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Secondary Structure Features for null

Structural features are tabluated below. If a gene has a predicted feature, it appears in the table with its definition, feature type, the start and stop of the feature relative to the first amino acid and the method used to predict the feature. When the PSORT method is used, a signal peptide with a good cleavage site is noted as cleavable and a signal peptide with a bad cleavage site is noted as uncleavable.



Gene ID   Definition                       Structural Feature Start  Stop  Method
--------- -------------------------------- ------------------ -----  ----- -----------
FN0004    inner membrane protein (spoIIIJ   Transmembrane     26    42    Psort
          family)
                                            Transmembrane     96    112   Psort

FN0007    glucose inhibited division        Transmembrane     158   174   Psort
          protein A

FN0009    L-aspartate oxidase; quinolinate  Uncleavable N-    1     21    Psort
          synthetase B                      term signal seq
                                            Transmembrane     8     24    Psort

FN0013    Fusobacterium-specific protein,   Uncleavable N-    1     53    Psort
          possible Na+ channel protein      term signal seq
                                            Transmembrane     4     20    Psort
                                            Transmembrane     35    51    Psort
                                            Transmembrane     55    71    Psort

FN0014    Fusobacterium-specific protein,   Transmembrane     26    42    Psort
          possible Na+ channel protein

FN0018    hypothetical protein              Uncleavable N-    1     14    Psort
                                            term signal seq

FN0023    short-chain fatty acids           Uncleavable N-    1     23    Psort
          transporter (S-transferase)       term signal seq
                                            Transmembrane     11    27    Psort
                                            Transmembrane     101   117   Psort
                                            Transmembrane     139   155   Psort
                                            Transmembrane     162   178   Psort
                                            Transmembrane     224   240   Psort
                                            Transmembrane     282   298   Psort
                                            Transmembrane     311   327   Psort
                                            Transmembrane     347   363   Psort
                                            Transmembrane     393   409   Psort
                                            Transmembrane     450   466   Psort
                                            Transmembrane     480   496   Psort

FN0025    predicted 24-amino acid repeat    Cleavable N-term  1     18    Psort
          protein (exported)                signal seq

FN0027    hypothetical protein              Uncleavable N-    1     41    Psort
                                            term signal seq
                                            Transmembrane     7     23    Psort

FN0033    conserved hypothetical protein    Transmembrane     264   280   Psort

FN0034    Fusobacterium-specific protein,   Cleavable N-term  1     15    Psort
          uncharacterized                   signal seq

FN0035    Fusobacterium-specific protein,   Uncleavable N-    1     15    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     2     18    Psort

FN0036    predicted membrane-spanning       Uncleavable N-    1     36    Psort
          protein                           term signal seq
                                            Transmembrane     7     23    Psort
                                            Transmembrane     60    76    Psort

FN0037    conserved hypothetical protein    Uncleavable N-    1     34    Psort
                                            term signal seq
                                            Transmembrane     19    35    Psort
                                            Transmembrane     50    66    Psort

FN0042    rod shape-determining protein     Transmembrane     44    60    Psort
                                            Transmembrane     75    91    Psort
                                            Transmembrane     112   128   Psort
                                            Transmembrane     153   169   Psort
                                            Transmembrane     185   201   Psort
                                            Transmembrane     206   222   Psort
                                            Transmembrane     233   249   Psort
                                            Transmembrane     326   342   Psort
                                            Transmembrane     369   385   Psort
                                            Transmembrane     394   410   Psort

FN0046    3-dehydroquinate dehydratase II   Transmembrane     126   142   Psort

FN0050    fumarate reductase, flavoprotein  Transmembrane     117   133   Psort
          subunit

FN0051    hypothetical protein              Uncleavable N-    1     19    Psort
                                            term signal seq
                                            Transmembrane     6     22    Psort

FN0053    branched-chain amino acid         Cleavable N-term  1     61    Psort
          transport system carrier protein  signal seq
                                            Transmembrane     81    97    Psort
                                            Transmembrane     117   133   Psort
                                            Transmembrane     150   166   Psort
                                            Transmembrane     191   207   Psort
                                            Transmembrane     222   238   Psort
                                            Transmembrane     262   278   Psort
                                            Transmembrane     279   295   Psort
                                            Transmembrane     312   328   Psort
                                            Transmembrane     336   352   Psort
                                            Transmembrane     366   382   Psort
                                            Transmembrane     404   420   Psort

FN0057    endonuclease III                  Uncleavable N-    1     30    Psort
                                            term signal seq

FN0063    Fusobacterium-specific protein,   Cleavable N-term  1     14    Psort
          uncharacterized                   signal seq

FN0066    histidine kinase                  Transmembrane     229   245   Psort
                                            Transmembrane     322   338   Psort

FN0068    lipoprotein signal peptidase      Uncleavable N-    1     41    Psort
                                            term signal seq
                                            Transmembrane     10    26    Psort
                                            Transmembrane     72    88    Psort
                                            Transmembrane     142   158   Psort

FN0073    dihydropteroate synthase          Uncleavable N-    1     33    Psort
                                            term signal seq

FN0075    ethanolamine utilization protein  Transmembrane     58    74    Psort
          P

FN0077    ethanolamine two-component        Transmembrane     108   124   Psort
          sensor kinase

FN0078    ethanolamine utilization protein  Uncleavable N-    1     22    Psort
          A (chaperonin)                    term signal seq
                                            Transmembrane     456   472   Psort

FN0082    ethanolamine utilization protein  Uncleavable N-    1     19    Psort
          M; carboxysome structural         term signal seq
          protein

FN0084    acetaldehyde dehydrogenase        Transmembrane     156   172   Psort
          (acetylating)

FN0085    ethanolamine utilization          Transmembrane     231   247   Psort
          cobalamin adenosyltransferase

FN0089    ethanolamine permease             Cleavable N-term  1     55    Psort
          (ethanolamine utilization         signal seq
          protein)
                                            Transmembrane     115   131   Psort
                                            Transmembrane     153   169   Psort
                                            Transmembrane     173   189   Psort
                                            Transmembrane     201   217   Psort
                                            Transmembrane     237   253   Psort
                                            Transmembrane     307   323   Psort
                                            Transmembrane     340   356   Psort

FN0094    hypothetical protein              Uncleavable N-    1     55    Psort
                                            term signal seq
                                            Transmembrane     14    30    Psort
                                            Transmembrane     33    49    Psort

FN0100    Na(+)-translocating NADH-quinone  Transmembrane     99    115   Psort
          reductase

FN0107    sodium/proline symporter          Cleavable N-term  1     52    Psort
                                            signal seq
                                            Transmembrane     66    82    Psort
                                            Transmembrane     128   144   Psort
                                            Transmembrane     161   177   Psort
                                            Transmembrane     189   205   Psort
                                            Transmembrane     272   288   Psort
                                            Transmembrane     322   338   Psort
                                            Transmembrane     370   386   Psort
                                            Transmembrane     400   416   Psort
                                            Transmembrane     423   439   Psort
                                            Transmembrane     448   464   Psort

FN0108    microcin C7 self-immunity         Transmembrane     203   219   Psort
          protein F

FN0109    hypothetical protein              Uncleavable N-    1     19    Psort
                                            term signal seq
                                            Transmembrane     2     18    Psort
                                            Transmembrane     20    36    Psort
                                            Transmembrane     48    64    Psort
                                            Transmembrane     85    101   Psort

FN0112    hypothetical protein              Uncleavable N-    1     23    Psort
                                            term signal seq
                                            Transmembrane     10    26    Psort

FN0113    heat-inducible transcription      Transmembrane     149   165   Psort
          repressor

FN0115    hypothetical protein              Uncleavable N-    1     55    Psort
                                            term signal seq
                                            Transmembrane     2     18    Psort
                                            Transmembrane     64    80    Psort
                                            Transmembrane     82    98    Psort

FN0120    hypothetical protein              Cleavable N-term  1     18    Psort
                                            signal seq

FN0122    hypothetical protein              Uncleavable N-    1     33    Psort
                                            term signal seq
                                            Transmembrane     16    32    Psort

FN0128    predicted spermidine/putrescine   Transmembrane     116   132   Psort
          ABC transporter, solute-binding
          protein

FN0130    ABC transporter, ATP-binding      Transmembrane     158   174   Psort
          protein

FN0131    hemolysin activator protein       Cleavable N-term  1     18    Psort
          precursor                         signal seq

FN0141    hypothetical protein              Uncleavable N-    1     19    Psort
                                            term signal seq

FN0144    hypothetical protein              Uncleavable N-    1     34    Psort
                                            term signal seq
                                            Transmembrane     42    58    Psort

FN0145    hypothetical protein              Cleavable N-term  1     28    Psort
                                            signal seq

FN0146    hypothetical protein              Uncleavable N-    1     60    Psort
                                            term signal seq
                                            Transmembrane     9     25    Psort
                                            Transmembrane     71    87    Psort
                                            Transmembrane     112   128   Psort

FN0151    3-oxoacyl-[acyl-carrier-protein]  Uncleavable N-    1     22    Psort
          synthase                          term signal seq
                                            Transmembrane     4     20    Psort

FN0155    Fusobacterium-specific protein,   Cleavable N-term  1     17    Psort
          uncharacterized                   signal seq

FN0157    DNA repair protein (radA/sms)     Transmembrane     364   380   Psort

FN0158    DNA-binding protein               Transmembrane     22    38    Psort

FN0162    Na+ driven multidrug efflux pump  Uncleavable N-    1     46    Psort
                                            term signal seq
                                            Transmembrane     13    29    Psort
                                            Transmembrane     88    104   Psort
                                            Transmembrane     135   151   Psort
                                            Transmembrane     173   189   Psort
                                            Transmembrane     194   210   Psort
                                            Transmembrane     256   272   Psort
                                            Transmembrane     275   291   Psort
                                            Transmembrane     318   334   Psort
                                            Transmembrane     358   374   Psort
                                            Transmembrane     391   407   Psort

FN0166    hypothetical protein              Uncleavable N-    1     22    Psort
                                            term signal seq
                                            Transmembrane     3     19    Psort
                                            Transmembrane     38    54    Psort
                                            Transmembrane     69    85    Psort
                                            Transmembrane     96    112   Psort

FN0167    hypothetical protein              Transmembrane     28    44    Psort
                                            Transmembrane     49    65    Psort

FN0174    enoyl-[acyl-carrier-protein]      Transmembrane     158   174   Psort
          reductase

FN0178    ankyrin repeat protein            Transmembrane     206   222   Psort

FN0181    conserved hypothetical protein    Uncleavable N-    1     20    Psort
                                            term signal seq

FN0182    sarcosine oxidase, alpha subunit  Transmembrane     7     23    Psort

FN0183    glycerol-3-phosphate              Cleavable N-term  1     39    Psort
          dehydrogenase                     signal seq

FN0184    Fusobacterium-specific protein,   Transmembrane     13    29    Psort
          uncharacterizedprotein
                                            Transmembrane     43    59    Psort
                                            Transmembrane     127   143   Psort

FN0186    cytochrome c-type biogenesis      Uncleavable N-    1     61    Psort
          protein                           term signal seq
                                            Transmembrane     16    32    Psort
                                            Transmembrane     47    63    Psort
                                            Transmembrane     78    94    Psort
                                            Transmembrane     128   144   Psort
                                            Transmembrane     156   172   Psort
                                            Transmembrane     199   215   Psort

FN0187    probable thiol:disulfide          Cleavable N-term  1     22    Psort
          interchange protein               signal seq

FN0190    two-component sensor kinase       Cleavable N-term  1     37    Psort
                                            signal seq
                                            Transmembrane     285   301   Psort

FN0192    dipeptide ABC transporter,        May be a                      Psort
          dipeptide-binding protein         lipotein (signal

FN0193    dipeptide ABC transporter,        Uncleavable N-    1     21    Psort
          permease protein                  term signal seq
                                            Transmembrane     6     22    Psort
                                            Transmembrane     98    114   Psort
                                            Transmembrane     139   155   Psort
                                            Transmembrane     285   301   Psort

FN0194    dipeptide ABC transporter,        Uncleavable N-    1     28    Psort
          permease protein                  term signal seq
                                            Transmembrane     13    29    Psort
                                            Transmembrane     71    87    Psort
                                            Transmembrane     106   122   Psort
                                            Transmembrane     133   149   Psort
                                            Transmembrane     185   201   Psort
                                            Transmembrane     243   259   Psort

FN0195    dipeptide ABC transporter, ATP-   Transmembrane     194   210   Psort
          binding protein

FN0196    predicted transcriptional         Uncleavable N-    1     21    Psort
          regulator, FUR family             term signal seq

FN0199    Fusobacterium-specific protein,   Cleavable N-term  1     20    Psort
          uncharacterized                   signal seq
                                            Transmembrane     22    38    Psort

FN0201    glutaconyl-CoA decarboxylase,     Transmembrane     23    39    Psort
          subunit B
                                            Transmembrane     45    61    Psort
                                            Transmembrane     107   123   Psort
                                            Transmembrane     161   177   Psort
                                            Transmembrane     207   223   Psort
                                            Transmembrane     252   268   Psort
                                            Transmembrane     283   299   Psort
                                            Transmembrane     354   370   Psort

FN0203    glutaconate CoA-transferase,      Transmembrane     26    42    Psort
          subunit B

FN0204    glutaconyl-CoA decarboxylase,     Transmembrane     345   361   Psort
          subunit A

FN0205    sodium/glutamate symport carrier  Cleavable N-term  1     51    Psort
          protein                           signal seq
                                            Transmembrane     77    93    Psort
                                            Transmembrane     97    113   Psort
                                            Transmembrane     165   181   Psort
                                            Transmembrane     224   240   Psort
                                            Transmembrane     257   273   Psort
                                            Transmembrane     290   306   Psort
                                            Transmembrane     315   331   Psort
                                            Transmembrane     382   398   Psort

FN0214    holliday junction resolvase;      Uncleavable N-    1     41    Psort
          crossover junction                term signal seq
          endodeoxyribonuclease (ruvC)

FN0215    Mg2+ transport protein            Uncleavable N-    1     58    Psort
                                            term signal seq
                                            Transmembrane     18    34    Psort
                                            Transmembrane     46    62    Psort
                                            Transmembrane     141   157   Psort

FN0220    autolysin sensor kinase           Transmembrane     27    43    Psort
                                            Transmembrane     57    73    Psort
                                            Transmembrane     93    109   Psort
                                            Transmembrane     126   142   Psort
                                            Transmembrane     156   172   Psort

FN0221    carbon starvation protein A       Uncleavable N-    1     36    Psort
                                            term signal seq
                                            Transmembrane     3     19    Psort
                                            Transmembrane     78    94    Psort
                                            Transmembrane     129   145   Psort
                                            Transmembrane     159   175   Psort
                                            Transmembrane     189   205   Psort
                                            Transmembrane     225   241   Psort
                                            Transmembrane     272   288   Psort
                                            Transmembrane     308   324   Psort
                                            Transmembrane     355   371   Psort
                                            Transmembrane     408   424   Psort
                                            Transmembrane     446   462   Psort

FN0222    melibiose carrier protein         Uncleavable N-    1     57    Psort
                                            term signal seq
                                            Transmembrane     44    60    Psort
                                            Transmembrane     85    101   Psort
                                            Transmembrane     115   131   Psort
                                            Transmembrane     162   178   Psort
                                            Transmembrane     191   207   Psort
                                            Transmembrane     236   252   Psort
                                            Transmembrane     271   287   Psort
                                            Transmembrane     303   319   Psort
                                            Transmembrane     329   345   Psort
                                            Transmembrane     380   396   Psort
                                            Transmembrane     417   433   Psort

FN0223    competence protein, DNA-binding   Transmembrane     142   158   Psort
                                            Transmembrane     167   183   Psort
                                            Transmembrane     215   231   Psort
                                            Transmembrane     266   282   Psort
                                            Transmembrane     292   308   Psort
                                            Transmembrane     327   343   Psort
                                            Transmembrane     358   374   Psort

FN0225    gluconate permease                Uncleavable N-    1     27    Psort
                                            term signal seq
                                            Transmembrane     5     21    Psort
                                            Transmembrane     28    44    Psort
                                            Transmembrane     64    80    Psort
                                            Transmembrane     108   124   Psort
                                            Transmembrane     138   154   Psort
                                            Transmembrane     177   193   Psort
                                            Transmembrane     237   253   Psort
                                            Transmembrane     272   288   Psort
                                            Transmembrane     312   328   Psort
                                            Transmembrane     346   362   Psort
                                            Transmembrane     389   405   Psort
                                            Transmembrane     435   451   Psort

FN0230    conserved hypothetical protein    Cleavable N-term  1     26    Psort
          (probable transmembrane protein)  signal seq

FN0233    Fusobacterium-specific protein,   Transmembrane     167   183   Psort
          uncharacterized
                                            Transmembrane     186   202   Psort
                                            Transmembrane     223   239   Psort
                                            Transmembrane     282   298   Psort

FN0236    ABC transporter, substrate-       May be a                      Psort
          binding protein (possible         lipotein (signal
          hydroxymethylpyrimidine binding
          protein)

FN0237    ABC transporter, permease         Cleavable N-term  1     47    Psort
          protein (possible ntrB)           signal seq
                                            Transmembrane     49    65    Psort
                                            Transmembrane     79    95    Psort
                                            Transmembrane     106   122   Psort
                                            Transmembrane     204   220   Psort

