LANL Gene ID: PG1058
GenBank Locus Tag: PG1187
DNA Molecule Name:
1
Genomic Island ID:
11
GenBank ID:
Gene Name:
ISPg2
Definition:
ISPg2 fragment (PGIS2-related fragment)
Cellular Location:
Cytoplasm [Evidence]
Gene Start:
1269925
Gene Stop:
1269665
Gene Length:
261
Molecular Weight*:
9918
pI*:
4.90
Net Charge*:
-2.86
EC:
Functional Class:
Transposon functions
Gene Ontology:
Pathway: pathway table
Comment:
Member of IS5 family of elements. Corresponds to the N-terminal domains of fullength ISPg2 sequences such as PG1522.
TIGR ID: PG1187
Human Oral Microbiome Database:
View in HOMD Genome Viewer
Blast Summary: PSI-Blast Search
PG1058 is a fragment similar to gb|AAC45368.1, a previously sequenced ISPg2 sequence. Residues 14-72 are 54% similar to residues 7-65 of gb|AAC45368.1.
Top Blast Hits: Updated monthly
Click here to view the entire PsiBlast results.
InterPro Summary: InterProScan
No hits reported.
COGS Summary: COGS Search
No hit to the COGs database.
Blocks Summary: Blocks Search
No significant hit to the Blocks database.
ProDom Summary: Protein Domain Search
Residues 14-72 are 54% similar to a (PUTATIVE TRANSPOSASE) protein domain (PD103322 which is seen in P95492_PORGI.
Paralogs: Local Blast Search
PG1058 is similar to the N-terminal domains of full-length ISPg2 sequences such as PG1522. Similarities also to the N-terminal domains of PG1905, PG1185, PG0775, PG0249, and PG1855, all ISPg2-related sequences.
Pfam Summary: Pfam Search
No significant hits to the Pfam 11.0 database
Structural Feature(s):
| Feature Type | Start | Stop |
| No predicted structural features. | ||
| transmembrane |
Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).
Gene Protein Sequence:
LNESSVMYSVTIGKSLHGLGSTRIENKEVYPLNFLLLIVFLSTLSGDTSW
YEIEDYAEEYEEVLKSRYETLTIVGVRCLPARCRRPA
Gene Nucleotide Sequence: Sequence Viewer
TTGAATGAGTCGTCGGTCATGTATTCAGTCACTATCGGAAAATCTCTTCA
TGGTCTCGGATCCACACGGATAGAGAACAAAGAAGTTTATCCTCTCAACT
TTTTACTCCTGATCGTTTTCCTCTCTACGCTCTCAGGTGATACCTCTTGG
TACGAGATTGAAGATTATGCAGAGGAATACGAAGAAGTGTTGAAAAGCCG
GTACGAAACACTTACGATCGTAGGCGTACGATGCCTTCCTGCACGGTGCA
GGAGACCGGCG