LANL Gene ID: PG1066
GenBank Locus Tag: PG1202
DNA Molecule Name:
1
Genomic Island ID:
11
GenBank ID:
34540915
Gene Name:
Definition:
hypothetical protein
Cellular Location:
Cytoplasm, Outer membrane [Evidence]
Gene Start:
1283107
Gene Stop:
1279688
Gene Length:
3420
Molecular Weight*:
133479
pI*:
5.20
Net Charge*:
-24.80
EC:
Functional Class:
Hypothetical
Gene Ontology:
Pathway: pathway table
Primary Evidence:
Zhang Y, Wang T, Chen W, Yilmaz O, Park Y, Jung IY, Hackett M, Lamont RJ.
Differential protein expression by Porphyromonas gingivalis in response to secreted epithelial cell components.
Proteomics. 2005 Jan;5(1):198-211.
PMID: 15619293
Comment:
TIGR ID: PG1202
Proteomic Data: Proteomic Data Search
| TIGR Annotation | hypothetical protein, GroupK (hypothetical proteins) | ||||||||
| ORF # | PG-PP/PG-PPC1 | PG-PP/PG-PPC2 | |||||||
| Spectral Count | Peptide Intensity | Spectral Count | Peptide Intensity | ||||||
| Pro | qVal | Pro | qVal | Pro | qVal | Pro | qVal | ||
| TIGR | PG1202 | 1.75 | 0.089 | 8.67 | 0.096 | 2.45 | 0.039 | 8.67 | 0.096 |
| LANL | PG1066 | 3.36 | 408.67 | 5.46 | 691.23 | ||||
| Consensus |  | SP1 | | IP1 | | SP2 | | IP2 |  |
Human Oral Microbiome Database:
View in HOMD Genome Viewer
Blast Summary: PSI-Blast Search
This sequence corresponds to 34397230 in Genbank.
Top Blast Hits: Updated monthly
Click here to view the entire PsiBlast results.
InterPro Summary: InterProScan
| noIPR unintegrated |
| |||||||
![[114-594]T 1.3999999999999999E-11 SSF48439 Prenyl_trans](http://www.ebi.ac.uk/InterProScan/images/B.gif){kind=small}
COGS Summary: COGS Search
BeTs to 3 clades of COG0457
COG name: TPR-repeat-containing proteins
Functional Class: R
The phylogenetic pattern of COG0457 is AMTKYQVCEB-HUJ--OLINX
Number of proteins in this genome belonging to this COG is 21
Blocks Summary: Blocks Search
No significant hit to the Blocks database.
ProDom Summary: Protein Domain Search
No significant hit to the ProDom database.
Paralogs: Local Blast Search
No paralogs found in P. gingivalis.
Pfam Summary: Pfam Search
No significant hits to the Pfam 11.0 database
Structural Feature(s):
| Feature Type | Start | Stop |
| coil-coil | ||
| non-globular | ||
| non-globular | ||
| transmembrane | ||
| non-globular |
Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).
Gene Protein Sequence:
