LANL Gene ID: PG1795
GenBank Locus Tag: PG2056
DNA Molecule Name:
1
GenBank ID:
Gene Name:
ISPg2
Definition:
ISPg2 fragment (PGIS2-related fragment)
Cellular Location:
Cytoplasm [Evidence]
Gene Start:
2154263
Gene Stop:
2153961
Gene Length:
303
Molecular Weight*:
11678
pI*:
10.60
Net Charge*:
8.85
EC:
Functional Class:
Transposon functions
Gene Ontology:
Pathway: pathway table
Comment:
Pfam does not pick up similarity to the transposase model.
Member of IS5 family of elements. Corresponds to the C-terminal domain of full-length ISPg2 elements such as PG1522.
TIGR ID: PG2056
Human Oral Microbiome Database:
View in HOMD Genome Viewer
Blast Summary: PSI-Blast Search
PG1795 is weakly similar to gb|AAC45368.1, a previously sequenced ISPg2 sequence: residues 2-98 are 43% similar to the C-terminal residues of gb|AAC45368.1.
Top Blast Hits: Updated monthly
Click here to view the entire PsiBlast results.
InterPro Summary: InterProScan
No hits reported.
COGS Summary: COGS Search
No hit to the COGs database.
Blocks Summary: Blocks Search
No significant hit to the Blocks database.
ProDom Summary: Protein Domain Search
No significant hit to the ProDom database.
Paralogs: Local Blast Search
PG1795 is weakly similar to PG1905, PG1522, PG1185, PG0775, PG0249, PG0943, all predicted ISPg2 transposases. Specifically it corresponds to the C-terminal domain of full-length ISPg2 elements such as PG1522.
Pfam Summary: Pfam Search
No significant hits to the Pfam 11.0 database
Structural Feature(s):
| Feature Type | Start | Stop |
| No predicted structural features. |
Top PDB Hits:
No significant hits to the PDB database (E-value < E-10).
Gene Protein Sequence:
LDRGSPFVKGYGKYLSNAEEVCKLIRYHWAIENNLYHCHDVILGEDRSLR
RKDNAAKNVNIIHKIALFFLERLKSRPKSSFNALQKINALRKPSQILSSD
L
Gene Nucleotide Sequence: Sequence Viewer
TTGGATCGGGGTTCGCCTTTTGTGAAAGGATATGGGAAATATCTGTCAAA
TGCCGAAGAAGTCTGTAAGCTCATACGATACCATTGGGCCATAGAGAACA
ATCTGTACCATTGTCATGATGTCATTCTCGGAGAAGATCGATCGCTCAGA
CGAAAGGACAATGCAGCCAAAAATGTCAATATAATCCATAAGATAGCTCT
CTTCTTTCTCGAACGATTGAAGAGCAGACCCAAAAGCTCATTCAATGCGC
TGCAAAAGATAAACGCCCTCAGAAAACCTTCCCAAATACTATCATCCGAT
CTC