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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap tRNA-Gln-2 IGR0942 IGR0939 IGR0937 IGR0940 IGR0941 IGR0938 IGR0943 PG1098.1 PG1096 fabG, - PG1095 PG1100 ISPg1, - PG1099 dnaB, - PG1098 lepA, - PG1097 alaS, - PG1101 PG1098.1 PG1096 fabG, - PG1095 PG1100 ISPg1, - PG1099 dnaB, - PG1098 lepA, - PG1097 alaS, - PG1101 Type: IS element, Name: ISPg1 - 2 PG1098.1 fabG, - PG1095 PG1096 PG1100 ISPg1, - PG1099 dnaB, - PG1098 lepA, - PG1097 alaS, - PG1101


LANL Gene ID: PG1098.1

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Cytoplasm [Evidence]

Gene Start:
1319543

Gene Stop:
1319262

Gene Length:
282

Molecular Weight*:
11211

pI*:


Net Charge*:


EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No hit found in gapped BLAST.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan
























noIPR
unintegrated		






unintegrated





tmhmm
[60-80]? NA tmhmm transmembrane_regions
transmembrane_regions












COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
No paralogs found in P. gingivalis.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
Feature Type  Start  Stop
No predicted structural features.  
  

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

LKTIYIQNENDLYIYRKLFVYRSLSSLPKIIFRLEKVRILNFSTSMSTSF
HLLIWNHSKLLFVVENFFGTCLASVRSVYIPWFRLCSEPYLVVP

Gene Nucleotide Sequence:  Sequence Viewer

TTGAAAACGATTTATATACAAAACGAAAACGATCTATATATTTATCGTAA
ACTGTTTGTATATAGATCGTTATCTTCTCTTCCAAAAATCATATTTCGAC
TTGAAAAAGTCCGTATCCTCAACTTTTCGACTTCAATGTCCACTTCCTTT
CACTTGCTTATTTGGAATCATTCCAAACTCCTCTTCGTTGTTGAAAACTT
TTTTGGCACGTGTTTAGCCTCAGTTCGATCTGTCTATATACCGTGGTTTC
GTCTTTGCTCCGAACCCTATCTAGTTGTCCCA








    

      
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