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Record: 1 of 1 MiniMap

LANL Gene ID: PG1259GenBank Locus Tag: PG1436DNA Molecule Name: 1 Genomic Island ID: 12 GenBank ID: 34541111 Gene Name: Definition: conserved hypothetical protein Cellular Location: Cytoplasm [Evidence] Gene Start: 1521799 Gene Stop: 1523814 Gene Length: 2016 Molecular Weight*: 77485 pI*: 5.10 Net Charge*: -21.00 EC: Functional Class: Unknown; Conserved hypothetical Gene Ontology: Molecular function GO:0005524 ATP binding Pathway: pathway table Comment: TIGR ID: PG1436 Human Oral Microbiome Database: View in HOMD Genome Viewer Blast Summary: PSI-Blast Search One significant hit in gapped BLAST; e.g. residues 20-671 are 24% similar to gb|AAB91573.2| ylh of Agrobacterium tumefaciens. Top Blast Hits: Updated monthly Click here to view the entire PsiBlast results. gi|34541111|ref|NP_905590.1| ATPase, putative [Porphyromona... 1273 0.0 gi|85708232|ref|ZP_01039298.1| ATPase, putative [Erythrobac... 418 e-115 gi|114564811|ref|YP_752325.1| ATPase, putative [Shewanella ... 390 e-106 gi|150389398|ref|YP_001319447.1| hypothetical protein Amet_... 266 4e-69 gi|147678832|ref|YP_001213047.1| hypothetical protein PTH_2... 260 3e-67 gi|108801805|ref|YP_642002.1| hypothetical protein Mmcs_484... 249 3e-64 gi|33867261|ref|NP_898819.1| hypothetical protein PBD2.204 ... 248 9e-64 gi|153838498|ref|ZP_01991165.1| conserved hypothetical prot... 248 1e-63 gi|74316953|ref|YP_314693.1| hypothetical protein Tbd_0935 ... 209 4e-52 gi|71907928|ref|YP_285515.1| hypothetical protein Daro_2309... 205 1e-50 InterPro Summary: InterProScan