FN0239    Fusobacterium-specific protein,   Uncleavable N-    1     49    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     9     25    Psort
                                            Transmembrane     27    43    Psort

FN0245    copper-exporting ATPase           Transmembrane     113   129   Psort
                                            Transmembrane     144   160   Psort
                                            Transmembrane     368   384   Psort
                                            Transmembrane     404   420   Psort

FN0248    Fusobacterium-specific protein,   Cleavable N-term  1     18    Psort
          possible exported protein         signal seq

FN0250    Fusobacterium-specific protein,   Cleavable N-term  1     20    Psort
          uncharacterized                   signal seq

FN0251    Fusobacterium-specific protein,   Cleavable N-term  1     13    Psort
          possible membrane-spanning        signal seq
          protein

FN0252    Fusobacterium-specific protein,   May be a                      Psort
          uncharacterized                   lipotein (signal

FN0257    conserved hypothetical protein    Cleavable N-term  1     28    Psort
          (predicted transporter)           signal seq
                                            Transmembrane     117   133   Psort
                                            Transmembrane     157   173   Psort
                                            Transmembrane     197   213   Psort
                                            Transmembrane     238   254   Psort
                                            Transmembrane     299   315   Psort
                                            Transmembrane     326   342   Psort
                                            Transmembrane     358   374   Psort
                                            Transmembrane     399   415   Psort
                                            Transmembrane     428   444   Psort
                                            Transmembrane     453   469   Psort
                                            Transmembrane     480   496   Psort

FN0258    cadmium, zinc and cobalt          Cleavable N-term  1     41    Psort
          transporting ATPase               signal seq
                                            Transmembrane     176   192   Psort
                                            Transmembrane     234   250   Psort
                                            Transmembrane     262   278   Psort
                                            Transmembrane     566   582   Psort
                                            Transmembrane     587   603   Psort

FN0262    formate acetyltransferase         Transmembrane     512   528   Psort
          (pyruvate formate-lyase)

FN0264    Adhesion protein FadA             Cleavable N-term  1     18    Psort
                                            signal seq

FN0265    predicted cell division protein   Transmembrane     25    41    Psort
          (FtsX)/possible ABC permease
                                            Transmembrane     171   187   Psort
                                            Transmembrane     216   232   Psort
                                            Transmembrane     251   267   Psort

FN0266    peptidase, M23/M37 family         Uncleavable N-    1     19    Psort
          protein                           term signal seq
                                            Transmembrane     3     19    Psort

FN0270    GTP-binding protein (Era)         Transmembrane     75    91    Psort

FN0271    enoyl-CoA hydratase               Transmembrane     102   118   Psort

FN0276    Na+-dependent phosphate           Transmembrane     33    49    Psort
          transporter
                                            Transmembrane     51    67    Psort
                                            Transmembrane     73    89    Psort
                                            Transmembrane     119   135   Psort
                                            Transmembrane     161   177   Psort
                                            Transmembrane     235   251   Psort
                                            Transmembrane     282   298   Psort

FN0279    lipoprotein                       Uncleavable N-    1     22    Psort
                                            term signal seq
                                            Transmembrane     3     19    Psort

FN0280    Fusobacterium-specific protein,   Cleavable N-term  1     20    Psort
          uncharacterized                   signal seq

FN0281    DNA polymerase III, alpha         Transmembrane     1391  1407  Psort
          subunit

FN0288    hypoxanthine-guanine              Transmembrane     44    60    Psort
          phosphoribosyltransferase

FN0289    Fusobacterium-specific protein,   Cleavable N-term  1     58    Psort
          uncharacterized                   signal seq

FN0291    hemolysin/hemagglutinin-like      Cleavable N-term  1     24    Psort
          protein                           signal seq

FN0301    iron (III) ABC transporter,       Uncleavable N-    1     34    Psort
          permease protein                  term signal seq
                                            Transmembrane     18    34    Psort
                                            Transmembrane     77    93    Psort
                                            Transmembrane     109   125   Psort
                                            Transmembrane     135   151   Psort
                                            Transmembrane     211   227   Psort
                                            Transmembrane     258   274   Psort
                                            Transmembrane     295   311   Psort
                                            Transmembrane     322   338   Psort

FN0303    nitrogenase iron protein          Transmembrane     116   132   Psort

FN0304    nitrogenase associated protein    Transmembrane     112   128   Psort
                                            Transmembrane     299   315   Psort

FN0306    iron(III) ABC transporter,        Uncleavable N-    1     42    Psort
          permease protein                  term signal seq
                                            Transmembrane     11    27    Psort
                                            Transmembrane     66    82    Psort
                                            Transmembrane     96    112   Psort
                                            Transmembrane     119   135   Psort
                                            Transmembrane     149   165   Psort
                                            Transmembrane     197   213   Psort
                                            Transmembrane     240   256   Psort
                                            Transmembrane     282   298   Psort
                                            Transmembrane     311   327   Psort

FN0307    iron(III) ABC transporter, ATP-   Transmembrane     147   163   Psort
          binding protein

FN0308    iron compound ABC transporter,    May be a                      Psort
          periplasmic iron compound-        lipotein (signal
          binding protein

FN0309    ABC transporter, permease         Cleavable N-term  1     46    Psort
          protein (possible iron            signal seq
          transport)
                                            Transmembrane     72    88    Psort
                                            Transmembrane     152   168   Psort
                                            Transmembrane     199   215   Psort
                                            Transmembrane     256   272   Psort
                                            Transmembrane     302   318   Psort
                                            Transmembrane     368   384   Psort
                                            Transmembrane     408   424   Psort
                                            Transmembrane     430   446   Psort
                                            Transmembrane     480   496   Psort
                                            Transmembrane     534   550   Psort

FN0322    fructose-bisphosphate aldolase    Transmembrane     159   175   Psort

FN0328    sodium:alanine symporter family   Transmembrane     40    56    Psort
          protein (D-alanine-glycine
          permease)
                                            Transmembrane     178   194   Psort
                                            Transmembrane     217   233   Psort
                                            Transmembrane     246   262   Psort
                                            Transmembrane     338   354   Psort
                                            Transmembrane     383   399   Psort
                                            Transmembrane     416   432   Psort
                                            Transmembrane     450   466   Psort

FN0332    magnesium and cobalt transport    Transmembrane     168   184   Psort
          protein
                                            Transmembrane     293   309   Psort
                                            Transmembrane     327   343   Psort

FN0335    outer membrane protein, porin F   Uncleavable N-    1     13    Psort
          precursor                         term signal seq

FN0338    hypothetical protein              Transmembrane     33    49    Psort
                                            Transmembrane     61    77    Psort

FN0340    conserved hypothetical protein    Uncleavable N-    1     26    Psort
          (possible Na+ dependent           term signal seq
          nucleoside transporter)
                                            Transmembrane     11    27    Psort
                                            Transmembrane     54    70    Psort
                                            Transmembrane     81    97    Psort
                                            Transmembrane     123   139   Psort
                                            Transmembrane     166   182   Psort
                                            Transmembrane     199   215   Psort
                                            Transmembrane     227   243   Psort
                                            Transmembrane     306   322   Psort
                                            Transmembrane     354   370   Psort
                                            Transmembrane     379   395   Psort
                                            Transmembrane     418   434   Psort

FN0341    transport protein, possible       Cleavable N-term  1     40    Psort
          Na+/H+ antiporter                 signal seq
                                            Transmembrane     97    113   Psort
                                            Transmembrane     115   131   Psort
                                            Transmembrane     154   170   Psort
                                            Transmembrane     190   206   Psort
                                            Transmembrane     235   251   Psort
                                            Transmembrane     263   279   Psort
                                            Transmembrane     290   306   Psort
                                            Transmembrane     335   351   Psort
                                            Transmembrane     360   376   Psort
                                            Transmembrane     427   443   Psort

FN0342    peptidyl-prolyl cis-trans         Transmembrane     18    34    Psort
          isomerase

FN0345    possible membrane permease        Uncleavable N-    1     20    Psort
                                            term signal seq
                                            Transmembrane     9     25    Psort
                                            Transmembrane     43    59    Psort
                                            Transmembrane     135   151   Psort
                                            Transmembrane     196   212   Psort
                                            Transmembrane     218   234   Psort
                                            Transmembrane     237   253   Psort
                                            Transmembrane     256   272   Psort
                                            Transmembrane     287   303   Psort
                                            Transmembrane     304   320   Psort

FN0346    Fusobacterium-specific protein,   Uncleavable N-    1     37    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     13    29    Psort

FN0348    nicotinate                        Transmembrane     51    67    Psort
          phosphoribosyltransferase

FN0350    hypothetical protein              Cleavable N-term  1     24    Psort
                                            signal seq
                                            Transmembrane     31    47    Psort

FN0351    Fusobacterium-specific protein,   Uncleavable N-    1     59    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     3     19    Psort

FN0352    Na+/H+ antiporter (NhaC)          Uncleavable N-    1     33    Psort
                                            term signal seq
                                            Transmembrane     15    31    Psort
                                            Transmembrane     39    55    Psort
                                            Transmembrane     77    93    Psort
                                            Transmembrane     112   128   Psort
                                            Transmembrane     198   214   Psort
                                            Transmembrane     241   257   Psort
                                            Transmembrane     260   276   Psort
                                            Transmembrane     321   337   Psort
                                            Transmembrane     354   370   Psort
                                            Transmembrane     411   427   Psort
                                            Transmembrane     435   451   Psort

FN0354    possible permease of the          Cleavable N-term  1     18    Psort
          drug/metabolite transporter       signal seq
          (DMT) superfamily
                                            Transmembrane     36    52    Psort
                                            Transmembrane     59    75    Psort
                                            Transmembrane     87    103   Psort
                                            Transmembrane     115   131   Psort
                                            Transmembrane     145   161   Psort
                                            Transmembrane     182   198   Psort
                                            Transmembrane     204   220   Psort

FN0358    ATP synthase beta chain, sodium   Uncleavable N-    1     57    Psort
          ion specific                      term signal seq

FN0362    ATP synthase B chain, sodium ion  Uncleavable N-    1     28    Psort
          specific                          term signal seq
                                            Transmembrane     8     24    Psort

FN0363    ATP synthase C chain, sodium ion  Uncleavable N-    1     17    Psort
          specific                          term signal seq
                                            Transmembrane     9     25    Psort
                                            Transmembrane     69    85    Psort

FN0364    ATP synthase A chain, sodium ion  Uncleavable N-    1     19    Psort
          specific                          term signal seq
                                            Transmembrane     2     18    Psort
                                            Transmembrane     58    74    Psort
                                            Transmembrane     103   119   Psort
                                            Transmembrane     163   179   Psort
                                            Transmembrane     189   205   Psort

FN0365    Fusobacterium-specific protein,   Cleavable N-term  1     39    Psort
          possible ATP synthase protein I   signal seq
          (sodium ion specific)

FN0367    conserved hypothetical protein    Uncleavable N-    1     48    Psort
          (predicted integral membrane      term signal seq
          protein)
                                            Transmembrane     9     25    Psort
                                            Transmembrane     61    77    Psort
                                            Transmembrane     81    97    Psort
                                            Transmembrane     119   135   Psort
                                            Transmembrane     141   157   Psort

FN0368    adenylosuccinate lyase            Transmembrane     332   348   Psort

FN0369    ribosomal-protein-alanine         Transmembrane     59    75    Psort
          acetyltransferase

FN0370    signal peptidase I                Uncleavable N-    1     22    Psort
                                            term signal seq
                                            Transmembrane     4     20    Psort
                                            Transmembrane     61    77    Psort

FN0371    Fusobacterium-specific protein,   Cleavable N-term  1     31    Psort
          uncharacterized                   signal seq

FN0373    hypothetical protein              Uncleavable N-    1     22    Psort
                                            term signal seq

FN0374    single-stranded DNA-specific      Transmembrane     213   229   Psort
          exonuclease

FN0375    ABC transporter for iron(III)     May be a                      Psort
          transport, iron(III)-binding      lipotein (signal
          periplasmic protein

FN0377    iron(III)-transport system,       Uncleavable N-    1     20    Psort
          permease protein                  term signal seq
                                            Transmembrane     10    26    Psort
                                            Transmembrane     69    85    Psort
                                            Transmembrane     98    114   Psort
                                            Transmembrane     149   165   Psort
                                            Transmembrane     194   210   Psort
                                            Transmembrane     251   267   Psort
                                            Transmembrane     292   308   Psort
                                            Transmembrane     359   375   Psort
                                            Transmembrane     389   405   Psort
                                            Transmembrane     412   428   Psort
                                            Transmembrane     472   488   Psort
                                            Transmembrane     524   540   Psort

FN0379    Fusobacterium-specific protein,   Uncleavable N-    1     45    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     8     24    Psort
                                            Transmembrane     33    49    Psort
                                            Transmembrane     54    70    Psort
                                            Transmembrane     90    106   Psort

FN0380    conserved hypothetical protein    Uncleavable N-    1     47    Psort
          (possible membrane protein)       term signal seq
                                            Transmembrane     12    28    Psort

FN0382    Fusobacterium-specific protein,   Transmembrane     28    44    Psort
          uncharacterized
                                            Transmembrane     52    68    Psort

FN0384    conserved hypothetical protein    Transmembrane     25    41    Psort
          (predicted membrane spanning
          protein)
                                            Transmembrane     62    78    Psort
                                            Transmembrane     109   125   Psort
                                            Transmembrane     139   155   Psort
                                            Transmembrane     163   179   Psort
                                            Transmembrane     195   211   Psort
                                            Transmembrane     241   257   Psort
                                            Transmembrane     282   298   Psort
                                            Transmembrane     345   361   Psort
                                            Transmembrane     383   399   Psort
                                            Transmembrane     404   420   Psort
                                            Transmembrane     431   447   Psort
                                            Transmembrane     485   501   Psort

FN0389    Fusobacterium-specific protein,   Cleavable N-term  1     13    Psort
          uncharacterized                   signal seq

FN0392    oxygen-independent                Transmembrane     161   177   Psort
          coproporphyrinogen III oxidase

FN0394    predicted outer membrane protein  Cleavable N-term  1     18    Psort
          (Fomp)                            signal seq

FN0395    possible permease of the          Cleavable N-term  1     51    Psort
          drug/metabolite transporter       signal seq
          (DMT) superfamily
                                            Transmembrane     100   116   Psort
                                            Transmembrane     125   141   Psort
                                            Transmembrane     151   167   Psort
                                            Transmembrane     180   196   Psort
                                            Transmembrane     204   220   Psort
                                            Transmembrane     243   259   Psort
                                            Transmembrane     262   278   Psort

FN0396    dipeptide ABC transporter,        May be a                      Psort
          periplasmic dipeptide-binding     lipotein (signal
          protein

FN0397    dipeptide ABC transporter,        Uncleavable N-    1     49    Psort
          permease protein                  term signal seq
                                            Transmembrane     10    26    Psort
                                            Transmembrane     98    114   Psort
                                            Transmembrane     138   154   Psort
                                            Transmembrane     173   189   Psort
                                            Transmembrane     227   243   Psort
                                            Transmembrane     276   292   Psort

FN0398    dipeptide ABC transporter,        Transmembrane     25    41    Psort
          permease protein
                                            Transmembrane     95    111   Psort
                                            Transmembrane     129   145   Psort
                                            Transmembrane     205   221   Psort
                                            Transmembrane     260   276   Psort

FN0399    oligopeptide ABC transporter,     Transmembrane     164   180   Psort
          ATP-binding protein

FN0401    hypothetical protein              Cleavable N-term  1     17    Psort
                                            signal seq

FN0404    hypothetical protein              Uncleavable N-    1     22    Psort
                                            term signal seq

FN0407    Fusobacterium-specific protein,   May be a                      Psort
          uncharacterized                   lipotein (signal

FN0421    carbamoyl-phosphate synthase,     Transmembrane     173   189   Psort
          small subunit
                                            Transmembrane     241   257   Psort

FN0438    branched chain amino acid         Cleavable N-term  1     23    Psort
          transport system II carrier       signal seq
          protein
                                            Transmembrane     39    55    Psort
                                            Transmembrane     80    96    Psort
                                            Transmembrane     116   132   Psort
                                            Transmembrane     146   162   Psort
                                            Transmembrane     181   197   Psort
                                            Transmembrane     228   244   Psort
                                            Transmembrane     271   287   Psort
                                            Transmembrane     308   324   Psort
                                            Transmembrane     330   346   Psort
                                            Transmembrane     367   383   Psort

FN0443    hypothetical protein              Uncleavable N-    1     23    Psort
                                            term signal seq
                                            Transmembrane     10    26    Psort

FN0445    hypothetical protein              Transmembrane     200   216   Psort

FN0446    hypothetical protein              Transmembrane     33    49    Psort
                                            Transmembrane     66    82    Psort
                                            Transmembrane     846   862   Psort

FN0447    selenocysteine lyase, NifS        Transmembrane     144   160   Psort
          family

FN0450    predicted ABC transporter, ATP-   Transmembrane     564   580   Psort
          binding protein

FN0452    glucosamine--fructose-6-          Transmembrane     507   523   Psort
          phosphate aminotransferase
          (isomerizing)

