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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR1134 IGR1130 IGR1131 IGR1128 IGR1132 IGR1135 IGR1137 IGR1133 IGR1136 IGR1129 PG1316 recG, - PG1323 PG1319.1 PG1321 PG1316.1 PG1322 hemN, - PG1319 PG1317 PG1318 PG1320 PG1316 recG, - PG1323 PG1319.1 PG1321 PG1316.1 PG1322 hemN, - PG1319 PG1317 PG1318 PG1320 PG1316 recG, - PG1323 PG1319.1 PG1321 PG1316.1 PG1322 hemN, - PG1319 PG1317 PG1318 PG1320


LANL Gene ID: PG1319.1

GenBank Locus Tag:

DNA Molecule Name:
1  

Genomic Island ID:
14

GenBank ID:


 Gene Name:


 Definition:
hypothetical protein

 Cellular Location:
Inner membrane, Cytoplasm [Evidence]

 Gene Start:
1583365

Gene Stop:
1583763

Gene Length:
399

Molecular Weight*:
15533

pI*:


Net Charge*:


EC:
 

 Functional Class:
Unknown; Hypothetical  

 Gene Ontology:

Pathway: pathway table

 Comment:
NO TIGR ID corresponds to this gene.

 Human Oral Microbiome Database:
View in HOMD Genome Viewer

 Blast Summary:  PSI-Blast Search
No hit found in gapped BLAST.

 Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan













noIPR
unintegrated		






unintegrated





signalp
[1-20]? NA signalp signal-peptide
signal-peptide




tmhmm
[5-24]? NA tmhmm transmembrane_regions[30-52]? NA tmhmm transmembrane_regions[61-79]? NA tmhmm transmembrane_regions[98-118]? NA tmhmm transmembrane_regions
transmembrane_regions












COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
No paralogs found in P. gingivalis.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
Feature Type  Start  Stop
No predicted structural features.  
  
uncleavable signal  
1  
20
transmembrane  
4  
20
transmembrane  
62  
78
transmembrane  
99  
115

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

MKKILITANLVCVFMHILFGLSILENRSDIYLFMSVENSITTFTYLLVSY
LICCSEKQKKALFINLIFWSFFEINVLFFKPNVTTLYVIEKHLPQLQQWI
VLSIYGGILIFLTTLEIAKTYNLGILTPKRVKR

Gene Nucleotide Sequence:  Sequence Viewer

ATGAAGAAGATCTTGATTACTGCCAATTTAGTGTGTGTATTCATGCACAT
TTTATTTGGACTGTCTATTTTAGAAAACAGGTCTGACATATATCTTTTTA
TGTCAGTTGAAAATTCAATTACCACATTTACATATCTCCTTGTTTCTTAT
CTGATTTGCTGTTCTGAAAAGCAAAAAAAAGCATTGTTTATCAATTTGAT
ATTCTGGAGTTTTTTTGAGATAAATGTGTTATTCTTCAAACCGAATGTAA
CGACTTTATATGTTATAGAGAAACATTTACCTCAACTGCAACAGTGGATT
GTTCTGTCTATATATGGAGGAATACTAATATTTCTCACAACATTAGAAAT
TGCAAAAACTTATAACCTCGGAATACTAACCCCTAAAAGAGTAAAAAGA








    

      
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