQRASKWLK
TSSTGEFIKALLPLAPSTTQRINAGEGGSELDTASAQDTARG

Gene Nucleotide Sequence:  Sequence Viewer

ATGTACGCTACCAAAGAAAAATGTACGTCGGTAAGTTTAGTCATTTGTTT
TATAATATCCTCTTGCGCTATCATGTCCTATTCTTTATACTTTAGAATTA
AAGCAAGAGGCTCTTGCATAGTTTTGCAGAGAGCCTCTAAATGGCTCAAA
ACCAGCTCTACAGGAGAATTTATCAAAGCCTTATTGCCCTTAGCACCATC
AACGACTCAGCGAATTAACGCAGGTGAAGGAGGTTCCGAGCTGGACACAG
CGTCTGCTCAGGATACGGCGAGGGGA








    

      
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