FN0457    hypothetical protein              Uncleavable N-    1     55    Psort
                                            term signal seq
                                            Transmembrane     2     18    Psort
                                            Transmembrane     43    59    Psort
                                            Transmembrane     68    84    Psort
                                            Transmembrane     118   134   Psort

FN0458    Fusobacterium-specific protein,   Cleavable N-term  1     21    Psort
          uncharacterized                   signal seq

FN0459    Fusobacterium-specific protein,   Uncleavable N-    1     13    Psort
          uncharacterized                   term signal seq

FN0465    Fusobacterium-specific protein,   Uncleavable N-    1     23    Psort
          uncharacterized                   term signal seq

FN0466    lysyl-tRNA synthetase             Transmembrane     470   486   Psort

FN0467    murein hydrolase exporter         Uncleavable N-    1     46    Psort
                                            term signal seq
                                            Transmembrane     6     22    Psort
                                            Transmembrane     29    45    Psort
                                            Transmembrane     84    100   Psort

FN0468    murein hydrolase export           Uncleavable N-    1     56    Psort
          regulator                         term signal seq
                                            Transmembrane     4     20    Psort
                                            Transmembrane     38    54    Psort
                                            Transmembrane     65    81    Psort
                                            Transmembrane     98    114   Psort
                                            Transmembrane     144   160   Psort
                                            Transmembrane     210   226   Psort

FN0470    probable efflux pump component    Transmembrane     29    45    Psort
                                            Transmembrane     93    109   Psort
                                            Transmembrane     130   146   Psort
                                            Transmembrane     148   164   Psort
                                            Transmembrane     221   237   Psort
                                            Transmembrane     270   286   Psort
                                            Transmembrane     305   321   Psort
                                            Transmembrane     387   403   Psort
                                            Transmembrane     445   461   Psort
                                            Transmembrane     481   497   Psort

FN0471    possible adhesin protein          Cleavable N-term  1     19    Psort
                                            signal seq

FN0474    acriflavine resistance protein    Transmembrane     20    36    Psort
                                            Transmembrane     342   358   Psort
                                            Transmembrane     365   381   Psort
                                            Transmembrane     388   404   Psort
                                            Transmembrane     440   456   Psort
                                            Transmembrane     471   487   Psort
                                            Transmembrane     528   544   Psort
                                            Transmembrane     849   865   Psort
                                            Transmembrane     878   894   Psort
                                            Transmembrane     899   915   Psort
                                            Transmembrane     950   966   Psort
                                            Transmembrane     980   996   Psort

FN0480    hypothetical protein              Transmembrane     26    42    Psort

FN0481    hypothetical protein              Cleavable N-term  1     18    Psort
                                            signal seq

FN0483    uracil phosphoribosyltransferase  Transmembrane     77    93    Psort
                                            Transmembrane     160   176   Psort

FN0489    prolipoprotein diacylglyceryl     Transmembrane     50    66    Psort
          transferase
                                            Transmembrane     87    103   Psort
                                            Transmembrane     206   222   Psort
                                            Transmembrane     264   280   Psort

FN0490    integral membrane protein         Cleavable N-term  1     26    Psort
                                            signal seq
                                            Transmembrane     54    70    Psort
                                            Transmembrane     85    101   Psort
                                            Transmembrane     113   129   Psort
                                            Transmembrane     156   172   Psort
                                            Transmembrane     208   224   Psort
                                            Transmembrane     242   258   Psort

FN0492    hypothetical protein              Transmembrane     24    40    Psort
                                            Transmembrane     44    60    Psort

FN0495    acetyl-CoA acetyltransferase      Transmembrane     382   398   Psort

FN0499    tonB-dependent receptor/hemin     Uncleavable N-    1     14    Psort
          receptor                          term signal seq

FN0504    amino acid permease               Cleavable N-term  1     53    Psort
                                            signal seq
                                            Transmembrane     120   136   Psort
                                            Transmembrane     152   168   Psort
                                            Transmembrane     195   211   Psort
                                            Transmembrane     234   250   Psort
                                            Transmembrane     279   295   Psort
                                            Transmembrane     326   342   Psort
                                            Transmembrane     359   375   Psort
                                            Transmembrane     389   405   Psort
                                            Transmembrane     431   447   Psort

FN0507    hypothetical protein              Uncleavable N-    1     50    Psort
                                            term signal seq
                                            Transmembrane     2     18    Psort

FN0509    transposase                       Transmembrane     267   283   Psort

FN0510    hypothetical protein              Uncleavable N-    1     39    Psort
                                            term signal seq
                                            Transmembrane     15    31    Psort

FN0514    hypothetical protein              Cleavable N-term  1     32    Psort
                                            signal seq
                                            Transmembrane     52    68    Psort
                                            Transmembrane     104   120   Psort

FN0515    cation/multidrug efflux pump,     Uncleavable N-    1     28    Psort
          AcrB/D/F family                   term signal seq
                                            Transmembrane     12    28    Psort
                                            Transmembrane     342   358   Psort
                                            Transmembrane     366   382   Psort
                                            Transmembrane     397   413   Psort
                                            Transmembrane     437   453   Psort
                                            Transmembrane     469   485   Psort
                                            Transmembrane     529   545   Psort
                                            Transmembrane     866   882   Psort
                                            Transmembrane     888   904   Psort
                                            Transmembrane     912   928   Psort
                                            Transmembrane     964   980   Psort
                                            Transmembrane     989   1005  Psort

FN0516    multidrug resistance protein      May be a                      Psort
          (efflux transporter)              lipotein (signal

FN0519    conserved hypothetical protein    Cleavable N-term  1     19    Psort
          (predicted exported 24-amino      signal seq
          acid repeat protein)

FN0520    hypothetical protein              Cleavable N-term  1     46    Psort
                                            signal seq
                                            Transmembrane     60    76    Psort
                                            Transmembrane     89    105   Psort

FN0530    hypothetical protein              Uncleavable N-    1     22    Psort
                                            term signal seq

FN0531    hypothetical protein              Uncleavable N-    1     25    Psort
                                            term signal seq
                                            Transmembrane     8     24    Psort

FN0532    conserved hypothetical protein    Uncleavable N-    1     59    Psort
          (predicted membrane-spanning      term signal seq
          protein)
                                            Transmembrane     3     19    Psort
                                            Transmembrane     28    44    Psort
                                            Transmembrane     81    97    Psort
                                            Transmembrane     139   155   Psort
                                            Transmembrane     194   210   Psort
                                            Transmembrane     272   288   Psort
                                            Transmembrane     335   351   Psort

FN0533    conserved hypothetical protein    Uncleavable N-    1     34    Psort
          (possible membrane-spanning       term signal seq
          protein)
                                            Transmembrane     5     21    Psort
                                            Transmembrane     27    43    Psort
                                            Transmembrane     66    82    Psort
                                            Transmembrane     89    105   Psort
                                            Transmembrane     114   130   Psort
                                            Transmembrane     147   163   Psort
                                            Transmembrane     213   229   Psort
                                            Transmembrane     248   264   Psort
                                            Transmembrane     293   309   Psort
                                            Transmembrane     323   339   Psort

FN0534    hypothetical protein              Transmembrane     50    66    Psort
                                            Transmembrane     88    104   Psort

FN0535    possible lysine decarboxylase     Transmembrane     119   135   Psort
          regulator LysR; possible cadA
          related

FN0536    DNA polymerase III, beta subunit  Uncleavable N-    1     61    Psort
                                            term signal seq

FN0537    conserved hypothetical protein    Uncleavable N-    1     15    Psort
          (predicted membrane-spanning      term signal seq
          protein)
                                            Transmembrane     2     18    Psort
                                            Transmembrane     52    68    Psort
                                            Transmembrane     82    98    Psort
                                            Transmembrane     115   131   Psort
                                            Transmembrane     138   154   Psort
                                            Transmembrane     159   175   Psort

FN0538    preprotein translocase, SecG      Cleavable N-term  1     29    Psort
          subunit                           signal seq
                                            Transmembrane     56    72    Psort

FN0540    glutamate-1-semialdehyde 2,1-     Transmembrane     348   364   Psort
          aminotransferase

FN0542    beta-1,4-glucosyltransferase      Uncleavable N-    1     31    Psort
                                            term signal seq

FN0544    ADP-heptose--LPS                  Uncleavable N-    1     19    Psort
          heptosyltransferase II            term signal seq
                                            Transmembrane     3     19    Psort

FN0546    lipopolysaccharide core           Uncleavable N-    1     27    Psort
          biosynthesis protein rfaQ         term signal seq
                                            Transmembrane     7     23    Psort

FN0547    recA protein (Recombinase A)      Transmembrane     152   168   Psort

FN0549    O-sialoglycoprotein               Transmembrane     76    92    Psort
          endopeptidase

FN0553    D-serine dehydratase/possible     Transmembrane     169   185   Psort
          DsdX transporter
                                            Transmembrane     296   312   Psort

FN0554    ABC transporter, gluconate        Uncleavable N-    1     43    Psort
          permease                          term signal seq
                                            Transmembrane     6     22    Psort
                                            Transmembrane     26    42    Psort
                                            Transmembrane     62    78    Psort
                                            Transmembrane     112   128   Psort
                                            Transmembrane     179   195   Psort
                                            Transmembrane     225   241   Psort
                                            Transmembrane     264   280   Psort
                                            Transmembrane     309   325   Psort
                                            Transmembrane     336   352   Psort
                                            Transmembrane     362   378   Psort
                                            Transmembrane     385   401   Psort
                                            Transmembrane     434   450   Psort

FN0556    Fusobacterium-specific protein,   Uncleavable N-    1     22    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     4     20    Psort

FN0557    Fusobacterium-specific protein,   Uncleavable N-    1     23    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     5     21    Psort

FN0564    conserved hypothetical protein    Uncleavable N-    1     53    Psort
                                            term signal seq

FN0565    Fusobacterium-specific protein,   Uncleavable N-    1     19    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     60    76    Psort
                                            Transmembrane     78    94    Psort
                                            Transmembrane     102   118   Psort

FN0566    hypothetical protein              Transmembrane     301   317   Psort

FN0567    hypothetical protein              Cleavable N-term  1     40    Psort
                                            signal seq
                                            Transmembrane     47    63    Psort

FN0569    Fusobacterium-specific protein,   Transmembrane     295   311   Psort
          possible phosphatidylinositol-4-
          phosphate 5-kinase
                                            Transmembrane     374   390   Psort

FN0570    Fusobacterium-specific  protein,  Cleavable N-term  1     19    Psort
          uncharacterized                   signal seq
                                            Transmembrane     63    79    Psort
                                            Transmembrane     99    115   Psort
                                            Transmembrane     134   150   Psort

FN0571    DNA processing chain A; probable  Uncleavable N-    1     17    Psort
          smf protein                       term signal seq

FN0572    hypothetical protein              Transmembrane     20    36    Psort

FN0578    ATP-dependent DNA helicase        Transmembrane     62    78    Psort

FN0579    conserved hypothetical protein    Uncleavable N-    1     15    Psort
          (possible lipoprotein)            term signal seq

FN0581    lipoprotein ABC transporter,      Uncleavable N-    1     41    Psort
          permease protein                  term signal seq
                                            Transmembrane     22    38    Psort
                                            Transmembrane     255   271   Psort
                                            Transmembrane     308   324   Psort
                                            Transmembrane     355   371   Psort

FN0586    two-component sensor histidine    Transmembrane     25    41    Psort
          kinase
                                            Transmembrane     149   165   Psort

FN0587    conserved hypothetical protein    Uncleavable N-    1     56    Psort
          (predicted membrane-spanning      term signal seq
          protein)

FN0589    transcriptional regulator, MarR   Uncleavable N-    1     38    Psort
          family                            term signal seq

FN0591    aminobenzoyl-glutamate transport  Transmembrane     34    50    Psort
          protein
                                            Transmembrane     91    107   Psort
                                            Transmembrane     128   144   Psort
                                            Transmembrane     146   162   Psort
                                            Transmembrane     167   183   Psort
                                            Transmembrane     223   239   Psort
                                            Transmembrane     269   285   Psort
                                            Transmembrane     307   323   Psort
                                            Transmembrane     349   365   Psort
                                            Transmembrane     392   408   Psort
                                            Transmembrane     414   430   Psort
                                            Transmembrane     484   500   Psort

FN0593    UDP-3-O-[3-hydroxymyristoyl] N-   Transmembrane     85    101   Psort
          acetylglucosamine deacetylase

FN0594    (3R)-hydroxymyristoyl-acyl        Transmembrane     58    74    Psort
          carrier protein dehydrase

FN0596    conserved hypothetical protein    Transmembrane     106   122   Psort

FN0597    lipid-A-disaccharide synthase     Transmembrane     252   268   Psort

FN0598    ABC transporter, ATP-binding      Transmembrane     25    41    Psort
          protein
                                            Transmembrane     62    78    Psort
                                            Transmembrane     136   152   Psort
                                            Transmembrane     163   179   Psort
                                            Transmembrane     258   274   Psort

FN0604    proton/sodium:glutamate           Uncleavable N-    1     53    Psort
          symporter protein                 term signal seq
                                            Transmembrane     10    26    Psort
                                            Transmembrane     39    55    Psort
                                            Transmembrane     79    95    Psort
                                            Transmembrane     140   156   Psort
                                            Transmembrane     184   200   Psort
                                            Transmembrane     211   227   Psort
                                            Transmembrane     296   312   Psort
                                            Transmembrane     315   331   Psort
                                            Transmembrane     352   368   Psort

FN0612    Fusobacterium-specific protein,   Uncleavable N-    1     17    Psort
          uncharacterized                   term signal seq

FN0613    Fusobacterium-specific protein,   Cleavable N-term  1     18    Psort
          uncharacterized                   signal seq

FN0614    ABC transporter, ATP-binding      Transmembrane     33    49    Psort
          protein
                                            Transmembrane     74    90    Psort
                                            Transmembrane     148   164   Psort
                                            Transmembrane     169   185   Psort
                                            Transmembrane     255   271   Psort
                                            Transmembrane     281   297   Psort

FN0615    ABC transporter, ATP-binding      Transmembrane     25    41    Psort
          protein
                                            Transmembrane     61    77    Psort
                                            Transmembrane     137   153   Psort
                                            Transmembrane     158   174   Psort
                                            Transmembrane     242   258   Psort
                                            Transmembrane     272   288   Psort

FN0618    spermidine/putrescine ABC         Uncleavable N-    1     18    Psort
          transporter, periplasmic binding  term signal seq
          protein
                                            Transmembrane     4     20    Psort

FN0619    small-conductance                 Uncleavable N-    1     34    Psort
          mechanosensitive channel          term signal seq
                                            Transmembrane     13    29    Psort
                                            Transmembrane     64    80    Psort
                                            Transmembrane     84    100   Psort

FN0621    4-hydroxybutyrate coenzyme A      Transmembrane     213   229   Psort
          transferase

FN0623    conserved hypothetical protein    Uncleavable N-    1     55    Psort
          (predicted malate transport       term signal seq
          protein)
                                            Transmembrane     7     23    Psort
                                            Transmembrane     40    56    Psort
                                            Transmembrane     78    94    Psort
                                            Transmembrane     137   153   Psort
                                            Transmembrane     175   191   Psort
                                            Transmembrane     204   220   Psort
                                            Transmembrane     259   275   Psort
                                            Transmembrane     293   309   Psort

FN0624    Na+/H+ antiporter (NhaC)          Uncleavable N-    1     40    Psort
                                            term signal seq
                                            Transmembrane     23    39    Psort
                                            Transmembrane     52    68    Psort
                                            Transmembrane     86    102   Psort
                                            Transmembrane     120   136   Psort
                                            Transmembrane     208   224   Psort
                                            Transmembrane     246   262   Psort
                                            Transmembrane     263   279   Psort
                                            Transmembrane     296   312   Psort
                                            Transmembrane     345   361   Psort
                                            Transmembrane     378   394   Psort
                                            Transmembrane     398   414   Psort
                                            Transmembrane     420   436   Psort

FN0627    possible phosphosugar isomerase   Transmembrane     38    54    Psort

FN0628    glucosamine--fructose-6-          Transmembrane     151   167   Psort
          phosphate aminotransferase
                                            Transmembrane     312   328   Psort

FN0629    PTS system, IID component         Transmembrane     147   163   Psort
                                            Transmembrane     192   208   Psort
                                            Transmembrane     236   252   Psort
                                            Transmembrane     262   278   Psort

FN0630    PTS system, IIC component         Cleavable N-term  1     16    Psort
                                            signal seq
                                            Transmembrane     46    62    Psort
                                            Transmembrane     88    104   Psort
                                            Transmembrane     138   154   Psort
                                            Transmembrane     178   194   Psort
                                            Transmembrane     196   212   Psort
                                            Transmembrane     218   234   Psort

FN0635    tRNA-pseudouridine synthase B     Transmembrane     40    56    Psort

FN0640    CAAX amino terminal protease      Uncleavable N-    1     30    Psort
          family protein/possible           term signal seq
          transporter
                                            Transmembrane     18    34    Psort
                                            Transmembrane     38    54    Psort
                                            Transmembrane     66    82    Psort
                                            Transmembrane     103   119   Psort
                                            Transmembrane     132   148   Psort
                                            Transmembrane     165   181   Psort
                                            Transmembrane     190   206   Psort
                                            Transmembrane     215   231   Psort
                                            Transmembrane     267   283   Psort

