LANL Gene ID: PG0986
GenBank Locus Tag: PG1107
DNA Molecule Name:
1
Genomic Island ID:
10
GenBank ID:
34540840
Gene Name:
Definition:
hypothetical protein
Cellular Location:
Outer membrane, Cytoplasm [Evidence]
Gene Start:
1178903
Gene Stop:
1180309
Gene Length:
1407
Molecular Weight*:
54733
pI*:
9.10
Net Charge*:
11.05
EC:
Functional Class:
Hypothetical
Gene Ontology:
Pathway: pathway table
Primary Evidence:
Zhang Y, Wang T, Chen W, Yilmaz O, Park Y, Jung IY, Hackett M, Lamont RJ.
Differential protein expression by Porphyromonas gingivalis in response to secreted epithelial cell components.
Proteomics. 2005 Jan;5(1):198-211.
PMID: 15619293
Chen T, Hosogi Y, Nishikawa K, Abbey K, Fleischmann RD, Walling J, Duncan MJ.
Comparative whole-genome analysis of virulent and avirulent strains of Porphyromonas gingivalis.
J Bacteriol. 2004 Aug;186(16):5473-9.
PMID: 15292149
Comment:
TIGR ID: PG1107
Human Oral Microbiome Database:
View in HOMD Genome Viewer
Blast Summary: PSI-Blast Search
This sequence corresponds to 34397154 in Genbank.
Top Blast Hits: Updated monthly
Click here to view the entire PsiBlast results.
InterPro Summary: InterProScan
No hits reported.
COGS Summary: COGS Search
No hit to the COGs database.
Blocks Summary: Blocks Search
No significant hit to the Blocks database.
ProDom Summary: Protein Domain Search
No significant hit to the ProDom database.
Paralogs: Local Blast Search
No paralogs found in P. gingivalis.
Pfam Summary: Pfam Search
No significant hits to the Pfam 11.0 database
Structural Feature(s):
| Feature Type | Start | Stop |
| non-globular | ||
| transmembrane |
Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).
Gene Protein Sequence:
LTSFISVYLKIKYYICIYKGNLLVKSILLESSCVILIKYSAQYPNLSNSM
IKMNKTISDVDFDDEQEIKLPLSNRQSIAILLGAGFSAPKGYPIGNDINK
KIQNFDDSNIDFSPSGMLAISKDGHKPLFQIEGVRNIHQKYFIFCKRLIN
EYTKAHSNQFDYEQFYDFIKSDEAKDNRYRLLCQDLINKSDDYDNYLFNV
VHIYNQMVLYLLKDKEGKSYYDGEPFKVNCADAYNEFLLYLSQQSKECII
NIHTLNHDLLIESFNQTSNINGNISDGFDEYGSEYYGILEHDHRNYNCRL
ERYTGRYNTPIRLYKLHGSIDYVPFYRRDKNGFMKPEKYVKIKWGIGASN
IIKGRKSKYGYDASPFEYHADFLTGTTSKIKRYDETLLFKKLFKKFRNNL
SKANSLIIIGYGCKDKGINEMIKDNFDYKNKPSFIIDKYAGASVETFAQK
INAKIIKESIERLDKTWFV
Gene Nucleotide Sequence: Sequence Viewer
TTGACCAGCTTTATTTCTGTATATTTAAAAATAAAATATTACATTTGCAT
ATATAAAGGAAATCTCCTCGTAAAAAGTATTTTATTGGAATCTTCGTGTG
TTATTTTAATTAAATATAGTGCACAATATCCTAATTTAAGCAATAGTATG
ATTAAGATGAATAAAACTATTTCGGATGTTGATTTTGATGATGAACAAGA
AATCAAACTCCCTTTGTCTAATAGACAATCAATAGCAATTCTATTAGGTG
CAGGTTTTTCAGCCCCTAAAGGTTATCCGATTGGCAATGATATAAACAAA
AAAATACAAAACTTTGATGATAGTAATATTGATTTTTCTCCTTCTGGCAT
GTTGGCTATTTCAAAAGATGGACATAAACCTCTTTTTCAAATTGAAGGAG
TGCGCAATATCCATCAAAAATACTTTATCTTTTGTAAACGCCTTATAAAT
GAATATACAAAAGCGCATAGCAATCAATTTGACTATGAACAATTTTATGA
TTTCATAAAGAGTGACGAAGCAAAAGATAACCGTTATCGACTTTTATGTC
AAGATTTAATAAATAAGTCTGATGACTATGACAACTATCTTTTCAATGTT
GTGCATATTTACAACCAAATGGTTTTGTATTTATTGAAAGATAAAGAAGG
AAAGAGTTATTATGACGGTGAACCTTTCAAAGTAAATTGTGCAGATGCCT
ATAATGAATTTCTTTTATATCTATCCCAGCAAAGTAAGGAATGTATCATA
AACATACATACATTAAACCATGATTTACTTATTGAATCTTTTAACCAAAC
AAGTAATATAAATGGTAATATATCAGATGGGTTTGATGAATACGGGTCTG
AGTATTATGGCATACTCGAACATGACCATAGAAACTACAATTGTCGATTA
GAAAGATATACAGGTAGGTACAATACACCGATAAGACTATATAAACTTCA
TGGAAGTATTGACTATGTACCTTTCTATCGAAGAGATAAAAATGGTTTTA
TGAAACCAGAGAAATATGTCAAAATAAAATGGGGAATAGGAGCGAGCAAT
ATTATCAAAGGTAGAAAATCCAAATATGGTTATGATGCCTCACCATTTGA
ATATCATGCAGATTTTCTGACAGGTACCACATCAAAGATTAAAAGGTATG
ATGAAACCCTGCTTTTCAAGAAGCTTTTTAAGAAATTCAGAAATAACTTA
TCAAAAGCAAACTCCTTGATTATCATTGGATATGGTTGTAAAGATAAAGG
AATAAATGAAATGATAAAGGACAATTTCGATTACAAAAATAAACCTTCAT
TCATTATCGACAAGTATGCAGGTGCCTCCGTTGAAACATTCGCTCAAAAA
ATTAATGCTAAAATTATTAAGGAATCTATAGAGAGATTAGATAAAACATG
GTTTGTT