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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0886 IGR0883 IGR0881 IGR0882 IGR0884 IGR0885 IGR0880 PG1031.1 PG1033 cobD, - PG1037 cbiB,cobD, - PG1036 fadD, - PG1028 PG1031.2 PG1032 PG1034 PG1029 PG1031 PG1031.1 PG1033 cobD, - PG1037 cbiB,cobD, - PG1036 fadD, - PG1028 PG1031.2 PG1032 PG1034 PG1029 PG1031 Type: tandem, Name: tan91 - 299 Type: tandem, Name: tan71 - 279 Type: tandem, Name: tan72 - 280 Type: tandem, Name: tan73 - 281 PG1033 cobD, - PG1037 cbiB,cobD, - PG1036 fadD, - PG1028 PG1031.3 PG1031.1 PG1031.3 PG1032 PG1034 PG1029 PG1031 PG1030 PG1035 PG1030 PG1035 PG1031.2


LANL Gene ID: PG1031.1

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Periplasm [Evidence]

Gene Start:
1234959

Gene Stop:
1234648

Gene Length:
312

Molecular Weight*:
11392

pI*:


Net Charge*:


EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No hits in gapped BLAST.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan
























noIPR
unintegrated		






unintegrated





tmhmm
[31-51]? NA tmhmm transmembrane_regions[57-77]? NA tmhmm transmembrane_regions[82-102]? NA tmhmm transmembrane_regions
transmembrane_regions












COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
No paralogs found in P. gingivalis.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
Feature Type  Start  Stop
No predicted structural features.  
  
transmembrane  
88  
104

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

LACGQFPASALPLPSQDLWPCLLLHSPFSDLWQSLFLQSLDLSLLQSFAL
ASLALSLQQSLASLALSLQLSPAFLASQALSWWWVHSCFFTVCSVLAVST
FFYV

Gene Nucleotide Sequence:  Sequence Viewer

TTGGCGTGCGGGCAATTTCCTGCTTCAGCTTTGCCTTTGCCTTCGCAAGA
TTTGTGGCCGTGCTTGCTCTTGCACTCGCCTTTTTCTGACTTGTGGCAGT
CACTTTTTTTGCAGTCTTTGGATTTGTCCTTGCTACAATCTTTTGCGTTG
GCATCCTTGGCCTTATCCTTACAGCAGTCTTTGGCATCTTTAGCCTTGTC
TTTGCAACTCTCGCCAGCTTTCTTGGCATCACAAGCTTTGTCGTGGTGGT
GGGTGCACTCTTGTTTCTTTACCGTTTGTTCTGTCTTAGCAGTTTCTACT
TTCTTTTACGTT








    

      
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