FN0646    glutamyl-tRNA reductase           Transmembrane     175   191   Psort

FN0650    Na+/H+ antiporter (NhaC)          Cleavable N-term  1     51    Psort
                                            signal seq
                                            Transmembrane     74    90    Psort
                                            Transmembrane     113   129   Psort
                                            Transmembrane     150   166   Psort
                                            Transmembrane     198   214   Psort
                                            Transmembrane     244   260   Psort
                                            Transmembrane     267   283   Psort
                                            Transmembrane     361   377   Psort
                                            Transmembrane     443   459   Psort

FN0655    Fusobacterium-specific protein,   Cleavable N-term  1     14    Psort
          uncharacterized                   signal seq

FN0656    Fusobacterium-specific protein,   Cleavable N-term  1     25    Psort
          uncharacterized                   signal seq

FN0658    lipoprotein, NLPA family          Cleavable N-term  1     22    Psort
          (possible ABC substrate-binding   signal seq
          protein)

FN0659    ABC transporter, permease         Transmembrane     18    34    Psort
          protein
                                            Transmembrane     37    53    Psort
                                            Transmembrane     81    97    Psort
                                            Transmembrane     105   121   Psort
                                            Transmembrane     155   171   Psort
                                            Transmembrane     200   216   Psort

FN0664    probable 2-nitropropane           Transmembrane     141   157   Psort
          dioxygenase

FN0667    Na+ driven multidrug efflux pump  Transmembrane     17    33    Psort
                                            Transmembrane     67    83    Psort
                                            Transmembrane     103   119   Psort
                                            Transmembrane     138   154   Psort
                                            Transmembrane     188   204   Psort
                                            Transmembrane     322   338   Psort
                                            Transmembrane     395   411   Psort

FN0668    cation ABC transporter,           May be a                      Psort
          periplasmic binding protein       lipotein (signal
          (possible Mn/Zn uptake)

FN0670    ABC transporter, permease         Cleavable N-term  1     53    Psort
          protein (possible cation uptake)  signal seq
                                            Transmembrane     69    85    Psort
                                            Transmembrane     99    115   Psort
                                            Transmembrane     145   161   Psort
                                            Transmembrane     193   209   Psort
                                            Transmembrane     228   244   Psort
                                            Transmembrane     261   277   Psort

FN0671    cation ABC transporter, permease  Uncleavable N-    1     38    Psort
          protein (possible Mn/Zn           term signal seq
          transporting)
                                            Transmembrane     10    26    Psort
                                            Transmembrane     36    52    Psort
                                            Transmembrane     59    75    Psort
                                            Transmembrane     89    105   Psort
                                            Transmembrane     143   159   Psort
                                            Transmembrane     187   203   Psort
                                            Transmembrane     206   222   Psort
                                            Transmembrane     235   251   Psort
                                            Transmembrane     255   271   Psort

FN0673    conserved hypothetical protein    Transmembrane     46    62    Psort
          (possible EBSC protein)

FN0674    permease of the drug/metabolite   Uncleavable N-    1     25    Psort
          transporter (DMT) superfamily     term signal seq
                                            Transmembrane     9     25    Psort
                                            Transmembrane     37    53    Psort
                                            Transmembrane     70    86    Psort
                                            Transmembrane     96    112   Psort
                                            Transmembrane     121   137   Psort
                                            Transmembrane     148   164   Psort
                                            Transmembrane     175   191   Psort
                                            Transmembrane     208   224   Psort
                                            Transmembrane     236   252   Psort
                                            Transmembrane     264   280   Psort

FN0678    serine/threonine protein kinase   Transmembrane     37    53    Psort

FN0679    probable GTPase                   Transmembrane     88    104   Psort

FN0682    fibronectin/fibrinogen binding    Transmembrane     43    59    Psort
          protein

FN0684    prismane protein, hybrid-cluster  Transmembrane     505   521   Psort
          protein

FN0685    sodium/pantothenate symporter     Cleavable N-term  1     61    Psort
                                            signal seq
                                            Transmembrane     79    95    Psort
                                            Transmembrane     127   143   Psort
                                            Transmembrane     157   173   Psort
                                            Transmembrane     189   205   Psort
                                            Transmembrane     238   254   Psort
                                            Transmembrane     275   291   Psort
                                            Transmembrane     317   333   Psort
                                            Transmembrane     376   392   Psort
                                            Transmembrane     397   413   Psort
                                            Transmembrane     426   442   Psort
                                            Transmembrane     452   468   Psort

FN0686    conserved hypothetical protein    Transmembrane     25    41    Psort
          (possible integral membrane
          protein)
                                            Transmembrane     67    83    Psort

FN0687    hypothetical protein              Transmembrane     375   391   Psort

FN0691    Fusobacterium-specific protein,   Cleavable N-term  1     46    Psort
          uncharacterized                   signal seq

FN0699    preprotein translocase, SecD      Cleavable N-term  1     25    Psort
          subunit                           signal seq
                                            Transmembrane     244   260   Psort
                                            Transmembrane     269   285   Psort
                                            Transmembrane     289   305   Psort
                                            Transmembrane     346   362   Psort
                                            Transmembrane     365   381   Psort

FN0700    preprotein translocase, SecF      Cleavable N-term  1     33    Psort
          subunit                           signal seq
                                            Transmembrane     135   151   Psort
                                            Transmembrane     162   178   Psort
                                            Transmembrane     183   199   Psort
                                            Transmembrane     241   257   Psort
                                            Transmembrane     262   278   Psort

FN0703    N-acyl-L-amino acid               Transmembrane     81    97    Psort
          amidohydrolase

FN0704    conserved hypothetical protein    Transmembrane     47    63    Psort
          (possible membrane protein)

FN0709    virulence factor (MviN)           Transmembrane     88    104   Psort
                                            Transmembrane     121   137   Psort
                                            Transmembrane     153   169   Psort
                                            Transmembrane     187   203   Psort
                                            Transmembrane     220   236   Psort
                                            Transmembrane     265   281   Psort
                                            Transmembrane     307   323   Psort
                                            Transmembrane     348   364   Psort
                                            Transmembrane     380   396   Psort
                                            Transmembrane     406   422   Psort
                                            Transmembrane     435   451   Psort
                                            Transmembrane     459   475   Psort

FN0712    chromate transport protein        Uncleavable N-    1     56    Psort
                                            term signal seq
                                            Transmembrane     6     22    Psort
                                            Transmembrane     86    102   Psort
                                            Transmembrane     111   127   Psort
                                            Transmembrane     143   159   Psort
                                            Transmembrane     161   177   Psort

FN0713    chromate transport protein        Transmembrane     82    98    Psort
                                            Transmembrane     116   132   Psort
                                            Transmembrane     143   159   Psort
                                            Transmembrane     161   177   Psort

FN0714    NADH:flavin oxidoreductase, Old   Transmembrane     48    64    Psort
          Yellow Enzyme family

FN0715    Fusobacterium-specific protein,   Transmembrane     135   151   Psort
          uncharacterized
                                            Transmembrane     180   196   Psort
                                            Transmembrane     212   228   Psort
                                            Transmembrane     239   255   Psort

FN0716    possible phophatidylinositol-4-   Cleavable N-term  1     21    Psort
          phosphate 5-kinase                signal seq

FN0718    Fusobacterium-specific protein,   May be a                      Psort
          uncharacterized                   lipotein (signal

FN0721    conserved hypothetical protein    Cleavable N-term  1     21    Psort
                                            signal seq

FN0722    conserved hypothetical protein    Transmembrane     230   246   Psort
          (predicted WD-repeat family
          protein)

FN0723    Fusobacterium-specific protein,   Uncleavable N-    1     37    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     16    32    Psort
                                            Transmembrane     46    62    Psort
                                            Transmembrane     75    91    Psort

FN0725    molybdopterin and thiamine        Transmembrane     23    39    Psort
          biosynthesis dinucleotide-
          utilizing enzyme
                                            Transmembrane     212   228   Psort

FN0727    hypothetical protein              Uncleavable N-    1     59    Psort
                                            term signal seq

FN0730    phosphoglycerate mutase           Uncleavable N-    1     17    Psort
                                            term signal seq
                                            Transmembrane     5     21    Psort

FN0731    Fusobacterium-specific protein,   Cleavable N-term  1     18    Psort
          uncharacterized                   signal seq

FN0735    outer membrane protein            Transmembrane     20    36    Psort

FN0738    possible phosphatidylinositol-4-  Cleavable N-term  1     22    Psort
          phosphate 5-kinase                signal seq
                                            Transmembrane     223   239   Psort

FN0739    formiminotransferase              Transmembrane     126   142   Psort
          cyclodeaminase; methenyl
          tetrahydrofolate cyclohydrolase
                                            Transmembrane     152   168   Psort

FN0744    Fusobacterium-specific protein,   Uncleavable N-    1     57    Psort
          possible metal-dependent          term signal seq
          phosphohydrolase
                                            Transmembrane     38    54    Psort

FN0745    possible metal-dependent          Transmembrane     213   229   Psort
          phosphohydrolase, HD domain
                                            Transmembrane     250   266   Psort
                                            Transmembrane     270   286   Psort
                                            Transmembrane     290   306   Psort
                                            Transmembrane     343   359   Psort
                                            Transmembrane     372   388   Psort

FN0748    conserved hypothetical protein    Uncleavable N-    1     13    Psort
          (possible metal-binding protein)  term signal seq
                                            Transmembrane     18    34    Psort
                                            Transmembrane     44    60    Psort
                                            Transmembrane     67    83    Psort
                                            Transmembrane     113   129   Psort
                                            Transmembrane     142   158   Psort
                                            Transmembrane     173   189   Psort
                                            Transmembrane     212   228   Psort
                                            Transmembrane     259   275   Psort
                                            Transmembrane     301   317   Psort
                                            Transmembrane     322   338   Psort
                                            Transmembrane     341   357   Psort
                                            Transmembrane     375   391   Psort

FN0750    Fusobacterium-specific protein,   Uncleavable N-    1     18    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     4     20    Psort

FN0760    Fusobacterium-specific protein,   Uncleavable N-    1     19    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     7     23    Psort
                                            Transmembrane     44    60    Psort
                                            Transmembrane     73    89    Psort
                                            Transmembrane     148   164   Psort

FN0761    transcriptional regulator, Bvg    Transmembrane     58    74    Psort
          accessory factor

FN0763    Fusobacterium-specific protein,   Uncleavable N-    1     53    Psort
          predicted transporter (LysE       term signal seq
          family)
                                            Transmembrane     8     24    Psort

FN0764    Fusobacterium-specific protein,   Uncleavable N-    1     35    Psort
          predicted transporter (LysE       term signal seq
          family)
                                            Transmembrane     17    33    Psort
                                            Transmembrane     61    77    Psort
                                            Transmembrane     125   141   Psort

FN0766    large-conductance                 Transmembrane     27    43    Psort
          mechanosensitive channel
                                            Transmembrane     49    65    Psort
                                            Transmembrane     88    104   Psort

FN0768    hemin uptake system outer         Uncleavable N-    1     14    Psort
          membrane receptor                 term signal seq

FN0769    iron(III) dicitrate ABC           Cleavable N-term  1     18    Psort
          transport system, permease        signal seq
          protein
                                            Transmembrane     20    36    Psort
                                            Transmembrane     55    71    Psort
                                            Transmembrane     85    101   Psort
                                            Transmembrane     111   127   Psort
                                            Transmembrane     138   154   Psort
                                            Transmembrane     184   200   Psort
                                            Transmembrane     227   243   Psort
                                            Transmembrane     246   262   Psort
                                            Transmembrane     269   285   Psort
                                            Transmembrane     290   306   Psort

FN0770    iron (III) ABC transporter, ATP-  Transmembrane     192   208   Psort
          binding protein

FN0779    GTPase                            Uncleavable N-    1     13    Psort
                                            term signal seq

FN0780    conserved hypothetical protein    Uncleavable N-    1     53    Psort
          (possible membrane spanning       term signal seq
          protein)
                                            Transmembrane     6     22    Psort
                                            Transmembrane     54    70    Psort
                                            Transmembrane     118   134   Psort

FN0781    conserved hypothetical protein    Transmembrane     123   139   Psort
          (possible integral membrane
          protein)
                                            Transmembrane     142   158   Psort
                                            Transmembrane     170   186   Psort
                                            Transmembrane     201   217   Psort
                                            Transmembrane     237   253   Psort

FN0789    conserved hypothetical protein    Uncleavable N-    1     18    Psort
          (possible transporter)            term signal seq
                                            Transmembrane     14    30    Psort
                                            Transmembrane     58    74    Psort
                                            Transmembrane     79    95    Psort
                                            Transmembrane     109   125   Psort
                                            Transmembrane     152   168   Psort
                                            Transmembrane     171   187   Psort

FN0793    sodium/glutamate symport carrier  Uncleavable N-    1     61    Psort
          protein (glutamate permease)      term signal seq
                                            Transmembrane     6     22    Psort
                                            Transmembrane     37    53    Psort
                                            Transmembrane     73    89    Psort
                                            Transmembrane     93    109   Psort
                                            Transmembrane     160   176   Psort
                                            Transmembrane     219   235   Psort
                                            Transmembrane     240   256   Psort
                                            Transmembrane     272   288   Psort
                                            Transmembrane     299   315   Psort
                                            Transmembrane     367   383   Psort

FN0799    glycogen operon                   Transmembrane     474   490   Psort
          protein/isoamylase

FN0800    glutamine ABC transporter,        Uncleavable N-    1     22    Psort
          glutamine-binding periplasmic     term signal seq
          protein
                                            Transmembrane     3     19    Psort

FN0802    glutamine ABC transporter,        Transmembrane     32    48    Psort
          substrate binding and permease
          protein
                                            Transmembrane     84    100   Psort
                                            Transmembrane     105   121   Psort
                                            Transmembrane     207   223   Psort

FN0804    cytochrome c-type biogenesis      Uncleavable N-    1     23    Psort
          protein CcdA                      term signal seq
                                            Transmembrane     19    35    Psort
                                            Transmembrane     47    63    Psort
                                            Transmembrane     78    94    Psort
                                            Transmembrane     127   143   Psort
                                            Transmembrane     154   170   Psort
                                            Transmembrane     198   214   Psort

FN0810    low specificity L-threonine       Transmembrane     198   214   Psort
          aldolase

FN0813    predicted transcriptional         Transmembrane     330   346   Psort
          regulator, TetR family

FN0815    possible proprionate (GntP        May be a                      Psort
          family) permease                  lipotein (signal
                                            Transmembrane     93    109   Psort
                                            Transmembrane     167   183   Psort
                                            Transmembrane     224   240   Psort
                                            Transmembrane     266   282   Psort
                                            Transmembrane     317   333   Psort
                                            Transmembrane     425   441   Psort

FN0821    Fusobacterium-specific protein,   Uncleavable N-    1     13    Psort
          uncharacterized                   term signal seq

FN0822    shikimate kinase                  Uncleavable N-    1     19    Psort
                                            term signal seq

FN0823    GTP-binding protein (hflX)        Transmembrane     104   120   Psort

FN0826    efflux membrane fusion protein    Transmembrane     286   302   Psort

FN0828    ABC transporter, ATP-binding      Transmembrane     22    38    Psort
          component and permease protein
                                            Transmembrane     294   310   Psort
                                            Transmembrane     338   354   Psort
                                            Transmembrane     356   372   Psort
                                            Transmembrane     374   390   Psort

FN0829    Fusobacterium-specific protein,   Uncleavable N-    1     18    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     4     20    Psort

FN0831    hemin uptake system, outer        Cleavable N-term  1     18    Psort
          membrane receptor                 signal seq

FN0833    Fusobacterium-specific protein,   Uncleavable N-    1     18    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     4     20    Psort

FN0834    Fusobacterium-specific protein,   Uncleavable N-    1     18    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     4     20    Psort

FN0839    hypothetical protein              Transmembrane     31    47    Psort

FN0842    hypothetical protein              Transmembrane     30    46    Psort
                                            Transmembrane     53    69    Psort

FN0844    hypothetical protein              Uncleavable N-    1     13    Psort
                                            term signal seq
                                            Transmembrane     4     20    Psort
                                            Transmembrane     33    49    Psort

FN0847    conserved hypothetical protein    Transmembrane     493   509   Psort
          (TPR-repeat protein)

FN0852    alpha/beta superfamily hydrolase  Transmembrane     61    77    Psort

FN0855    glucose-1-phosphate               Uncleavable N-    1     36    Psort
          adenylyltransferase               term signal seq

FN0858    4-alpha-glucanotransferase        Uncleavable N-    1     19    Psort
                                            term signal seq

FN0859    hypothetical protein              Uncleavable N-    1     21    Psort
                                            term signal seq
                                            Transmembrane     4     20    Psort

FN0861    hypothetical protein              Uncleavable N-    1     47    Psort
                                            term signal seq

FN0862    hypothetical protein              Uncleavable N-    1     17    Psort
                                            term signal seq
                                            Transmembrane     4     20    Psort
                                            Transmembrane     36    52    Psort

FN0864    hypothetical protein              Uncleavable N-    1     58    Psort
                                            term signal seq
                                            Transmembrane     2     18    Psort
                                            Transmembrane     34    50    Psort