MLKEVILVTQLNKYIMKLFRKLFGKELAKPNTSVEQQGKNPISVIGNVTE
SYIGCTININEIEPQWQDRLNAYIATLQQFKPKTALSLLEKLEASFATSA
KKPSPEFHSLISFQKGMCYRFLDERKKMCECFITAYNENTSVLEFEEQAA
LSYFKIEDTQRANELVDKLLCRNEYNPIAWYIKFLSTTTYDFNSIPAFVR
QNIMFQYMLYNYFNVKNIYKCISQMKAFSMLPNVKDYSPQDITIANFDEN
IFYSNVFFSEYLQNYYFAFHSLKEGNVEILKTLEVLLKKIVSAINGSELE
KKYGTLFFLNAYIQYILTKELRYISDMRDHYLKLENKNDTLALVCANVLQ
LNEQIDYALEILDDSDLKESNIFFLRAFCYLKKNDKIQYRTAIQAWINSI
EKIDNYVVDNYLASIFTLKDIGETDELKLSDFIQNEKFENQELKTLIETI
VKSLISGILDSPQISTLSELASTIQQPNLLLHIAYTYYHFKMYEPAIELY
EKHVDREKENLHLFSYMNSLYAAKKGSDELLGLLENWRLNFSFQPDLLKI
EADLCVILHNWNRCLQICNLFLDKHKQDEAFLCLKLRCLDVINEDWCDSE
IKLMAKSFEDYAFSIDQNIPIVASILVNRGCFVEGMEILYKYSDKRNVRS
AYLPATLIYSQRSQNKELLKEFDEITDGCFVKYESNGEINFFEMNKNGSD
NLYDELLGHKLGDVISIKRMSSKDYSIRILRIMDKYLYLHDKILEEAKQP
LSGLPMESFNFTSTDPEAMKKELIFLFGQKGEEEKLIREKLINNYYNREL
SFTEVIIQAFRHDYLGGYTSLIYEHSGISILPLSFYESPPQLVTTNYIID
FSSLAILYQIAKEHSITYTNKFLISVFTIDVIKQKLRIIKSEPKSELSVV
VTNEDVIKYQIPENVHQNNIIYLEGLLKWIENNCEAVVSPRVIDFKRNID
IEDKKEDFIDYILNTLLVFEDKQCVLLTDDFVYFKFNLAQIQFSMSTERY
IKNILGDEHPALFEFIKNKYRGYTLTTKQLFGEFNKKMNSQDNYYTNCLE
NISMVSAMPCVRLVDMIVQTQLDTNQKEIEIKNIFINIFKNGPLSNEIIQ
GFQQLLFSELNCSHENLNFVRQCLENVYQTLGISMINTKK
Gene Nucleotide Sequence: Sequence Viewer
ATGTTAAAGGAAGTCATATTGGTCACACAACTAAATAAATATATCATGAA
ATTATTTAGAAAGTTGTTTGGCAAGGAACTGGCAAAACCAAATACCTCTG
TTGAACAACAAGGAAAAAATCCGATATCTGTCATAGGCAATGTAACAGAG
AGTTATATTGGATGCACAATCAATATTAATGAAATTGAACCACAATGGCA
AGATCGGCTCAATGCATATATAGCTACTTTGCAACAATTTAAACCCAAAA
CGGCGTTGTCATTGCTTGAAAAATTGGAGGCAAGTTTCGCAACAAGTGCA
AAAAAACCTTCTCCAGAGTTTCACTCCTTAATATCATTTCAAAAAGGGAT
GTGCTATCGTTTTTTGGACGAACGAAAGAAGATGTGTGAATGTTTTATAA
CTGCATACAATGAAAATACTTCAGTGCTTGAGTTTGAGGAGCAGGCTGCT
CTTTCGTATTTTAAAATAGAAGATACACAAAGAGCAAATGAACTGGTTGA
TAAGTTATTGTGTAGAAATGAATATAATCCAATTGCATGGTATATCAAAT
TTTTGAGTACTACGACTTATGATTTTAATTCTATTCCGGCATTTGTTCGG
CAGAATATCATGTTTCAATATATGCTTTACAATTACTTCAATGTGAAAAA
TATTTACAAATGTATTTCACAGATGAAGGCTTTTTCAATGCTTCCCAATG
TCAAAGATTATAGTCCTCAAGATATAACCATAGCCAATTTTGACGAAAAT
ATATTTTACTCAAACGTATTCTTTTCTGAATATTTACAAAACTATTACTT
TGCTTTCCATTCTTTGAAAGAGGGGAATGTTGAGATTCTAAAAACACTGG
AGGTACTTCTAAAAAAAATAGTATCTGCAATCAATGGTTCTGAATTGGAA
AAGAAATATGGAACATTGTTTTTTCTTAATGCTTATATCCAATATATACT
TACAAAAGAGCTGAGATATATTTCTGACATGAGAGATCATTATCTCAAAT
TAGAGAACAAAAACGACACTCTTGCTTTGGTTTGTGCCAATGTGTTACAA
CTCAATGAACAAATAGATTATGCTCTTGAAATCTTAGATGATTCTGATTT
