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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0886 IGR0883 IGR0881 IGR0882 IGR0884 IGR0885 IGR0880 PG1031.1 PG1033 cbiB,cobD, - PG1036 cbiP, - PG1038 PG1031.2 PG1032 PG1034 PG1029 PG1031 PG1031.1 PG1033 cbiB,cobD, - PG1036 cbiP, - PG1038 PG1031.2 PG1032 PG1034 PG1029 PG1031 Type: tandem, Name: tan91 - 299 Type: tandem, Name: tan71 - 279 Type: tandem, Name: tan72 - 280 Type: tandem, Name: tan73 - 281 PG1033 cbiB,cobD, - PG1036 PG1031.3 cobD, - PG1037 cobD, - PG1037 cbiP, - PG1038 PG1031.1 PG1031.3 PG1032 PG1034 PG1029 PG1031 PG1030 PG1035 PG1030 PG1035 PG1031.2


LANL Gene ID: PG1032

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Cytoplasm [Evidence]

Gene Start:
1235150

Gene Stop:
1235752

Gene Length:
603

Molecular Weight*:
23229

pI*:
5.70

Net Charge*:
-3.23

EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No hits in gapped BLAST.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.
 gi|156110708|gb|EDO12453.1|  hypothetical protein BACOVA_019...   281   1e-74
 gi|150009412|ref|YP_001304155.1|  hypothetical protein BDI_2...   279   7e-74
 gi|154493492|ref|ZP_02032812.1|  hypothetical protein PARMER...   278   1e-73
 gi|153807275|ref|ZP_01959943.1|  hypothetical protein BACCAC...   273   3e-72
 gi|88804507|ref|ZP_01120027.1|  hypothetical protein RB2501_...   243   6e-63
 gi|149275727|ref|ZP_01881872.1|  hypothetical protein PBAL39...   239   6e-62
 gi|88711587|ref|ZP_01105675.1|  hypothetical protein FB2170_...   233   4e-60
 gi|150026498|ref|YP_001297324.1|  hypothetical protein FP247...   233   5e-60
 gi|149369272|ref|ZP_01889124.1|  hypothetical protein SCB49_...   232   9e-60
 gi|126662779|ref|ZP_01733778.1|  hypothetical protein FBBAL3...   230   3e-59


InterPro Summary:  InterProScan

No hits reported.

COGS Summary:  COGS Search
No hit to the COGs database.
Blocks Summary:  Blocks Search
No significant hit to the Blocks database.

 ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
No paralogs found in P. gingivalis.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

 Structural Feature(s):
Feature Type  Start  Stop
No predicted structural features.  
  

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:
MTISKLCNRIFGEAIQAYNVTDSVDAPCNNPYRPQTIEHYLFLKNWIDNA
QWHLEDIIRDPNIDPADALVIKRRIDKSNQDRTDLVELIDSYFLDTYKDV
KVLPDATINTESPAWAIDRLSILKLKIHNMRLATERPDADDAHRAKCQEK
LRVLIEQDADLCTAIDQLVDDIAAGRKYMKVYKQMKMYNDPTLNPILLGK
K

Gene Nucleotide Sequence:  Sequence Viewer
ATGACTATCAGCAAGTTGTGCAATAGGATTTTCGGCGAGGCTATTCAGGC
CTATAACGTCACCGACAGCGTAGACGCACCGTGCAACAATCCATATCGGC
CTCAAACGATCGAGCATTATTTGTTTTTGAAGAATTGGATCGATAATGCC
CAGTGGCATCTCGAAGATATTATACGTGATCCCAACATCGATCCGGCTGA
TGCGCTGGTAATCAAACGCCGTATCGACAAATCCAATCAAGACAGAACCG
ATCTGGTGGAGTTGATAGACAGCTATTTTCTCGATACATACAAGGATGTG
AAGGTACTGCCCGATGCTACGATCAACACCGAAAGTCCGGCATGGGCAAT
CGATCGCCTCTCGATACTGAAGCTCAAAATCCACAACATGCGCTTGGCTA
CGGAGCGTCCCGATGCCGACGATGCACACCGTGCCAAATGTCAGGAGAAG
CTCCGAGTGCTTATCGAACAGGATGCTGACCTCTGCACGGCTATCGACCA
GCTTGTGGATGATATTGCAGCCGGTCGCAAGTACATGAAAGTGTACAAGC
AGATGAAAATGTACAACGATCCCACTCTTAATCCGATTCTTTTGGGCAAG
AAG

Los Alamos National Laboratory • Est 1943

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