FN0866    probable integral membrane        Cleavable N-term  1     32    Psort
          protein                           signal seq
                                            Transmembrane     51    67    Psort
                                            Transmembrane     77    93    Psort
                                            Transmembrane     102   118   Psort
                                            Transmembrane     134   150   Psort
                                            Transmembrane     158   174   Psort
                                            Transmembrane     198   214   Psort

FN0867    long-chain-fatty-acid CoA ligase  Transmembrane     197   213   Psort

FN0873    protease IV                       Transmembrane     318   334   Psort

FN0876    gamma-glutamyltranspeptidase      Transmembrane     45    61    Psort

FN0877    sodium/proline symporter          Cleavable N-term  1     56    Psort
                                            signal seq
                                            Transmembrane     72    88    Psort
                                            Transmembrane     146   162   Psort
                                            Transmembrane     174   190   Psort
                                            Transmembrane     258   274   Psort
                                            Transmembrane     299   315   Psort
                                            Transmembrane     350   366   Psort
                                            Transmembrane     405   421   Psort
                                            Transmembrane     430   446   Psort

FN0879    ABC-type multidrug transport      Uncleavable N-    1     34    Psort
          system, permease component        term signal seq
                                            Transmembrane     23    39    Psort
                                            Transmembrane     49    65    Psort
                                            Transmembrane     109   125   Psort
                                            Transmembrane     136   152   Psort
                                            Transmembrane     188   204   Psort
                                            Transmembrane     231   247   Psort

FN0881    conserved hypothetical protein    Transmembrane     34    50    Psort
          (possible ABC transporter
          permease protein)
                                            Transmembrane     139   155   Psort
                                            Transmembrane     156   172   Psort
                                            Transmembrane     205   221   Psort
                                            Transmembrane     229   245   Psort

FN0884    iron(III) ABC transporter,        Cleavable N-term  1     26    Psort
          permease protein                  signal seq
                                            Transmembrane     73    89    Psort
                                            Transmembrane     114   130   Psort
                                            Transmembrane     131   147   Psort
                                            Transmembrane     162   178   Psort
                                            Transmembrane     203   219   Psort
                                            Transmembrane     258   274   Psort
                                            Transmembrane     289   305   Psort
                                            Transmembrane     319   335   Psort

FN0885    iron (III) ABC transporter,       Cleavable N-term  1     26    Psort
          periplasmic-binding protein       signal seq

FN0886    hemin uptake system, outer        Cleavable N-term  1     18    Psort
          membrane receptor                 signal seq

FN0888    uracil permease                   Uncleavable N-    1     55    Psort
                                            term signal seq
                                            Transmembrane     17    33    Psort
                                            Transmembrane     37    53    Psort
                                            Transmembrane     59    75    Psort
                                            Transmembrane     86    102   Psort
                                            Transmembrane     111   127   Psort
                                            Transmembrane     149   165   Psort
                                            Transmembrane     172   188   Psort
                                            Transmembrane     220   236   Psort
                                            Transmembrane     300   316   Psort
                                            Transmembrane     329   345   Psort
                                            Transmembrane     362   378   Psort
                                            Transmembrane     383   399   Psort

FN0891    possible membrane nuclease        Cleavable N-term  1     24    Psort
          A/DHP2 precursor                  signal seq

FN0894    Fusobacterium-specific protein,   Transmembrane     31    47    Psort
          uncharacterized
                                            Transmembrane     55    71    Psort

FN0896    hypothetical protein              Transmembrane     24    40    Psort

FN0901    possible DNA polymerase,          Transmembrane     107   123   Psort
          bacteriophage-type

FN0903    polysialic acid capsule           Transmembrane     106   122   Psort
          expression protein

FN0904    NAD(FAD)-utilizing dehydrogenase  Uncleavable N-    1     13    Psort
                                            term signal seq

FN0905    Fusobacterium-specific protein,   Uncleavable N-    1     16    Psort
          uncharacterized                   term signal seq

FN0906    glycerol-3-phosphate              Uncleavable N-    1     17    Psort
          dehydrogenase (NAD(P)+)           term signal seq
                                            Transmembrane     4     20    Psort

FN0910    nicotinate-nucleotide--           Transmembrane     239   255   Psort
          dimethylbenzimidazole
          phosphoribosyltransferase
                                            Transmembrane     263   279   Psort
                                            Transmembrane     323   339   Psort

FN0911    alpha-ribazole-5'-phosphate       Transmembrane     142   158   Psort
          phosphatase

FN0912    cobalamin-5-phosphate synthase    Uncleavable N-    1     14    Psort
                                            term signal seq
                                            Transmembrane     35    51    Psort
                                            Transmembrane     62    78    Psort
                                            Transmembrane     118   134   Psort
                                            Transmembrane     185   201   Psort
                                            Transmembrane     221   237   Psort
                                            Transmembrane     263   279   Psort

FN0914    conserved hypothetical protein    Cleavable N-term  1     22    Psort
                                            signal seq

FN0916    Fusobacterium-specific protein,   May be a                      Psort
          possible exported protein         lipotein (signal

FN0918    hypothetical protein              Transmembrane     39    55    Psort
                                            Transmembrane     62    78    Psort

FN0920    heat-shock protein (htpX);        Transmembrane     26    42    Psort
          possible protease
                                            Transmembrane     51    67    Psort
                                            Transmembrane     173   189   Psort

FN0921    Fusobacterium-specific protein,   Uncleavable N-    1     40    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     3     19    Psort
                                            Transmembrane     28    44    Psort
                                            Transmembrane     63    79    Psort

FN0922    homoserine kinase                 Transmembrane     215   231   Psort

FN0923    cardiolipin synthase              Cleavable N-term  1     21    Psort
                                            signal seq
                                            Transmembrane     42    58    Psort

FN0927    Fusobacterium-specific protein,   Transmembrane     33    49    Psort
          uncharacterized
                                            Transmembrane     59    75    Psort
                                            Transmembrane     141   157   Psort
                                            Transmembrane     167   183   Psort

FN0931    phosphohydrolase (mutT family     Uncleavable N-    1     19    Psort
          protein)                          term signal seq
                                            Transmembrane     84    100   Psort

FN0932    Fusobacterium-specific protein,   Transmembrane     38    54    Psort
          uncharacterized
                                            Transmembrane     66    82    Psort
                                            Transmembrane     139   155   Psort

FN0934    chorismate synthase               Transmembrane     129   145   Psort
                                            Transmembrane     287   303   Psort
                                            Transmembrane     336   352   Psort

FN0935    conserved hypothetical protein    Transmembrane     95    111   Psort
                                            Transmembrane     294   310   Psort

FN0936    capsular polyglutamate            Uncleavable N-    1     36    Psort
          biosynthesis (capC protein)       term signal seq
                                            Transmembrane     4     20    Psort
                                            Transmembrane     43    59    Psort
                                            Transmembrane     72    88    Psort
                                            Transmembrane     99    115   Psort
                                            Transmembrane     132   148   Psort

FN0937    capsular polyglutamate            Uncleavable N-    1     57    Psort
          biosynthesis (capB protein)       term signal seq
                                            Transmembrane     2     18    Psort

FN0939    predicted membrane-spanning       Cleavable N-term  1     16    Psort
          protein                           signal seq
                                            Transmembrane     19    35    Psort
                                            Transmembrane     58    74    Psort
                                            Transmembrane     97    113   Psort
                                            Transmembrane     120   136   Psort
                                            Transmembrane     142   158   Psort
                                            Transmembrane     180   196   Psort
                                            Transmembrane     221   237   Psort
                                            Transmembrane     247   263   Psort
                                            Transmembrane     283   299   Psort
                                            Transmembrane     316   332   Psort
                                            Transmembrane     335   351   Psort
                                            Transmembrane     398   414   Psort

FN0940    hypothetical protein              Cleavable N-term  1     19    Psort
                                            signal seq

FN0941    gamma-glutamyltranspeptidase      Uncleavable N-    1     21    Psort
                                            term signal seq
                                            Transmembrane     5     21    Psort

FN0942    sensor histidine kinase           Uncleavable N-    1     40    Psort
                                            term signal seq
                                            Transmembrane     17    33    Psort
                                            Transmembrane     72    88    Psort
                                            Transmembrane     95    111   Psort
                                            Transmembrane     145   161   Psort
                                            Transmembrane     203   219   Psort

FN0944    Na+ driven multidrug efflux pump  Transmembrane     24    40    Psort
                                            Transmembrane     60    76    Psort
                                            Transmembrane     104   120   Psort
                                            Transmembrane     145   161   Psort
                                            Transmembrane     172   188   Psort
                                            Transmembrane     202   218   Psort
                                            Transmembrane     286   302   Psort
                                            Transmembrane     327   343   Psort
                                            Transmembrane     371   387   Psort
                                            Transmembrane     407   423   Psort
                                            Transmembrane     429   445   Psort

FN0945    dual specificity phosphatase;     Uncleavable N-    1     61    Psort
          serine/threonine specific         term signal seq
                                            Transmembrane     7     23    Psort
                                            Transmembrane     52    68    Psort
                                            Transmembrane     84    100   Psort
                                            Transmembrane     157   173   Psort
                                            Transmembrane     178   194   Psort

FN0947    conserved hypothetical protein    Cleavable N-term  1     21    Psort
                                            signal seq

FN0948    cobalt-zinc-cadmium resistance    Uncleavable N-    1     54    Psort
          protein                           term signal seq
                                            Transmembrane     18    34    Psort
                                            Transmembrane     87    103   Psort
                                            Transmembrane     120   136   Psort
                                            Transmembrane     162   178   Psort
                                            Transmembrane     186   202   Psort

FN0949    superfamily I DNA helicase        Transmembrane     1013  1029  Psort

FN0951    precorrin-3B C17-                 Transmembrane     107   123   Psort
          methyltransferase

FN0952    cobalamin biosynthesis protein    Transmembrane     66    82    Psort

FN0958    hypothetical protein              Cleavable N-term  1     18    Psort
                                            signal seq

FN0960    Fusobacterium-specific protein,   Uncleavable N-    1     18    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     3     19    Psort

FN0961    Fusobacterium-specific protein,   Transmembrane     114   130   Psort
          uncharacterized

FN0963    Fusobacterium-specific protein,   Transmembrane     113   129   Psort
          uncharacterized

FN0967    cobalamin biosynthesis protein    Transmembrane     235   251   Psort

FN0971    Huntington interacting protein E  Transmembrane     237   253   Psort
          (HYPE)

FN0972    cobyrinic acid a,c-diamide        Transmembrane     101   117   Psort
          synthase

FN0974    possible glyoxalase family        Uncleavable N-    1     17    Psort
          protein; glyoxalase/bleomycin     term signal seq
          resistance

FN0975    cobalamin biosynthesis protein    Uncleavable N-    1     46    Psort
                                            term signal seq
                                            Transmembrane     4     20    Psort
                                            Transmembrane     55    71    Psort
                                            Transmembrane     146   162   Psort
                                            Transmembrane     215   231   Psort
                                            Transmembrane     308   324   Psort

FN0978    Na+/H+ antiporter (NhaC)          Cleavable N-term  1     27    Psort
                                            signal seq
                                            Transmembrane     57    73    Psort
                                            Transmembrane     98    114   Psort
                                            Transmembrane     121   137   Psort
                                            Transmembrane     185   201   Psort
                                            Transmembrane     222   238   Psort
                                            Transmembrane     246   262   Psort
                                            Transmembrane     290   306   Psort
                                            Transmembrane     335   351   Psort
                                            Transmembrane     380   396   Psort
                                            Transmembrane     403   419   Psort

FN0980    hypothetical protein              Uncleavable N-    1     24    Psort
                                            term signal seq
                                            Transmembrane     10    26    Psort
                                            Transmembrane     58    74    Psort

FN0981    phosphoribosylamine--glycine      Transmembrane     140   156   Psort
          ligase
                                            Transmembrane     265   281   Psort

FN0982    phosphoribosylaminoimidazolecarb  Transmembrane     394   410   Psort
          oxamide formyltransferase; IMP
          cyclohydrolase

FN0985    phosphoribosylglycinamide         Uncleavable N-    1     13    Psort
          formyltransferase                 term signal seq
                                            Transmembrane     70    86    Psort

FN0989    phosphoribosylaminoimidazole      Transmembrane     58    74    Psort
          carboxylase, catalytic subunit

FN0990    phosphoribosylformylglycinamidin  Transmembrane     723   739   Psort
          e synthase
                                            Transmembrane     863   879   Psort

FN0991    CDP-diacylglycerol--serine O-     Transmembrane     32    48    Psort
          phosphatidyltransferase
                                            Transmembrane     97    113   Psort
                                            Transmembrane     136   152   Psort
                                            Transmembrane     163   179   Psort
                                            Transmembrane     195   211   Psort
                                            Transmembrane     215   231   Psort

FN0993    trk system potassium uptake       Uncleavable N-    1     28    Psort
          protein (trkH)                    term signal seq
                                            Transmembrane     13    29    Psort
                                            Transmembrane     39    55    Psort
                                            Transmembrane     71    87    Psort
                                            Transmembrane     134   150   Psort
                                            Transmembrane     186   202   Psort
                                            Transmembrane     243   259   Psort
                                            Transmembrane     277   293   Psort
                                            Transmembrane     332   348   Psort
                                            Transmembrane     397   413   Psort
                                            Transmembrane     458   474   Psort

FN0994    hypothetical protein              Cleavable N-term  1     14    Psort
                                            signal seq
                                            Transmembrane     35    51    Psort

FN0995    hypothetical protein              Cleavable N-term  1     61    Psort
                                            signal seq
                                            Transmembrane     108   124   Psort
                                            Transmembrane     168   184   Psort

FN0996    predicted transport membrane-     Transmembrane     13    29    Psort
          spanning protein
                                            Transmembrane     37    53    Psort
                                            Transmembrane     72    88    Psort
                                            Transmembrane     92    108   Psort
                                            Transmembrane     125   141   Psort
                                            Transmembrane     153   169   Psort
                                            Transmembrane     200   216   Psort

FN0998    oligopeptide ABC transporter,     May be a                      Psort
          substrate-binding protein         lipotein (signal

FN1001    dethiobiotin synthetase           Transmembrane     136   152   Psort

FN1004    transcriptional regulator, TetR   Transmembrane     139   155   Psort
          family

FN1007    hypothetical protein              Uncleavable N-    1     44    Psort
                                            term signal seq
                                            Transmembrane     16    32    Psort
                                            Transmembrane     50    66    Psort
                                            Transmembrane     109   125   Psort
                                            Transmembrane     149   165   Psort

FN1008    Fusobacterium-specific protein,   Uncleavable N-    1     26    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     12    28    Psort
                                            Transmembrane     163   179   Psort

FN1012    HPr Ser/Thr protein               Transmembrane     464   480   Psort
          kinase/phosphatase

FN1013    Fusobacterium-specific protein,   Transmembrane     30    46    Psort
          uncharacterized

FN1015    5'-methylthioadenosine/S-         Transmembrane     183   199   Psort
          adenosylhomocysteine nuclosidase

FN1017    Fusobacterium-specific protein,   May be a                      Psort
          uncharacterized                   lipotein (signal

FN1018    hypothetical protein              Uncleavable N-    1     50    Psort
                                            term signal seq
                                            Transmembrane     8     24    Psort
                                            Transmembrane     27    43    Psort

FN1019    3-hydroxybutyryl-CoA              Cleavable N-term  1     20    Psort
          dehydrogenase                     signal seq
                                            Transmembrane     226   242   Psort

FN1020    3-hydroxybutyryl-CoA              Transmembrane     90    106   Psort
          dehydratase/crotonase

FN1022    calcium-transporting ATPase       Transmembrane     58    74    Psort
                                            Transmembrane     78    94    Psort
                                            Transmembrane     244   260   Psort
                                            Transmembrane     265   281   Psort
                                            Transmembrane     677   693   Psort
                                            Transmembrane     744   760   Psort
                                            Transmembrane     806   822   Psort
                                            Transmembrane     839   855   Psort

FN1025    xanthine/uracil permease family   Transmembrane     26    42    Psort
          protein
                                            Transmembrane     56    72    Psort
                                            Transmembrane     107   123   Psort
                                            Transmembrane     146   162   Psort
                                            Transmembrane     177   193   Psort
                                            Transmembrane     198   214   Psort
                                            Transmembrane     239   255   Psort
                                            Transmembrane     331   347   Psort
                                            Transmembrane     354   370   Psort
                                            Transmembrane     397   413   Psort
                                            Transmembrane     420   436   Psort

FN1027    rod shape-determining protein     Cleavable N-term  1     31    Psort
                                            signal seq
                                            Transmembrane     48    64    Psort
                                            Transmembrane     75    91    Psort
                                            Transmembrane     140   156   Psort
                                            Transmembrane     160   176   Psort
                                            Transmembrane     183   199   Psort
                                            Transmembrane     279   295   Psort
                                            Transmembrane     313   329   Psort
                                            Transmembrane     345   361   Psort

FN1030    conserved hypothetical protein    Uncleavable N-    1     33    Psort
          (predicted membrane permease)     term signal seq
                                            Transmembrane     14    30    Psort
                                            Transmembrane     66    82    Psort
                                            Transmembrane     100   116   Psort
                                            Transmembrane     282   298   Psort
                                            Transmembrane     311   327   Psort
                                            Transmembrane     340   356   Psort