AAAAGAGTCGAATATTTTCTTCCTGAGGGCTTTCTGTTATCTAAAGAAAA
ATGATAAAATCCAATATAGGACAGCAATACAAGCCTGGATAAATTCCATT
GAGAAAATTGATAACTATGTAGTTGATAACTATCTTGCTTCAATTTTTAC
ATTAAAGGATATAGGCGAAACAGATGAATTAAAACTATCTGATTTTATTC
AAAACGAGAAGTTTGAAAATCAGGAATTGAAAACTTTAATAGAAACGATT
GTTAAATCCCTAATTAGCGGAATATTGGACTCTCCGCAGATATCGACTTT
GAGCGAGTTAGCTTCTACTATTCAACAGCCGAATTTATTATTACACATTG
CTTATACCTACTATCATTTTAAAATGTATGAACCTGCTATAGAGTTATAT
GAAAAGCACGTTGACAGAGAAAAAGAGAATCTTCATTTATTTTCCTATAT
GAATTCTTTATATGCAGCAAAAAAAGGCTCGGATGAACTACTTGGACTAT
TAGAAAATTGGAGATTGAATTTTTCATTTCAACCTGATTTACTAAAAATT
GAAGCTGATTTGTGTGTTATTTTACACAATTGGAATAGATGTTTGCAAAT
TTGTAATCTATTCTTAGATAAACACAAACAAGATGAGGCTTTTTTATGTC
TGAAATTAAGGTGTTTAGATGTTATAAACGAAGATTGGTGTGATAGTGAA
ATTAAATTAATGGCAAAAAGTTTTGAAGACTATGCTTTTTCTATTGATCA
AAACATACCAATAGTGGCAAGTATATTAGTTAATAGAGGTTGTTTTGTTG
AAGGAATGGAAATTCTTTATAAATATTCTGATAAAAGAAATGTCCGTTCT
GCATATCTGCCTGCAACACTTATATATTCTCAAAGATCACAAAATAAAGA
GCTTCTGAAAGAATTTGATGAAATTACAGATGGCTGTTTCGTAAAATATG
AGTCTAATGGTGAAATCAATTTCTTTGAAATGAATAAAAATGGCTCTGAC
AACTTATATGATGAGTTATTAGGACACAAATTAGGTGATGTAATATCCAT
TAAAAGAATGTCAAGCAAAGATTATTCAATTCGCATATTACGAATAATGG
ATAAGTATCTTTATTTACATGATAAAATCTTAGAAGAAGCCAAGCAGCCT
CTTTCGGGATTGCCAATGGAATCTTTCAACTTTACTAGCACTGACCCAGA
AGCAATGAAGAAAGAATTAATTTTTCTTTTCGGACAAAAAGGTGAGGAAG
AAAAGCTGATTAGAGAAAAATTAATAAATAACTATTACAACAGAGAATTA
TCTTTTACTGAAGTAATAATACAGGCATTTAGGCATGATTATTTAGGAGG
TTATACAAGTTTGATTTATGAGCACAGTGGTATCTCAATCCTTCCTCTTT
CATTTTATGAATCACCACCTCAACTTGTTACAACGAATTATATTATTGAC
TTTTCTTCATTGGCTATTCTTTATCAGATAGCAAAAGAACACAGCATTAC
ATATACTAACAAATTTCTAATTTCAGTTTTTACTATAGATGTGATAAAAC
AGAAATTGAGAATTATTAAATCAGAACCAAAATCTGAATTATCAGTTGTC
GTAACAAACGAAGACGTAATAAAATATCAGATTCCAGAAAATGTACATCA
AAATAATATTATATATTTAGAGGGTCTTTTAAAATGGATAGAAAATAACT
GTGAAGCAGTTGTTTCTCCTAGAGTAATTGATTTTAAAAGGAATATAGAT
ATAGAAGATAAAAAAGAGGATTTTATTGACTATATTTTGAATACTTTATT
AGTTTTCGAAGATAAGCAATGCGTATTGCTGACAGACGACTTTGTTTATT
TCAAATTCAATTTAGCTCAGATTCAGTTCTCAATGAGCACAGAGCGATAT
ATAAAAAACATTTTAGGAGACGAGCACCCAGCCTTGTTTGAATTTATCAA
AAATAAGTATAGGGGATATACATTGACTACAAAACAATTATTTGGAGAGT
TTAATAAAAAAATGAATTCCCAAGATAATTATTATACTAATTGCTTAGAA
AATATCAGTATGGTTTCTGCTATGCCATGTGTAAGATTAGTGGATATGAT
TGTACAAACACAACTTGATACTAATCAAAAAGAGATTGAGATAAAAAATA
TATTCATTAATATATTCAAAAATGGCCCTTTAAGTAATGAGATTATTCAA
GGTTTTCAACAGCTGCTCTTCTCAGAGTTAAACTGCTCGCATGAGAACCT
CAATTTTGTTCGTCAATGTTTAGAGAATGTGTATCAAACACTGGGAATAA
GTATGATAAATACAAAGAAA