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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR0927 IGR0926 IGR0928 IGR0930 IGR0931 IGR0929 IGR0925 PG1086 PG1088 PG1082.1 ISPg1, - PG1087 gdh, - PG1090 PG1089 PG1086.1 PG1085 PG1083 yfmR, - PG1084 PG1086 PG1088 PG1082.1 ISPg1, - PG1087 gdh, - PG1090 PG1089 PG1086.1 PG1085 PG1083 yfmR, - PG1084 Type: IS element, Name: ISPg1 - 2 PG1086 PG1088 PG1082.1 ISPg1, - PG1087 gdh, - PG1090 PG1089 PG1085 PG1083 yfmR, - PG1084 PG1086.1


LANL Gene ID: PG1086.1

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Periplasm, Extracellular [Evidence]

Gene Start:
1304156

Gene Stop:
1304401

Gene Length:
246

Molecular Weight*:
8945

pI*:


Net Charge*:


EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No hit found in gapped BLAST.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan

No hits reported.

COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
Residues 53-82 are 86% similar to residues 88-117 of PG0837, a hypothetical protein. Similarities are also seen to PG1663, an ISPg3 (IS195) transposase, and PG1061.2, a hypothetical protein.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
















Feature Type  Start  Stop
No predicted structural features.  
  

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

VPAPPSFTSTFFTRINRENSHAIGRKKTGERPVANLSDRSKSHATDLFGR
ENTIVRPLQNKEVEGRGVLGKKGASERGGSKE

Gene Nucleotide Sequence:  Sequence Viewer

GTGCCGGCTCCCCCTTCTTTTACCTCTACGTTTTTCACACGTATCAATCG
GGAGAACAGCCATGCCATCGGGAGGAAAAAAACGGGAGAAAGGCCGGTTG
CTAACCTTTCCGACCGTTCCAAGAGCCACGCGACAGATCTTTTTGGTCGG
GAAAATACCATTGTGAGACCTTTGCAAAATAAGGAGGTGGAGGGAAGAGG
AGTTCTTGGCAAAAAAGGAGCGAGTGAAAGGGGTGGCAGTAAGGAG








    

      
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