Basic Search | Intermediate Search | Advanced Search | Gene Image Map |  Sequence Search |  Protein Motif Search |  Repeat Search |  DNA/RNA Motif Search |  Home

Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0665 IGR0667 IGR0669 IGR0664 IGR0663 IGR0668 IGR0670 IGR0666 mocB, - PG0779 xis, - PG0782 PG0777 PG0783 tnpA, - PG0785 mocA, - PG0778 PG0780 ipxH, - PG0784 PG0781 thdF, - PG0786 PG0782.1 mocB, - PG0779 xis, - PG0782 PG0777 PG0783 tnpA, - PG0785 mocA, - PG0778 PG0780 ipxH, - PG0784 PG0781 thdF, - PG0786 PG0782.1 mocB, - PG0779 xis, - PG0782 PG0783 tnpA, - PG0785 mocA, - PG0778 PG0780 ipxH, - PG0784 PG0781 thdF, - PG0786 PG0777 PG0782.1


LANL Gene ID: PG0782.1

GenBank Locus Tag:

DNA Molecule Name:
1  

Genomic Island ID:
7

GenBank ID:


 Gene Name:


 Definition:
hypothetical protein

 Cellular Location:
Cytoplasm, Periplasm [Evidence]

 Gene Start:
935559

Gene Stop:
936161

Gene Length:
603

Molecular Weight*:
23588

pI*:


Net Charge*:


EC:
 

 Functional Class:
Unknown; Hypothetical  

 Gene Ontology:

Pathway: pathway table

 Comment:
NO TIGR ID corresponds to this gene.

 Human Oral Microbiome Database:
View in HOMD Genome Viewer

 Blast Summary:  PSI-Blast Search
No significant hit found in gapped BLAST with E value less than e-04.

 Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan













noIPR
unintegrated		






unintegrated





signalp
[1-25]? NA signalp signal-peptide
signal-peptide




tmhmm
[5-25]? NA tmhmm transmembrane_regions
transmembrane_regions












COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
No paralogs found in P. gingivalis.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
Feature Type  Start  Stop
No predicted structural features.  
  
cleavable signal  
1  
16

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

MEWINNLIGFGLGVLASWIVWFVVSRCIVPRIEFSKYLSRTQPNYQDNPL
YRFRLRNKGRRQVIDIDIFFRIRIKGINPRFPDTWEIIRIPLGNPYNHIP
FLPAPSKSKYASQTISIEAGSCEKFSRSFMPEDIRKKYHKKTLTLDDVFS
ITEEVEGEVIAFGYDEFSGARKMFRSKKYKKGDIRDGRFKHNCMSIESAS
E

Gene Nucleotide Sequence:  Sequence Viewer

ATGGAATGGATTAATAATTTAATTGGTTTTGGATTGGGTGTATTGGCATC
ATGGATTGTTTGGTTTGTAGTAAGTAGGTGTATTGTTCCTCGAATTGAAT
TCTCCAAATATCTTAGCAGAACACAACCTAACTATCAAGACAACCCTTTG
TACAGATTTCGCCTACGCAACAAAGGTCGAAGACAGGTTATAGACATTGA
CATTTTTTTTCGCATAAGAATCAAAGGAATAAACCCCAGGTTTCCAGACA
CATGGGAAATTATTCGAATTCCCCTGGGAAACCCTTACAATCATATACCT
TTCCTTCCTGCTCCAAGCAAATCTAAATATGCTAGTCAGACTATATCCAT
TGAAGCTGGTTCTTGTGAAAAATTTTCCAGATCATTCATGCCAGAGGATA
TTAGAAAAAAGTACCACAAAAAAACTCTTACTCTAGATGATGTATTCTCT
ATCACAGAAGAAGTAGAAGGAGAAGTGATTGCTTTTGGATATGATGAATT
TAGTGGAGCGAGAAAGATGTTCCGTTCTAAGAAATACAAAAAGGGAGATA
TTAGAGATGGAAGATTTAAACACAACTGCATGAGCATTGAATCTGCAAGC
GAA








    

      
 Los Alamos National Laboratory • Est 1943 
    

    


Operated by Los Alamos National
    Security, LLC for the U.S. Department
    of Energy's National Nuclear Security Administration


Inside | © Copyright
2006 LANS LLC All rights reserved | Disclaimer/Privacy