FN1031    conserved hypothetical protein    Uncleavable N-    1     36    Psort
          (predicted membrane-spanning      term signal seq
          protein)
                                            Transmembrane     16    32    Psort
                                            Transmembrane     39    55    Psort
                                            Transmembrane     60    76    Psort
                                            Transmembrane     99    115   Psort
                                            Transmembrane     275   291   Psort
                                            Transmembrane     304   320   Psort

FN1032    Fusobacterium-specific protein,   Uncleavable N-    1     17    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     3     19    Psort
                                            Transmembrane     23    39    Psort
                                            Transmembrane     67    83    Psort
                                            Transmembrane     103   119   Psort

FN1034    transcriptional regulator,        Transmembrane     161   177   Psort
          AcrR/TetR family

FN1036    conserved hypothetical protein    Transmembrane     60    76    Psort
          (possible multimeric flavodoxin)

FN1038    permease; possible                Cleavable N-term  1     25    Psort
          drug/metabolite transporter       signal seq
          (DMT) family
                                            Transmembrane     41    57    Psort
                                            Transmembrane     66    82    Psort
                                            Transmembrane     102   118   Psort
                                            Transmembrane     124   140   Psort
                                            Transmembrane     155   171   Psort
                                            Transmembrane     185   201   Psort
                                            Transmembrane     244   260   Psort
                                            Transmembrane     274   290   Psort

FN1039    branched-chain amino acid         Transmembrane     29    45    Psort
          transport protein (possible
          permease)
                                            Transmembrane     60    76    Psort
                                            Transmembrane     177   193   Psort
                                            Transmembrane     213   229   Psort

FN1040    probable branched-chain amino     Uncleavable N-    1     60    Psort
          acid transport protein            term signal seq
                                            Transmembrane     8     24    Psort
                                            Transmembrane     45    61    Psort
                                            Transmembrane     88    104   Psort

FN1041    conserved hypothetical protein    Transmembrane     346   362   Psort
          (predicted acetyltransferase)

FN1042    S1 RNA binding domain protein     Cleavable N-term  1     24    Psort
                                            signal seq

FN1044    conserved hypothetical protein    Transmembrane     2     18    Psort
                                            Transmembrane     34    50    Psort
                                            Transmembrane     57    73    Psort
                                            Transmembrane     89    105   Psort
                                            Transmembrane     132   148   Psort
                                            Transmembrane     182   198   Psort
                                            Transmembrane     221   237   Psort

FN1045    conserved hypothetical protein    Transmembrane     159   175   Psort

FN1046    Fusobacterium-specific protein,   Transmembrane     19    35    Psort
          uncharacterized
                                            Transmembrane     48    64    Psort
                                            Transmembrane     181   197   Psort
                                            Transmembrane     226   242   Psort

FN1047    Fusobacterium-specific protein,   Cleavable N-term  1     28    Psort
          predicted membrane-spanning       signal seq
          protein
                                            Transmembrane     50    66    Psort
                                            Transmembrane     95    111   Psort
                                            Transmembrane     119   135   Psort

FN1048    Fusobacterium-specific protein,   Transmembrane     137   153   Psort
          predicted membrane-spanning
          protein
                                            Transmembrane     167   183   Psort
                                            Transmembrane     223   239   Psort

FN1051    Fusobacterium-specific protein,   Uncleavable N-    1     34    Psort
          predicted membrane-spanning       term signal seq
          protein
                                            Transmembrane     21    37    Psort
                                            Transmembrane     50    66    Psort
                                            Transmembrane     101   117   Psort
                                            Transmembrane     126   142   Psort

FN1052    Fusobacterium-specific protein,   Uncleavable N-    1     13    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     4     20    Psort

FN1053    Fusobacterium-specific protein,   Uncleavable N-    1     29    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     16    32    Psort

FN1054    hypothetical protein              Uncleavable N-    1     13    Psort
                                            term signal seq
                                            Transmembrane     10    26    Psort

FN1055    cysteine synthase                 Transmembrane     78    94    Psort

FN1056    Fusobacterium-specific protein,   Uncleavable N-    1     26    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     15    31    Psort
                                            Transmembrane     60    76    Psort

FN1058    hypothetical protein              Cleavable N-term  1     23    Psort
                                            signal seq
                                            Transmembrane     66    82    Psort
                                            Transmembrane     115   131   Psort

FN1059    branched-chain amino acid         Cleavable N-term  1     16    Psort
          transport system carrier protein  signal seq
                                            Transmembrane     42    58    Psort
                                            Transmembrane     81    97    Psort
                                            Transmembrane     121   137   Psort
                                            Transmembrane     151   167   Psort
                                            Transmembrane     227   243   Psort
                                            Transmembrane     276   292   Psort
                                            Transmembrane     310   326   Psort
                                            Transmembrane     334   350   Psort
                                            Transmembrane     366   382   Psort
                                            Transmembrane     403   419   Psort

FN1061    hypothetical protein              Uncleavable N-    1     20    Psort
                                            term signal seq
                                            Transmembrane     5     21    Psort
                                            Transmembrane     63    79    Psort
                                            Transmembrane     106   122   Psort
                                            Transmembrane     156   172   Psort

FN1064    conserved hypothetical protein    Cleavable N-term  1     44    Psort
                                            signal seq
                                            Transmembrane     64    80    Psort
                                            Transmembrane     101   117   Psort
                                            Transmembrane     154   170   Psort

FN1065    conserved hypothetical protein    Uncleavable N-    1     33    Psort
                                            term signal seq
                                            Transmembrane     16    32    Psort
                                            Transmembrane     40    56    Psort
                                            Transmembrane     104   120   Psort

FN1070    glucose inhibited division        Uncleavable N-    1     17    Psort
          protein A                         term signal seq

FN1072    GTP-binding protein               Transmembrane     64    80    Psort

FN1073    Fusobacterium-specific protein,   Transmembrane     25    41    Psort
          uncharacterized

FN1075    conserved hypothetical protein    Transmembrane     69    85    Psort
          (possible lipase)

FN1076    Fusobacterium-specific protein,   Uncleavable N-    1     41    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     14    30    Psort
                                            Transmembrane     46    62    Psort
                                            Transmembrane     101   117   Psort
                                            Transmembrane     131   147   Psort
                                            Transmembrane     256   272   Psort
                                            Transmembrane     275   291   Psort

FN1080    ABC transporter, ATP-binding /    Uncleavable N-    1     22    Psort
          permease                          term signal seq
                                            Transmembrane     16    32    Psort
                                            Transmembrane     50    66    Psort
                                            Transmembrane     140   156   Psort
                                            Transmembrane     158   174   Psort
                                            Transmembrane     247   263   Psort
                                            Transmembrane     268   284   Psort

FN1082    Fusobacterium-specific protein,   Uncleavable N-    1     14    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     2     18    Psort
                                            Transmembrane     68    84    Psort

FN1083    probable membrane protein         Uncleavable N-    1     46    Psort
                                            term signal seq
                                            Transmembrane     2     18    Psort
                                            Transmembrane     26    42    Psort
                                            Transmembrane     68    84    Psort
                                            Transmembrane     118   134   Psort
                                            Transmembrane     179   195   Psort

FN1086    conserved hypothetical protein    Transmembrane     214   230   Psort
          (possible transporter/abortive
          phage resistance protein)

FN1088    NADH oxidase, water-forming       Transmembrane     141   157   Psort
          (nox)

FN1089    conserved hypothetical protein    Uncleavable N-    1     20    Psort
          (predicted ATP-binding protein;   term signal seq
          P-loop)

FN1092    conserved hypothetical protein    Transmembrane     56    72    Psort
          (possible membrane-spanning
          protein)
                                            Transmembrane     99    115   Psort
                                            Transmembrane     133   149   Psort
                                            Transmembrane     194   210   Psort
                                            Transmembrane     225   241   Psort

FN1094    glycosyl transferase, possible    Uncleavable N-    1     41    Psort
          group 2 protein                   term signal seq
                                            Transmembrane     245   261   Psort
                                            Transmembrane     264   280   Psort
                                            Transmembrane     309   325   Psort
                                            Transmembrane     335   351   Psort

FN1095    hypothetical protein              Uncleavable N-    1     32    Psort
                                            term signal seq
                                            Transmembrane     8     24    Psort

FN1096    hypothetical protein              Transmembrane     243   259   Psort

FN1097    probable ATPase involved in DNA   Transmembrane     418   434   Psort
          repair
                                            Transmembrane     447   463   Psort
                                            Transmembrane     481   497   Psort

FN1104    holliday junction DNA helicase    Transmembrane     73    89    Psort
          (ruvA)

FN1107    acetyltransferase (GNAT family)   Uncleavable N-    1     54    Psort
                                            term signal seq

FN1108    predicted phosphohydrolase        Uncleavable N-    1     13    Psort
          (MUTT/NUDIX family protein)       term signal seq

FN1111    oligopeptide ABC transporter,     Transmembrane     23    39    Psort
          periplasmic-binding protein

FN1112    dipeptide ABC transporter,        Uncleavable N-    1     26    Psort
          permease protein                  term signal seq
                                            Transmembrane     10    26    Psort
                                            Transmembrane     75    91    Psort
                                            Transmembrane     94    110   Psort
                                            Transmembrane     113   129   Psort
                                            Transmembrane     239   255   Psort

FN1113    nickel ABC transporter, permease  Cleavable N-term  1     32    Psort
          protein                           signal seq
                                            Transmembrane     108   124   Psort
                                            Transmembrane     152   168   Psort
                                            Transmembrane     176   192   Psort
                                            Transmembrane     231   247   Psort
                                            Transmembrane     281   297   Psort

FN1114    conserved hypothetical protein    Uncleavable N-    1     34    Psort
                                            term signal seq
                                            Transmembrane     16    32    Psort

FN1115    conserved hypothetical protein    Transmembrane     34    50    Psort
          (predicted membrane-spanning
          protein)
                                            Transmembrane     77    93    Psort
                                            Transmembrane     118   134   Psort
                                            Transmembrane     156   172   Psort
                                            Transmembrane     187   203   Psort
                                            Transmembrane     225   241   Psort

FN1118    conserved hypothetical protein    Transmembrane     31    47    Psort
          (possible ribosomal protein)

FN1120    phosphoenolpyruvate               Transmembrane     338   354   Psort
          carboxykinase (ATP)

FN1122    long-chain-fatty-acid--CoA        Transmembrane     199   215   Psort
          ligase
                                            Transmembrane     627   643   Psort

FN1125    lemA family protein               Uncleavable N-    1     15    Psort
                                            term signal seq
                                            Transmembrane     2     18    Psort

FN1127    predicted membrane-spanning       Cleavable N-term  1     20    Psort
          protein                           signal seq
                                            Transmembrane     269   285   Psort
                                            Transmembrane     423   439   Psort
                                            Transmembrane     448   464   Psort

FN1129    chromosome segregation SMC        Transmembrane     523   539   Psort
          protein
                                            Transmembrane     622   638   Psort

FN1135    phosphonate ABC transporter,      Uncleavable N-    1     30    Psort
          phosphate-binding protein         term signal seq

FN1137    phosphonate ABC transporter,      Uncleavable N-    1     33    Psort
          permease protein                  term signal seq
                                            Transmembrane     18    34    Psort
                                            Transmembrane     72    88    Psort
                                            Transmembrane     116   132   Psort
                                            Transmembrane     136   152   Psort
                                            Transmembrane     232   248   Psort
                                            Transmembrane     277   293   Psort
                                            Transmembrane     336   352   Psort
                                            Transmembrane     382   398   Psort
                                            Transmembrane     495   511   Psort

FN1140    possible activator of (R)-2-      Uncleavable N-    1     21    Psort
          hydroxyglutaryl-CoA dehydratase   term signal seq
                                            Transmembrane     7     23    Psort

FN1141    formate transporter               Transmembrane     27    43    Psort
                                            Transmembrane     65    81    Psort
                                            Transmembrane     110   126   Psort
                                            Transmembrane     157   173   Psort
                                            Transmembrane     182   198   Psort

FN1144    Fusobacterium-specific protein,   May be a                      Psort
          uncharacterized                   lipotein (signal

FN1147    conserved hypothetical protein    Transmembrane     301   317   Psort

FN1148    sodium:dicarboxylate symporter;   Uncleavable N-    1     57    Psort
          possible serine/threonine sodium  term signal seq
          symporter
                                            Transmembrane     11    27    Psort
                                            Transmembrane     47    63    Psort
                                            Transmembrane     74    90    Psort
                                            Transmembrane     128   144   Psort
                                            Transmembrane     170   186   Psort
                                            Transmembrane     198   214   Psort
                                            Transmembrane     308   324   Psort
                                            Transmembrane     328   344   Psort

FN1151    Na+ driven multidrug efflux pump  Transmembrane     39    55    Psort
                                            Transmembrane     62    78    Psort
                                            Transmembrane     99    115   Psort
                                            Transmembrane     142   158   Psort
                                            Transmembrane     173   189   Psort
                                            Transmembrane     201   217   Psort
                                            Transmembrane     252   268   Psort
                                            Transmembrane     285   301   Psort
                                            Transmembrane     322   338   Psort
                                            Transmembrane     360   376   Psort
                                            Transmembrane     389   405   Psort
                                            Transmembrane     407   423   Psort

FN1153    Fusobacterium-specific protein,   Cleavable N-term  1     17    Psort
          uncharacterized                   signal seq

FN1154    ribonuclease BN                   Cleavable N-term  1     44    Psort
                                            signal seq
                                            Transmembrane     86    102   Psort
                                            Transmembrane     130   146   Psort
                                            Transmembrane     163   179   Psort
                                            Transmembrane     187   203   Psort
                                            Transmembrane     207   223   Psort
                                            Transmembrane     227   243   Psort

FN1155    penicillin-binding protein 3      Uncleavable N-    1     47    Psort
          (cell division protein FtsI);     term signal seq
          possible stage V sporulation
          protein D
                                            Transmembrane     21    37    Psort
                                            Transmembrane     52    68    Psort
                                            Transmembrane     468   484   Psort

FN1158    Fusobacterium-specific protein,   Uncleavable N-    1     23    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     6     22    Psort

FN1163    thioredoxin reductase             Transmembrane     19    35    Psort

FN1164    glucose kinase (glucokinase);     Transmembrane     59    75    Psort
          ROK family protein
                                            Transmembrane     260   276   Psort

FN1165    galactoside ABC transporter,      May be a                      Psort
          periplasmic D-galactose-binding   lipotein (signal
          protein

FN1167    galactoside ABC transporter,      Uncleavable N-    1     56    Psort
          permease protein                  term signal seq
                                            Transmembrane     15    31    Psort
                                            Transmembrane     52    68    Psort
                                            Transmembrane     106   122   Psort
                                            Transmembrane     185   201   Psort
                                            Transmembrane     225   241   Psort
                                            Transmembrane     286   302   Psort
                                            Transmembrane     317   333   Psort

FN1168    probable macrolide-efflux         Uncleavable N-    1     21    Psort
          protein                           term signal seq
                                            Transmembrane     17    33    Psort
                                            Transmembrane     45    61    Psort
                                            Transmembrane     73    89    Psort
                                            Transmembrane     98    114   Psort
                                            Transmembrane     145   161   Psort
                                            Transmembrane     163   179   Psort
                                            Transmembrane     215   231   Psort
                                            Transmembrane     252   268   Psort
                                            Transmembrane     278   294   Psort

FN1172    phosphate                         Transmembrane     322   338   Psort
          acetyltransferase/ethanolamine
          utilization protein

FN1175    hypothetical protein              Transmembrane     26    42    Psort

FN1179    conserved hypothetical protein    Transmembrane     374   390   Psort
          (predicted ATP-dependent RNA
          helicase)

FN1181    conserved hypothetical protein    Uncleavable N-    1     21    Psort
                                            term signal seq

FN1190    copper-transporting ATPase        Transmembrane     343   359   Psort
                                            Transmembrane     688   704   Psort

FN1191    Fusobacterium-specific protein,   Transmembrane     87    103   Psort
          uncharacterized

FN1192    Fusobacterium-specific protein,   Cleavable N-term  1     24    Psort
          uncharacterized                   signal seq

FN1195    hypothetical protein              Transmembrane     77    93    Psort

FN1201    hypothetical protein              Transmembrane     41    57    Psort
                                            Transmembrane     64    80    Psort

FN1202    NH(3)-dependent NAD(+)            Transmembrane     32    48    Psort
          synthetase

FN1206    hemolysin A                       Transmembrane     153   169   Psort

FN1211    penicillin-binding protein 2      Transmembrane     26    42    Psort
                                            Transmembrane     568   584   Psort

FN1212    hypothetical protein              Uncleavable N-    1     57    Psort
                                            term signal seq
                                            Transmembrane     3     19    Psort
                                            Transmembrane     20    36    Psort
                                            Transmembrane     63    79    Psort
                                            Transmembrane     85    101   Psort
                                            Transmembrane     107   123   Psort

FN1213    Fusobacterium-specific protein,   Uncleavable N-    1     57    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     14    30    Psort

FN1218    conserved hypothetical protein    Cleavable N-term  1     15    Psort
                                            signal seq
                                            Transmembrane     185   201   Psort

