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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0750 IGR0753.1 IGR0752 IGR0754 IGR0749 IGR0753 IGR0751 IGR0755 IGR0756 rl35, - PG0886.1 PG0879 ISPg2, - PG0889 rl20, - PG0886 ISPg1, - PG0883 ISPg1, - PG0884 infC, - PG0887 PG0881 thrS, - PG0888 PG0880 PG0885 PG0882 PG0878 rl35, - PG0886.1 PG0879 ISPg2, - PG0889 rl20, - PG0886 ISPg1, - PG0883 ISPg1, - PG0884 infC, - PG0887 PG0881 thrS, - PG0888 PG0880 PG0885 PG0882 PG0878 Type: IS element, Name: ISPg1 fragment - 3 PG0879 ISPg2, - PG0889 rl20, - PG0886 ISPg1, - PG0883 ISPg1, - PG0884 infC, - PG0887 PG0881 thrS, - PG0888 rl35, - PG0886.1 PG0885 PG0882 PG0878 PG0879.1 PG0880 PG0879.1


LANL Gene ID: PG0885

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Cytoplasm [Evidence]

Gene Start:
1050236

Gene Stop:
1050913

Gene Length:
678

Molecular Weight*:
26833

pI*:
10.40

Net Charge*:
17.25

EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No significant hits in gapped BLAST.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.
 gi|34540694|ref|NP_905173.1|  calcium-transporting ATPase [P...    89   2e-16


InterPro Summary:  InterProScan

noIPR
unintegrated
unintegrated
tmhmm [21-39]? NA tmhmm transmembrane_regions transmembrane_regions


COGS Summary:  COGS Search
No hit to the COGs database.
Blocks Summary:  Blocks Search
No significant hit to the Blocks database.

 ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
Residues 68-111 of PG0885 show strong similarity (81-93%) to
the amino terminal ~44 residues of:
PG0169.1
PG0685
PG0838 calcium ion-transporting ATPase
PG1086
PG1229
PG1100
PG1895.1.


Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

 Structural Feature(s):
Feature Type  Start  Stop
transmembrane  
27  
44

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:
LTQERVFHAISAKLSVYLQKAWCRFSLFGCHIYALVYTCKILNIIDIRKQ
CRQICRKNAVQWSLEELVQVAPQGGGYNYFHSLLPPLSLAPFMPRTPLPS
TSLFCKGLQMYAWERKGWGQHKTWFSIQMKPRYFYLDLRPSYIFPAQHYV
FRMHMREIKKDVSKSFRHIFFILLYQHLNERCGKRLVFYFSHNSSESFGV
VHRQIGENFAIDFDTICMESTHQARI

Gene Nucleotide Sequence:  Sequence Viewer
TTGACGCAGGAAAGAGTGTTTCATGCGATCTCTGCGAAGCTGAGTGTATA
CTTGCAGAAAGCTTGGTGCCGATTCAGTTTGTTTGGTTGCCATATTTATG
CTCTTGTTTATACGTGTAAAATACTAAATATCATTGATATACGCAAGCAA
TGCAGGCAAATATGTCGCAAAAATGCCGTGCAATGGTCTCTTGAGGAGCT
CGTGCAAGTAGCTCCTCAAGGGGGGGGTTACAACTACTTTCACTCCTTAC
TGCCACCCCTTTCACTCGCTCCTTTTATGCCAAGAACTCCTCTTCCCTCC
ACCTCCTTATTTTGCAAAGGTCTCCAAATGTATGCCTGGGAGAGGAAAGG
GTGGGGGCAGCATAAGACCTGGTTTTCTATTCAAATGAAGCCACGCTATT
TCTATCTTGACCTGAGACCATCGTACATCTTCCCTGCACAGCACTATGTT
TTTAGAATGCATATGCGTGAAATAAAAAAAGATGTGTCAAAATCTTTTCG
ACACATCTTCTTTATATTGCTTTACCAGCACCTCAATGAGAGGTGTGGCA
AGCGTTTAGTTTTTTACTTTAGCCACAATAGCTCTGAAAGCTTCGGGGTG
GTTCATCGCCAAATCGGCGAGAACTTTGCGATTGATTTCGATACCATTTG
CATGGAGAGCACCCATCAGGCGAGAATA

Los Alamos National Laboratory • Est 1943

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