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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0861 IGR0857 IGR0860 IGR0863 IGR0859 IGR0855 IGR0862 IGR0858 IGR0856 PG1005 PG1006 rluB, - PG1003 uraA, - PG1007 purB, - PG1004 asnS, - PG1002 clpB, - PG1000 PG1003.1 asnC, - PG1008 PG1001 xseA, - PG1009 PG1005 PG1006 rluB, - PG1003 uraA, - PG1007 purB, - PG1004 asnS, - PG1002 clpB, - PG1000 PG1003.1 asnC, - PG1008 PG1001 xseA, - PG1009 Type: tandem, Name: tan10 - 218 PG1005 PG1006 rluB, - PG1003 uraA, - PG1007 purB, - PG1004 asnS, - PG1002 clpB, - PG1000 PG1003.1 PG1001 xseA, - PG1009 asnC, - PG1008


LANL Gene ID: PG1003.1

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Cytoplasm [Evidence]

Gene Start:
1198845

Gene Stop:
1199123

Gene Length:
279

Molecular Weight*:
10364

pI*:


Net Charge*:


EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No hits in gapped BLAST.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan
























noIPR
unintegrated		






unintegrated





tmhmm
[60-80]? NA tmhmm transmembrane_regions
transmembrane_regions












COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
No paralogs found in P. gingivalis.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
Feature Type  Start  Stop
No predicted structural features.  
  

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

LDVAPTLGVGLKPPPELILDERKGVGFSMCFSEGEISSLLVSAKISRSSV
VIFDRLLLRFYTYNLTVANYGFVFFDSLGYESMKISDSHVIRR

Gene Nucleotide Sequence:  Sequence Viewer

TTGGATGTAGCCCCTACTCTGGGAGTAGGTCTGAAACCTCCGCCTGAACT
CATTCTTGACGAACGGAAAGGCGTAGGTTTTTCTATGTGCTTTTCCGAAG
GAGAAATATCATCCTTGCTCGTATCTGCGAAAATATCGCGTTCTTCAGTT
GTCATCTTTGATAGATTATTGCTTAGATTTTACACATACAACCTCACGGT
TGCAAACTATGGATTTGTCTTTTTTGACTCTTTGGGTTACGAAAGTATGA
AAATTTCAGATTCCCACGTAATTAGAAGG








    

      
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