FN1230    conserved hypothetical protein    Uncleavable N-    1     48    Psort
          (predicted cytosolic protein)     term signal seq

FN1236    membrane spanning protein;        Cleavable N-term  1     20    Psort
          possible permease                 signal seq
                                            Transmembrane     46    62    Psort
                                            Transmembrane     83    99    Psort
                                            Transmembrane     116   132   Psort
                                            Transmembrane     138   154   Psort
                                            Transmembrane     166   182   Psort
                                            Transmembrane     218   234   Psort
                                            Transmembrane     238   254   Psort
                                            Transmembrane     271   287   Psort
                                            Transmembrane     295   311   Psort

FN1237    choline kinase; cholinephosphate  Uncleavable N-    1     14    Psort
          cytidylyltransferase              term signal seq

FN1238    Fusobacterium-specific protein,   Uncleavable N-    1     47    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     6     22    Psort
                                            Transmembrane     32    48    Psort
                                            Transmembrane     81    97    Psort
                                            Transmembrane     113   129   Psort
                                            Transmembrane     140   156   Psort
                                            Transmembrane     162   178   Psort
                                            Transmembrane     186   202   Psort
                                            Transmembrane     292   308   Psort
                                            Transmembrane     342   358   Psort

FN1243    possible two-domain               Uncleavable N-    1     18    Psort
          glycosyltransferase               term signal seq

FN1250    xanthine/uracil permease family   Transmembrane     29    45    Psort
          protein
                                            Transmembrane     55    71    Psort
                                            Transmembrane     103   119   Psort
                                            Transmembrane     142   158   Psort
                                            Transmembrane     174   190   Psort
                                            Transmembrane     195   211   Psort
                                            Transmembrane     246   262   Psort
                                            Transmembrane     334   350   Psort
                                            Transmembrane     363   379   Psort
                                            Transmembrane     387   403   Psort
                                            Transmembrane     430   446   Psort

FN1251    conserved hypothetical protein    Cleavable N-term  1     21    Psort
          (possible cytochrome C family     signal seq
          protein)
                                            Transmembrane     174   190   Psort
                                            Transmembrane     203   219   Psort
                                            Transmembrane     230   246   Psort
                                            Transmembrane     313   329   Psort
                                            Transmembrane     342   358   Psort
                                            Transmembrane     396   412   Psort

FN1252    probable membrane antigen,        May be a                      Psort
          pathogen-specific                 lipotein (signal

FN1256    C4-dicarboxylate transport        Cleavable N-term  1     23    Psort
          system, large subunit (permease)  signal seq
                                            Transmembrane     54    70    Psort
                                            Transmembrane     157   173   Psort
                                            Transmembrane     177   193   Psort
                                            Transmembrane     222   238   Psort
                                            Transmembrane     243   259   Psort
                                            Transmembrane     269   285   Psort
                                            Transmembrane     317   333   Psort
                                            Transmembrane     339   355   Psort
                                            Transmembrane     358   374   Psort
                                            Transmembrane     380   396   Psort
                                            Transmembrane     399   415   Psort

FN1257    predicted C4-dicarboxylate        Uncleavable N-    1     50    Psort
          transport system, small subunit   term signal seq
                                            Transmembrane     3     19    Psort
                                            Transmembrane     35    51    Psort
                                            Transmembrane     77    93    Psort
                                            Transmembrane     119   135   Psort

FN1260    two-component sensor histidine    Uncleavable N-    1     24    Psort
          kinase                            term signal seq
                                            Transmembrane     9     25    Psort
                                            Transmembrane     137   153   Psort
                                            Transmembrane     395   411   Psort

FN1262    conserved hypothetical protein    Cleavable N-term  1     34    Psort
          (predicted integral membrane      signal seq
          protein)
                                            Transmembrane     83    99    Psort
                                            Transmembrane     112   128   Psort
                                            Transmembrane     180   196   Psort
                                            Transmembrane     209   225   Psort
                                            Transmembrane     260   276   Psort
                                            Transmembrane     286   302   Psort
                                            Transmembrane     348   364   Psort
                                            Transmembrane     376   392   Psort
                                            Transmembrane     403   419   Psort

FN1265    outer membrane protein (OmpA      Cleavable N-term  1     14    Psort
          family; 21 kDa)                   signal seq

FN1268    methionyl-tRNA synthetase         Transmembrane     445   461   Psort

FN1271    protease IV                       Uncleavable N-    1     25    Psort
                                            term signal seq
                                            Transmembrane     7     23    Psort

FN1274    cation efflux system              May be a                      Psort
          protein/acriflavin resistance     lipotein (signal
          protein B family

FN1275    acriflavin resistance protein     Cleavable N-term  1     56    Psort
          (AcrB/AcrD/AcrF family)           signal seq
                                            Transmembrane     334   350   Psort
                                            Transmembrane     357   373   Psort
                                            Transmembrane     381   397   Psort
                                            Transmembrane     434   450   Psort
                                            Transmembrane     464   480   Psort
                                            Transmembrane     520   536   Psort
                                            Transmembrane     841   857   Psort
                                            Transmembrane     864   880   Psort
                                            Transmembrane     891   907   Psort
                                            Transmembrane     942   958   Psort
                                            Transmembrane     972   988   Psort

FN1276    Fusobacterium-specific protein,   Transmembrane     86    102   Psort
          uncharacterized

FN1277    aminoacyl-histidine               Transmembrane     351   367   Psort
          dipeptidase/carnosinase

FN1280    possible DNA/RNA non-specific     Transmembrane     93    109   Psort
          endonuclease

FN1283    DNA-directed RNA polymerase,      Uncleavable N-    1     26    Psort
          alpha subunit                     term signal seq

FN1288    hypothetical protein              Transmembrane     28    44    Psort

FN1289    Fusobacterium-specific protein,   Transmembrane     20    36    Psort
          predicted membrane protein
                                            Transmembrane     475   491   Psort

FN1290    Fusobacterium-specific protein,   Transmembrane     319   335   Psort
          predicted membrane protein

FN1291    Fusobacterium-specific protein,   Transmembrane     385   401   Psort
          predicted membrane protein

FN1292    Fusobacterium-specific protein,   Transmembrane     421   437   Psort
          predicted membrane protein

FN1293    Fusobacterium-specific protein,   Transmembrane     367   383   Psort
          predicted membrane protein

FN1298    adenylate kinase                  Cleavable N-term  1     20    Psort
                                            signal seq

FN1300    hypothetical protein              Transmembrane     34    50    Psort
                                            Transmembrane     69    85    Psort
                                            Transmembrane     112   128   Psort
                                            Transmembrane     144   160   Psort
                                            Transmembrane     174   190   Psort
                                            Transmembrane     210   226   Psort
                                            Transmembrane     247   263   Psort

FN1306    conserved hypothetical protein    Transmembrane     99    115   Psort
          (possible hydrolase, ynbC)

FN1307    CDP-alcohol                       Transmembrane     33    49    Psort
          phosphatidyltransferase
                                            Transmembrane     55    71    Psort
                                            Transmembrane     98    114   Psort
                                            Transmembrane     121   137   Psort
                                            Transmembrane     155   171   Psort
                                            Transmembrane     172   188   Psort

FN1308    phosphatidate                     Uncleavable N-    1     14    Psort
          cytidylyltransferase (CDP-        term signal seq
          diglyceride synthase)
                                            Transmembrane     2     18    Psort
                                            Transmembrane     43    59    Psort
                                            Transmembrane     67    83    Psort
                                            Transmembrane     127   143   Psort
                                            Transmembrane     156   172   Psort
                                            Transmembrane     198   214   Psort

FN1310    Fusobacterium-specific protein,   Uncleavable N-    1     27    Psort
          predicted TonB protein            term signal seq

FN1312    biopolymer transport protein      Cleavable N-term  1     24    Psort
          (TolQ)                            signal seq
                                            Transmembrane     110   126   Psort
                                            Transmembrane     158   174   Psort

FN1313    oligopeptide ABC transporter,     May be a                      Psort
          substrate-binding protein         lipotein (signal

FN1314    Fusobacterium-specific protein,   Transmembrane     45    61    Psort
          uncharacterized

FN1315    Fusobacterium-specific protein,   Transmembrane     144   160   Psort
          uncharacterized

FN1322    probable membrane-associated Zn-  Cleavable N-term  1     45    Psort
          dependent protease                signal seq
                                            Transmembrane     89    105   Psort
                                            Transmembrane     265   281   Psort
                                            Transmembrane     283   299   Psort
                                            Transmembrane     318   334   Psort

FN1324    1-deoxy-D-xylulose 5-phosphate    Cleavable N-term  1     20    Psort
          reductoisomerase                  signal seq

FN1325    phosphatidate                     Uncleavable N-    1     20    Psort
          cytidylyltransferase (CDP-        term signal seq
          diglyceride synthase)
                                            Transmembrane     7     23    Psort
                                            Transmembrane     62    78    Psort
                                            Transmembrane     89    105   Psort
                                            Transmembrane     124   140   Psort
                                            Transmembrane     142   158   Psort
                                            Transmembrane     191   207   Psort
                                            Transmembrane     220   236   Psort
                                            Transmembrane     270   286   Psort

FN1333    Fusobacterium-specific protein,   Uncleavable N-    1     32    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     10    26    Psort

FN1334    N-acetylmuramoyl-L-alanine        Cleavable N-term  1     16    Psort
          amidase                           signal seq

FN1335    preprotein translocase,YajC       Uncleavable N-    1     61    Psort
          subunit                           term signal seq
                                            Transmembrane     11    27    Psort

FN1337    hypothetical protein              Transmembrane     71    87    Psort

FN1338    hypothetical protein              Uncleavable N-    1     58    Psort
                                            term signal seq
                                            Transmembrane     46    62    Psort

FN1344    hypothetical protein              Cleavable N-term  1     52    Psort
                                            signal seq
                                            Transmembrane     62    78    Psort
                                            Transmembrane     95    111   Psort

FN1349    ABC transporter permease          Transmembrane     26    42    Psort
                                            Transmembrane     268   284   Psort
                                            Transmembrane     330   346   Psort
                                            Transmembrane     363   379   Psort

FN1350    Fusobacterium-specific protein,   Uncleavable N-    1     52    Psort
          predicted integral membrane       term signal seq
          protein
                                            Transmembrane     9     25    Psort
                                            Transmembrane     46    62    Psort
                                            Transmembrane     71    87    Psort
                                            Transmembrane     124   140   Psort

FN1351    predicted 15 kDa lipoprotein      May be a                      Psort
          precursor                         lipotein (signal

FN1353    ABC transporter, permease         Uncleavable N-    1     35    Psort
          protein                           term signal seq
                                            Transmembrane     23    39    Psort
                                            Transmembrane     276   292   Psort
                                            Transmembrane     330   346   Psort
                                            Transmembrane     364   380   Psort

FN1354    ABC transport system, permease    Cleavable N-term  1     35    Psort
          protein                           signal seq
                                            Transmembrane     304   320   Psort
                                            Transmembrane     349   365   Psort
                                            Transmembrane     391   407   Psort

FN1355    conserved hypothetical protein    Transmembrane     21    37    Psort
          (possible integral membrane
          protein)
                                            Transmembrane     51    67    Psort
                                            Transmembrane     100   116   Psort
                                            Transmembrane     147   163   Psort

FN1356    hypothetical protein              Uncleavable N-    1     39    Psort
                                            term signal seq
                                            Transmembrane     15    31    Psort

FN1357    transposase                       Transmembrane     267   283   Psort

FN1359    dipeptide ABC transporter,        Cleavable N-term  1     24    Psort
          solute-binding protein            signal seq

FN1360    dipeptide ABC transporter,        Cleavable N-term  1     21    Psort
          permease protein                  signal seq
                                            Transmembrane     93    109   Psort
                                            Transmembrane     133   149   Psort
                                            Transmembrane     170   186   Psort
                                            Transmembrane     228   244   Psort
                                            Transmembrane     280   296   Psort

FN1361    dipeptide ABC transporter,        Uncleavable N-    1     21    Psort
          permease protein                  term signal seq
                                            Transmembrane     4     20    Psort
                                            Transmembrane     63    79    Psort
                                            Transmembrane     101   117   Psort
                                            Transmembrane     176   192   Psort
                                            Transmembrane     225   241   Psort

FN1363    oligopeptide ABC transporter,     Transmembrane     149   165   Psort
          ATP-binding protein

FN1364    50S ribosomal protein L32         Uncleavable N-    1     23    Psort
                                            term signal seq

FN1365    GTP-binding protein               Cleavable N-term  1     29    Psort
                                            signal seq

FN1366    triosephosphate isomerase         Transmembrane     38    54    Psort

FN1375    citrate-sodium symport protein    Transmembrane     20    36    Psort
                                            Transmembrane     57    73    Psort
                                            Transmembrane     83    99    Psort
                                            Transmembrane     123   139   Psort
                                            Transmembrane     154   170   Psort
                                            Transmembrane     220   236   Psort
                                            Transmembrane     278   294   Psort
                                            Transmembrane     309   325   Psort
                                            Transmembrane     370   386   Psort
                                            Transmembrane     436   452   Psort

FN1377    citG protein; 2-(5'-              Transmembrane     100   116   Psort
          triphosphoribosyl)-3'-
          dephosphocoenzyme-A synthase
                                            Transmembrane     262   278   Psort

FN1380    citrate lyase, alpha chain        Transmembrane     412   428   Psort

FN1385    Fusobacterium-specific protein,   Transmembrane     361   377   Psort
          uncharacterized

FN1396    hypothetical protein              Uncleavable N-    1     20    Psort
                                            term signal seq
                                            Transmembrane     2     18    Psort
                                            Transmembrane     23    39    Psort

FN1397    glutaminase                       Transmembrane     57    73    Psort

FN1398    amino acid carrier protein;       Uncleavable N-    1     40    Psort
          sodium/alanine symporter family   term signal seq
                                            Transmembrane     14    30    Psort
                                            Transmembrane     87    103   Psort
                                            Transmembrane     152   168   Psort
                                            Transmembrane     188   204   Psort
                                            Transmembrane     217   233   Psort
                                            Transmembrane     307   323   Psort
                                            Transmembrane     354   370   Psort
                                            Transmembrane     388   404   Psort
                                            Transmembrane     416   432   Psort

FN1400    possible serine/threonine kinase  Transmembrane     406   422   Psort
          (regulatory protein)
                                            Transmembrane     953   969   Psort

FN1402    conserved hypothetical protein    Uncleavable N-    1     28    Psort
          (predicted membrane-spanning      term signal seq
          protein)
                                            Transmembrane     11    27    Psort
                                            Transmembrane     50    66    Psort
                                            Transmembrane     78    94    Psort
                                            Transmembrane     115   131   Psort
                                            Transmembrane     162   178   Psort
                                            Transmembrane     194   210   Psort
                                            Transmembrane     223   239   Psort
                                            Transmembrane     305   321   Psort
                                            Transmembrane     377   393   Psort

FN1403    conserved hypothetical protein    Cleavable N-term  1     40    Psort
          (possible transporter protein)    signal seq
                                            Transmembrane     97    113   Psort
                                            Transmembrane     115   131   Psort
                                            Transmembrane     188   204   Psort
                                            Transmembrane     236   252   Psort
                                            Transmembrane     253   269   Psort
                                            Transmembrane     289   305   Psort
                                            Transmembrane     332   348   Psort
                                            Transmembrane     365   381   Psort
                                            Transmembrane     417   433   Psort

FN1405    probable                          Transmembrane     30    46    Psort
          formiminotetrahydrofolate
          cyclodeaminase

FN1406    histidine ammonia-lyase           Transmembrane     222   238   Psort

FN1409    conserved hypothetical protein    Uncleavable N-    1     26    Psort
          (possible transporter protein)    term signal seq
                                            Transmembrane     17    33    Psort
                                            Transmembrane     81    97    Psort
                                            Transmembrane     119   135   Psort
                                            Transmembrane     142   158   Psort
                                            Transmembrane     163   179   Psort
                                            Transmembrane     204   220   Psort

FN1410    conserved hypothetical protein    Cleavable N-term  1     54    Psort
          (possible S-transferase)          signal seq
                                            Transmembrane     140   156   Psort

FN1411    threonine dehydratase             Transmembrane     171   187   Psort

FN1414    Na+/H+ antiporter (NhaC)          Cleavable N-term  1     34    Psort
                                            signal seq
                                            Transmembrane     63    79    Psort
                                            Transmembrane     101   117   Psort
                                            Transmembrane     139   155   Psort
                                            Transmembrane     185   201   Psort
                                            Transmembrane     219   235   Psort
                                            Transmembrane     236   252   Psort
                                            Transmembrane     276   292   Psort
                                            Transmembrane     311   327   Psort
                                            Transmembrane     376   392   Psort
                                            Transmembrane     396   412   Psort

FN1416    transcriptional regulator, GntR   Transmembrane     295   311   Psort
          family; aminotransferase, MocR-
          like

FN1420    Na+/H+ antiporter (NhaC)          Cleavable N-term  1     47    Psort
                                            signal seq
                                            Transmembrane     76    92    Psort
                                            Transmembrane     115   131   Psort
                                            Transmembrane     132   148   Psort
                                            Transmembrane     152   168   Psort
                                            Transmembrane     200   216   Psort
                                            Transmembrane     238   254   Psort
                                            Transmembrane     258   274   Psort
                                            Transmembrane     327   343   Psort
                                            Transmembrane     379   395   Psort
                                            Transmembrane     415   431   Psort

