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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0922 IGR0923 IGR0926 IGR0917 IGR0920 IGR0919 IGR0924 IGR0921 IGR0918 IGR0925 PG1082.1 PG1080 PG1079 PG1077 PG1078 PG1082 PG1076 PG1073 pdxB, - PG1081 PG1075 PG1083 yfmR, - PG1084 PG1082.1 PG1080 PG1079 PG1077 PG1078 PG1082 PG1076 PG1073 pdxB, - PG1081 PG1075 PG1083 yfmR, - PG1084 PG1082.1 PG1080 PG1079 PG1078 PG1082 PG1076 PG1073 pdxB, - PG1081 PG1075 PG1083 yfmR, - PG1084 PG1074 PG1074 PG1077


LANL Gene ID: PG1080

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Cytoplasm [Evidence]

Gene Start:
1297071

Gene Stop:
1296715

Gene Length:
357

Molecular Weight*:
13587

pI*:
6.50

Net Charge*:
-1.67

EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No hit found in gapped BLAST.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan

No hits reported.

COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
No paralogs found in P. gingivalis.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
















Feature Type  Start  Stop
No predicted structural features.  
  
transmembrane  
80  
96

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

LLGVDLAVFHFVAMDIVRESGQKSFGIVRSQDDAILDSCGVTIRNHTDEV
QDKFARRVHHDTEIAVVALSYFFGQFDVDCFAFVFHLFLNVLISSMRESA
KLNNVWHRYPLLNKVTPFV

Gene Nucleotide Sequence:  Sequence Viewer

TTGCTCGGTGTGGATCTCGCCGTGTTCCACTTCGTAGCGATGGATATTGT
CCGAGAGAGTGGTCAAAAGTCTTTTGGCATTGTCCGGAGTCAGGATGATG
CGATTTTGGACTCGTGCGGTGTCACGATTCGGAACCATACGGATGAAGTC
CAAGACAAATTCGCTCGGAGAGTGCATCACGATACAGAGATTGCAGTAGT
TGCCCTGAGCTATTTCTTCGGGCAGTTCGATGTTGATTGTTTTGCTTTCG
TTTTCCATTTGTTCTTGAATGTTTTAATAAGTAGTATGAGGGAAAGTGCC
AAGCTGAATAACGTATGGCACCGTTACCCCCTTTTGAACAAAGTTACTCC
TTTCGTC








    

      
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