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Porphyromonas gingivalis Search Results

Record: 1 of 1  
MiniMap IGR1403 IGR1400 IGR1399 IGR1404 IGR1396 IGR1397 IGR1398 IGR1405 IGR1402 IGR1401 PG1644.1 PG1650 PG1645 PG1649 PG1647 PG1643 PG1644 PG1651 PG1648 PG1642 PG1646 metK, - PG1652 PG1644.1 PG1650 PG1645 PG1649 PG1647 PG1643 PG1644 PG1651 PG1648 PG1642 PG1646 metK, - PG1652 PG1644.1 PG1645 PG1649 PG1644 PG1651 PG1648 PG1642 PG1646 metK, - PG1652 PG1646.1 PG1647 PG1650 PG1643 PG1646.1


LANL Gene ID: PG1647

GenBank Locus Tag:

DNA Molecule Name:
1  

GenBank ID:


Gene Name:


Definition:
hypothetical protein

Cellular Location:
Outer membrane, Inner membrane, Cytoplasm [Evidence]

Gene Start:
1989959

Gene Stop:
1990546

Gene Length:
588

Molecular Weight*:
22861

pI*:
8.80

Net Charge*:
4.05

EC:
 

Functional Class:
Unknown; Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:
NO TIGR ID corresponds to this gene.

Human Oral Microbiome Database:
View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No hit found in gapped BLAST.

Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.


***** No hits found ******




InterPro Summary:  InterProScan
























noIPR
unintegrated		






unintegrated





signalp
[1-25]? NA signalp signal-peptide
signal-peptide




tmhmm
[9-29]? NA tmhmm transmembrane_regions
transmembrane_regions












COGS Summary:  COGS Search
No hit to the COGs database.


Blocks Summary:  Blocks Search
No significant hit to the Blocks database.


ProDom Summary:  Protein Domain Search
No significant hit to the ProDom database.

Paralogs:  Local Blast Search
No paralogs found in P. gingivalis.

Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database


Structural Feature(s):
Feature Type  Start  Stop
gram negative signal  
1  
25
cleavable signal  
1  
25
non-globular  
26  
109

Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).

Gene Protein Sequence:

VHNFMAKKLSFWGATLLFFSVSALSQNILTDISKYDLNKIEKRTIKKSRK
LLKTEKERKLFAFTYFAIGLSDFSSKKNGDIDNFLKNFKLSSKGNSIADD
FFENFKLYDYRCYVYDDSLNIIAMAMKTNVFLFGSTTPDSRYIEYITRIN
PEYTFEYIFYPGSCCMYFCYKNGEIIIVRLSDDGENIISYPLSDSK

Gene Nucleotide Sequence:  Sequence Viewer

GTGCACAATTTCATGGCAAAGAAACTATCTTTTTGGGGGGCAACATTGTT
ATTTTTTAGCGTGTCTGCACTTTCACAAAACATATTGACGGACATAAGCA
AATACGACTTGAATAAAATAGAAAAACGGACGATTAAAAAAAGTCGTAAG
CTCTTAAAAACAGAAAAAGAGCGAAAGCTTTTTGCCTTCACGTATTTTGC
AATAGGATTATCGGATTTTTCTTCTAAAAAAAACGGCGATATCGACAATT
TTCTCAAGAATTTCAAATTATCAAGCAAAGGGAACAGTATTGCCGATGAT
TTTTTCGAAAACTTTAAACTCTATGATTACAGATGCTATGTATACGACGA
CTCGTTGAATATAATTGCGATGGCAATGAAAACAAATGTATTCCTTTTTG
GCAGCACAACGCCAGACAGTAGATATATTGAGTATATAACAAGAATAAAT
CCTGAATACACATTTGAATACATATTTTACCCGGGATCATGCTGCATGTA
TTTTTGTTACAAAAATGGTGAAATTATAATTGTTCGTTTGTCTGATGATG
GTGAAAATATTATTTCTTATCCTTTATCAGATTCAAAG








    

      
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