InterPro
IPR003594
Domain

ATP-binding region, ATPase-like
SSF55874		ATP_bd_ATPase

COGS Summary: COGS Search No hit to the COGs database. Blocks Summary: Blocks Search No significant hit to the Blocks database. ProDom Summary: Protein Domain Search Residues 439-671 are 29% similar to a (PLASMID PTIA6NC HYPOTHETICAL PROTEIN) protein domain (PD123287 which is seen in O52288_AGRTU. Paralogs: Local Blast Search No paralogs found in P. gingivalis. Pfam Summary: Pfam Search No significant hits to the Pfam 11.0 database Structural Feature(s): Feature Type Start Stop coil-coil 405 444 Top PDB Hits: -46% similar to PDB:1BO1 PHOSPHATIDYLINOSITOL PHOSPHATE KINASE TYPE II BETA (E_value = ); -50% similar to PDB:1WMX Crystal Structure of Family 30 Carbohydrate Binding Module (E_value = ); -50% similar to PDB:1WZX Crystal Structure of Family 30 Carbohydrate Binding Module. (E_value = ); -50% similar to PDB:2C24 FAMILY 30 CARBOHYDRATE-BINDING MODULE OF CELLULOSOMAL CELLULASE CEL9D-CEL44B OF CLOSTRIDIUM THERMOCELLUM (E_value = ); Gene Protein Sequence: MSKINIDRIVKDIKSKTTSLTPVIEAVCNSIDAIGSERTDGIIDIIVKRS GQQSLELDTTHTLSDIISIDVIDNGIGFTEENKNSFDTYRSGFKMSKGGK GFGRFMYLKYFYHVSIESIFYEEGKYKQRSFTFGHADEIIENEQIVDIES DSDLHTGTVLHLSSIKSFDLDKGLEVIARKLVERLLVFFVPGGEYTPKIT IKEENGSNSIVLNNYIGDNSDIQQIGKEEEFTIKGREDEWDFVVKIYKIY YSAITNKICLTANFREVTESALHNYVPEFKETMFEITEHGTQKNYMIKAY VQGKYLDENVTTERDGFNFGKEDDIYSDLSEKQIMKTTSLIIKTYFSEDI EKRYNDKKQKVEHYVYTTAPWNKTLLKDVDMESIPIGVSEFDLEMRFQKI KFDKEQNARIALKELQDKYSSGDESCDSALEDEANKILKNVTETAKNDLA HYVCQRRRIIELFDDLRKRIDGGKSHKESEMHNLIFPMIKDDREIGYEDH NLWLLDERFNFTQYIASDKVISSSDHKEPDLAIFYESGLFYRNGDNAITS PIAIVEFKRPKRTSYPDEENPINQALRYAGKILAGKYEMPKGVEEVIVDK SVTPVYIYIVCDIVPKIEEFADLAGLAISPDKQGYFGYNPKYNAYIEIKS FKKVIDDAKMRNQIFFKKLGLL Gene Nucleotide Sequence: Sequence Viewer ATGAGCAAGATTAATATTGATAGAATTGTCAAGGATATTAAGTCTAAAAC GACAAGTTTAACACCTGTCATTGAAGCTGTTTGTAATTCAATTGATGCAA TTGGTTCAGAAAGAACCGATGGCATTATTGACATTATTGTGAAGAGAAGC GGGCAGCAATCTTTAGAATTAGACACCACTCATACTTTATCAGACATTAT TTCTATCGATGTCATTGATAATGGAATTGGTTTTACTGAGGAAAATAAGA ATTCTTTTGATACATACAGAAGTGGCTTCAAAATGTCAAAAGGAGGTAAA GGCTTCGGTCGATTTATGTACCTAAAATACTTTTATCATGTCTCAATTGA AAGTATCTTCTATGAAGAGGGCAAATATAAACAACGTAGTTTTACATTTG GTCACGCAGATGAGATAATAGAAAATGAGCAAATTGTAGATATTGAATCC GACTCTGACCTGCATACAGGTACAGTTTTACATCTTTCTTCCATTAAGTC TTTTGATTTAGATAAAGGGCTTGAAGTTATTGCCAGAAAACTCGTGGAGC GTTTACTTGTATTCTTTGTCCCTGGAGGGGAATATACTCCAAAGATTACG ATTAAAGAAGAGAATGGCTCCAATTCAATAGTATTGAATAACTATATTGG AGACAATTCTGATATTCAACAAATTGGTAAAGAAGAAGAGTTTACAATAA AAGGCCGTGAGGATGAATGGGATTTTGTAGTCAAGATTTATAAAATATAC TATTCTGCAATAACAAATAAAATTTGTCTGACTGCAAATTTTAGGGAAGT TACAGAGTCAGCGTTGCATAATTATGTGCCTGAATTTAAAGAAACGATGT TCGAGATAACAGAACATGGAACTCAGAAGAACTACATGATAAAAGCGTAT GTTCAAGGTAAATATCTAGATGAAAATGTAACAACAGAAAGAGATGGTTT CAATTTTGGAAAAGAAGATGACATTTATTCTGATTTATCTGAGAAACAAA TAATGAAAACAACTTCATTAATCATTAAAACGTATTTTTCCGAAGACATA GAAAAACGATATAATGATAAGAAGCAAAAAGTCGAACATTATGTATATAC TACAGCACCTTGGAATAAGACTTTGTTAAAAGACGTAGATATGGAATCTA TTCCAATAGGAGTTTCAGAATTTGATTTGGAAATGCGCTTCCAAAAAATA AAGTTTGACAAAGAGCAAAATGCAAGGATAGCATTAAAGGAATTGCAAGA TAAATACTCATCGGGAGACGAAAGTTGCGATAGCGCACTAGAAGATGAAG CAAATAAAATCTTGAAAAATGTAACAGAAACAGCTAAGAATGATTTGGCT CATTATGTTTGCCAGAGACGTAGAATAATAGAATTGTTTGATGATTTGCG TAAAAGAATAGATGGTGGAAAATCACATAAAGAAAGTGAAATGCATAACC TAATATTTCCTATGATTAAGGATGATAGGGAAATCGGATATGAGGATCAT AATCTATGGTTACTTGATGAAAGATTTAATTTTACCCAATATATAGCATC AGATAAAGTCATTTCTAGTTCTGATCATAAAGAGCCAGACCTTGCTATAT TCTATGAAAGTGGGCTGTTTTATAGAAATGGAGATAATGCTATCACTTCT CCTATTGCTATTGTTGAATTTAAGCGACCTAAACGCACAAGTTATCCGGA TGAAGAAAATCCAATAAATCAAGCATTGCGATATGCGGGTAAAATTCTTG CTGGTAAATATGAGATGCCTAAGGGTGTAGAAGAGGTTATTGTAGATAAA AGCGTAACTCCCGTTTACATATACATTGTATGCGATATCGTTCCTAAAAT TGAAGAGTTTGCTGATTTAGCAGGACTTGCTATAAGCCCAGACAAACAAG GATACTTTGGTTATAATCCTAAGTATAATGCATATATTGAAATAAAGAGT TTCAAGAAAGTTATTGATGATGCTAAAATGCGTAATCAAATATTTTTTAA AAAATTAGGTCTGTTA Los Alamos National Laboratory • Est 1943 Operated by Los Alamos National Security, LLC for the U.S. Department of Energy's National Nuclear Security Administration Inside | © Copyright 2006 LANS LLC All rights reserved | Disclaimer/Privacy

`Feature Type`	`Start`	`Stop`
`coil-coil`	`405`	`444`