Basic Search | Intermediate Search | Advanced Search | Gene Image Map |  Sequence Search |  Protein Motif Search |  Repeat Search |  DNA/RNA Motif Search |  Home

Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR1184 IGR1182 IGR1181 IGR1178 IGR1177 IGR1183 IGR1180 IGR1176 IGR1179 IGR1175 PG1374 crp, - PG1375 PG1373 PG1372 PG1357.1 nadC, - PG1377 PG1380 nadA, - PG1378 moxR, - PG1379 nadB, - PG1376 PG1374 crp, - PG1375 PG1373 PG1372 PG1357.1 nadC, - PG1377 PG1380 nadA, - PG1378 moxR, - PG1379 nadB, - PG1376 PG1374 crp, - PG1375 PG1373 PG1372 PG1357.1 nadC, - PG1377 nadA, - PG1378 moxR, - PG1379 nadB, - PG1376 PG1380


LANL Gene ID: PG1357.1

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Cytoplasm [Evidence]

Gene Start:
1652678

Gene Stop:
1652941

Gene Length:
264

Molecular Weight*:
10728

pI*:


Net Charge*:


EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No hit found in gapped BLAST.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan
























noIPR
unintegrated		






unintegrated





tmhmm
[50-70]? NA tmhmm transmembrane_regions
transmembrane_regions












COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
Residues 1-88 have 81% similarity to PG0340.1.
Residues 8-88 have 49% similarity to hypothetical protein PG1821.1.
 

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
Feature Type  Start  Stop
No predicted structural features.  
  

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

LSLRFIYKITYDLYIYQKRFKYKMKTICIQIENALYTNRCTACFKWNFDL
WQFLFPPLLPCFSPLYRYLFGIVPNSSSLLKTFLAHDF

Gene Nucleotide Sequence:  Sequence Viewer

TTGAGCCTGCGATTTATATACAAAATCACTTACGATCTATATATTTATCA
AAAACGATTTAAATATAAAATGAAAACGATTTGTATACAAATTGAAAACG
CTTTATATACAAATCGTTGTACGGCTTGTTTTAAGTGGAATTTCGATCTA
TGGCAGTTCCTTTTCCCTCCACTTTTACCTTGCTTTTCTCCTCTCTACAG
ATACTTATTTGGAATCGTTCCAAACTCGTCTTCGTTGTTGAAAACTTTTT
TGGCGCATGATTTT








    

      
 Los Alamos National Laboratory • Est 1943 
    

    


Operated by Los Alamos National
    Security, LLC for the U.S. Department
    of Energy's National Nuclear Security Administration


Inside | © Copyright
2006 LANS LLC All rights reserved | Disclaimer/Privacy