FN1422    Na+/H+ antiporter (NhaC)          Uncleavable N-    1     45    Psort
                                            term signal seq
                                            Transmembrane     2     18    Psort
                                            Transmembrane     24    40    Psort
                                            Transmembrane     61    77    Psort
                                            Transmembrane     96    112   Psort
                                            Transmembrane     183   199   Psort
                                            Transmembrane     222   238   Psort
                                            Transmembrane     246   262   Psort
                                            Transmembrane     301   317   Psort
                                            Transmembrane     340   356   Psort
                                            Transmembrane     426   442   Psort

FN1425    hypothetical protein              Transmembrane     50    66    Psort

FN1429    branched-chain amino acid ABC     Transmembrane     207   223   Psort
          transporter, ATP-binding protein

FN1430    branched-chain amino acid ABC     Cleavable N-term  1     36    Psort
          transporter, permease protein     signal seq
                                            Transmembrane     54    70    Psort
                                            Transmembrane     81    97    Psort
                                            Transmembrane     120   136   Psort
                                            Transmembrane     166   182   Psort
                                            Transmembrane     203   219   Psort
                                            Transmembrane     220   236   Psort
                                            Transmembrane     237   253   Psort

FN1431    branched-chain amino acid ABC     Transmembrane     54    70    Psort
          transporter, permease protein
                                            Transmembrane     78    94    Psort
                                            Transmembrane     153   169   Psort
                                            Transmembrane     208   224   Psort
                                            Transmembrane     233   249   Psort
                                            Transmembrane     251   267   Psort
                                            Transmembrane     278   294   Psort

FN1432    branched-chain amino acid ABC     May be a                      Psort
          transporter, amino acid-binding   lipotein (signal
          protein (probable
          leucine/isoleucine/valine-
          binding protein)

FN1435    possible export ABC transporter,  May be a                      Psort
          ATP-binding protein               lipotein (signal

FN1436    ABC transporter, ATP-             Transmembrane     35    51    Psort
          binding/permease protein
                                            Transmembrane     73    89    Psort

FN1438    hypothetical protein              Uncleavable N-    1     18    Psort
                                            term signal seq
                                            Transmembrane     8     24    Psort

FN1439    sugar-binding transcriptional     Uncleavable N-    1     37    Psort
          regulator (DeoR family)           term signal seq

FN1440    fructose 1-phosphate kinase       Transmembrane     251   267   Psort

FN1441    PTS system, fructose-specific     Transmembrane     294   310   Psort
          IIBC component
                                            Transmembrane     330   346   Psort
                                            Transmembrane     369   385   Psort
                                            Transmembrane     410   426   Psort
                                            Transmembrane     444   460   Psort
                                            Transmembrane     482   498   Psort
                                            Transmembrane     521   537   Psort
                                            Transmembrane     541   557   Psort
                                            Transmembrane     585   601   Psort

FN1444    GMP synthase                      Transmembrane     219   235   Psort
                                            Transmembrane     431   447   Psort

FN1450    conserved hypothetical protein    Uncleavable N-    1     19    Psort
          (possible transport protein       term signal seq
          ybjL)
                                            Transmembrane     2     18    Psort
                                            Transmembrane     32    48    Psort
                                            Transmembrane     78    94    Psort
                                            Transmembrane     109   125   Psort
                                            Transmembrane     239   255   Psort
                                            Transmembrane     292   308   Psort
                                            Transmembrane     320   336   Psort
                                            Transmembrane     383   399   Psort
                                            Transmembrane     452   468   Psort

FN1457    UDP-N-acetylglucosamine--N-       Transmembrane     92    108   Psort
          acetylmuramyl-(pentapeptide)
          pyrophosphoryl-undecaprenol N-
          acetylglucosamine transferase
                                            Transmembrane     253   269   Psort

FN1459    phospho-N-acetylmuramoyl-         Transmembrane     20    36    Psort
          pentapeptide-transferase
                                            Transmembrane     70    86    Psort
                                            Transmembrane     94    110   Psort
                                            Transmembrane     130   146   Psort
                                            Transmembrane     169   185   Psort
                                            Transmembrane     198   214   Psort
                                            Transmembrane     237   253   Psort
                                            Transmembrane     266   282   Psort
                                            Transmembrane     288   304   Psort
                                            Transmembrane     340   356   Psort

FN1460    Fusobacterium-specific protein,   Transmembrane     32    48    Psort
          predicted cytosolic protein

FN1465    probable transporter permease,    Uncleavable N-    1     26    Psort
          drug/metabolite exporter (DMT)    term signal seq
          superfamily
                                            Transmembrane     10    26    Psort
                                            Transmembrane     39    55    Psort
                                            Transmembrane     66    82    Psort
                                            Transmembrane     97    113   Psort
                                            Transmembrane     122   138   Psort
                                            Transmembrane     153   169   Psort
                                            Transmembrane     184   200   Psort
                                            Transmembrane     212   228   Psort
                                            Transmembrane     243   259   Psort
                                            Transmembrane     268   284   Psort

FN1468    flavoredoxin                      Uncleavable N-    1     42    Psort
                                            term signal seq
                                            Transmembrane     6     22    Psort

FN1469    Na+ driven multidrug efflux pump  Transmembrane     19    35    Psort
                                            Transmembrane     50    66    Psort
                                            Transmembrane     92    108   Psort
                                            Transmembrane     133   149   Psort
                                            Transmembrane     167   183   Psort
                                            Transmembrane     192   208   Psort
                                            Transmembrane     249   265   Psort
                                            Transmembrane     313   329   Psort
                                            Transmembrane     361   377   Psort
                                            Transmembrane     391   407   Psort
                                            Transmembrane     411   427   Psort

FN1472    N-acetyneuraminate-binding        Cleavable N-term  1     22    Psort
          protein                           signal seq

FN1473    N-acetylneuraminate permease,     Uncleavable N-    1     32    Psort
          small subunit/C4-dicarboxylate    term signal seq
          transport system, large permease
          component (TRAP-type)
                                            Transmembrane     11    27    Psort
                                            Transmembrane     46    62    Psort
                                            Transmembrane     82    98    Psort
                                            Transmembrane     123   139   Psort
                                            Transmembrane     156   172   Psort
                                            Transmembrane     204   220   Psort
                                            Transmembrane     243   259   Psort
                                            Transmembrane     332   348   Psort
                                            Transmembrane     361   377   Psort
                                            Transmembrane     409   425   Psort
                                            Transmembrane     430   446   Psort
                                            Transmembrane     462   478   Psort
                                            Transmembrane     504   520   Psort
                                            Transmembrane     521   537   Psort
                                            Transmembrane     544   560   Psort
                                            Transmembrane     586   602   Psort

FN1474    glucose kinase (ROK family        Transmembrane     126   142   Psort
          protein)/N-acetylmannosamine
          kinase

FN1477    conserved hypothetical protein    Uncleavable N-    1     28    Psort
          (possible membrane-spanning       term signal seq
          protein)
                                            Transmembrane     9     25    Psort
                                            Transmembrane     36    52    Psort
                                            Transmembrane     61    77    Psort
                                            Transmembrane     102   118   Psort
                                            Transmembrane     128   144   Psort
                                            Transmembrane     163   179   Psort
                                            Transmembrane     190   206   Psort
                                            Transmembrane     222   238   Psort

FN1478    Fusobacterium-specific protein,   Cleavable N-term  1     18    Psort
          uncharacterized                   signal seq

FN1480    Mg2+ transport protein            Transmembrane     284   300   Psort
                                            Transmembrane     306   322   Psort
                                            Transmembrane     360   376   Psort
                                            Transmembrane     388   404   Psort
                                            Transmembrane     430   446   Psort

FN1482    GTP pyrophosphokinase/G-3',5'-    Transmembrane     121   137   Psort
          bis(diphosphate) 3'
          pyrophosphohydrolase
                                            Transmembrane     394   410   Psort

FN1483    adenine                           Transmembrane     61    77    Psort
          phosphoribosyltransferase
                                            Transmembrane     137   153   Psort

FN1485    conserved hypothetical protein    Uncleavable N-    1     58    Psort
          (possible transmembrane protein)  term signal seq
                                            Transmembrane     11    27    Psort
                                            Transmembrane     63    79    Psort

FN1486    hemolysin-related protein;        Cleavable N-term  1     22    Psort
          probably CBS domain-containing    signal seq
                                            Transmembrane     70    86    Psort
                                            Transmembrane     93    109   Psort
                                            Transmembrane     131   147   Psort
                                            Transmembrane     301   317   Psort

FN1488    methylenetetrahydrofolate         Transmembrane     253   269   Psort
          dehydrogenase

FN1493    Fusobacterium-specific protein,   Cleavable N-term  1     18    Psort
          uncharacterized                   signal seq

FN1495    hypothetical protein              Cleavable N-term  1     18    Psort
                                            signal seq

FN1497    conserved hypothetical protein    Cleavable N-term  1     43    Psort
          (predicted multidrug resistance   signal seq
          protein 2)
                                            Transmembrane     53    69    Psort
                                            Transmembrane     71    87    Psort
                                            Transmembrane     127   143   Psort
                                            Transmembrane     147   163   Psort
                                            Transmembrane     231   247   Psort
                                            Transmembrane     257   273   Psort
                                            Transmembrane     279   295   Psort
                                            Transmembrane     318   334   Psort
                                            Transmembrane     348   364   Psort

FN1498    conserved hypothetical protein    Uncleavable N-    1     26    Psort
          (predicted integral membrane      term signal seq
          protein)
                                            Transmembrane     9     25    Psort
                                            Transmembrane     37    53    Psort
                                            Transmembrane     72    88    Psort
                                            Transmembrane     101   117   Psort
                                            Transmembrane     129   145   Psort
                                            Transmembrane     202   218   Psort
                                            Transmembrane     225   241   Psort
                                            Transmembrane     277   293   Psort

FN1499    possible cell surface protein     Cleavable N-term  1     55    Psort
          (stress protein uspA)             signal seq

FN1501    nickel  ABC transporter, ATP-     Transmembrane     157   173   Psort
          binding protein

FN1502    nickel ABC transporter, permease  Cleavable N-term  1     25    Psort
          protein                           signal seq
                                            Transmembrane     81    97    Psort
                                            Transmembrane     119   135   Psort
                                            Transmembrane     137   153   Psort
                                            Transmembrane     200   216   Psort
                                            Transmembrane     247   263   Psort

FN1503    nickel ABC transporter, permease  Cleavable N-term  1     34    Psort
          protein                           signal seq
                                            Transmembrane     105   121   Psort
                                            Transmembrane     140   156   Psort
                                            Transmembrane     171   187   Psort
                                            Transmembrane     229   245   Psort
                                            Transmembrane     273   289   Psort

FN1508    GTP cyclohydrolase II             Transmembrane     149   165   Psort

FN1509    hypothetical protein              Uncleavable N-    1     18    Psort
                                            term signal seq
                                            Transmembrane     5     21    Psort

FN1510    hypothetical protein              Uncleavable N-    1     22    Psort
                                            term signal seq

FN1512    phophatidylinositol-4-phosphate   Transmembrane     45    61    Psort
          5-kinase

FN1515    phophatidylinositol-4-phosphate   Uncleavable N-    1     19    Psort
          5-kinase                          term signal seq
                                            Transmembrane     4     20    Psort

FN1516    Fusobacterium-specific protein,   Cleavable N-term  1     42    Psort
          uncharacterized                   signal seq

FN1517    leucyl-tRNA synthetase            Transmembrane     840   856   Psort

FN1520    UDP-N-acetylglucosamine 1-        Transmembrane     236   252   Psort
          carboxyvinyltransferase

FN1521    dipeptide ABC transporter,        Cleavable N-term  1     26    Psort
          permease protein                  signal seq
                                            Transmembrane     110   126   Psort
                                            Transmembrane     146   162   Psort
                                            Transmembrane     232   248   Psort
                                            Transmembrane     281   297   Psort

FN1522    dipeptide transport system,       Cleavable N-term  1     27    Psort
          permease protein                  signal seq
                                            Transmembrane     81    97    Psort
                                            Transmembrane     116   132   Psort
                                            Transmembrane     191   207   Psort
                                            Transmembrane     242   258   Psort

FN1523    nickel or dipeptide ABC-type      May be a                      Psort
          transport system, periplasmic     lipotein (signal
          transport protein
                                            Transmembrane     159   175   Psort

FN1525    oligopeptide ABC transporter,     Transmembrane     222   238   Psort
          ATP-binding protein

FN1527    Fusobacterium-specific protein,   May be a                      Psort
          uncharacterized                   lipotein (signal

FN1529    Fusobacterium-specific protein,   Uncleavable N-    1     18    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     4     20    Psort

FN1531    murein hydrolase export           Transmembrane     13    29    Psort
          regulator (LrgB family protein)
                                            Transmembrane     50    66    Psort
                                            Transmembrane     77    93    Psort
                                            Transmembrane     108   124   Psort
                                            Transmembrane     163   179   Psort
                                            Transmembrane     221   237   Psort

FN1532    conserved hypothetical protein    Cleavable N-term  1     46    Psort
          (predicted murein hydrolase       signal seq
          exporter)
                                            Transmembrane     59    75    Psort
                                            Transmembrane     84    100   Psort

FN1533    electron transfer flavoprotein    Transmembrane     299   315   Psort
          alpha-subunit

FN1537    arsenical pump-driving ATPase     Cleavable N-term  1     25    Psort
          (ArsA ATPase family protein)      signal seq

FN1539    conserved hypothetical protein    Transmembrane     164   180   Psort
          (possible YkgG family protein)

FN1540    iron-sulfur cluster-binding       Transmembrane     314   330   Psort
          protein
                                            Transmembrane     477   493   Psort

FN1542    1,4-dihydroxy-2-naphthoate        Transmembrane     20    36    Psort
          octaprenyltransferase
                                            Transmembrane     40    56    Psort
                                            Transmembrane     98    114   Psort
                                            Transmembrane     120   136   Psort
                                            Transmembrane     152   168   Psort
                                            Transmembrane     178   194   Psort
                                            Transmembrane     227   243   Psort
                                            Transmembrane     287   303   Psort

FN1544    flavoprotein; probably electron   Cleavable N-term  1     25    Psort
          transport                         signal seq

FN1546    translation elongation factor     Transmembrane     93    109   Psort
          EF-G

FN1547    PTS system N-acetylglucosamine-   Cleavable N-term  1     21    Psort
          specific IIBC component           signal seq
                                            Transmembrane     50    66    Psort
                                            Transmembrane     77    93    Psort
                                            Transmembrane     153   169   Psort
                                            Transmembrane     259   275   Psort
                                            Transmembrane     286   302   Psort
                                            Transmembrane     308   324   Psort
                                            Transmembrane     365   381   Psort

FN1548    Fusobacterium-specific protein,   Cleavable N-term  1     41    Psort
          uncharacterized                   signal seq
                                            Transmembrane     47    63    Psort

FN1549    integral membrane protease        Uncleavable N-    1     24    Psort
                                            term signal seq
                                            Transmembrane     6     22    Psort

FN1551    hypothetical protein              Transmembrane     33    49    Psort
                                            Transmembrane     73    89    Psort
                                            Transmembrane     162   178   Psort

FN1559    Na+/H+ antiporter                 Cleavable N-term  1     44    Psort
                                            signal seq
                                            Transmembrane     59    75    Psort
                                            Transmembrane     88    104   Psort
                                            Transmembrane     189   205   Psort
                                            Transmembrane     233   249   Psort
                                            Transmembrane     267   283   Psort
                                            Transmembrane     295   311   Psort
                                            Transmembrane     331   347   Psort
                                            Transmembrane     354   370   Psort

FN1580    4-diphosphocytidyl-2C-methyl-D-   Uncleavable N-    1     49    Psort
          erythritol synthase               term signal seq

FN1581    DNA mismatch repair protein       Uncleavable N-    1     42    Psort
          (mutS)                            term signal seq
                                            Transmembrane     340   356   Psort

FN1585    conserved hypothetical protein    May be a                      Psort
          (possible yjcL protein)           lipotein (signal
                                            Transmembrane     34    50    Psort
                                            Transmembrane     64    80    Psort
                                            Transmembrane     95    111   Psort
                                            Transmembrane     162   178   Psort
                                            Transmembrane     219   235   Psort
                                            Transmembrane     258   274   Psort
                                            Transmembrane     285   301   Psort
                                            Transmembrane     310   326   Psort
                                            Transmembrane     369   385   Psort

FN1586    mandelate racemase/muconate       Transmembrane     292   308   Psort
          lactonizing enzyme

FN1588    hypothetical protein              Transmembrane     30    46    Psort

FN1590    conserved hypothetical protein    Cleavable N-term  1     21    Psort
          (predicted lipoprotein)           signal seq

FN1591    electron transport complex        Cleavable N-term  1     53    Psort
          protein; iron-sulfur cluster      signal seq
          binding protein (rnfB)

FN1592    electron transport complex        Cleavable N-term  1     56    Psort
          protein; Na-transporting          signal seq
          NADH:ubiquinone oxidoreductase
                                            Transmembrane     78    94    Psort
                                            Transmembrane     108   124   Psort
                                            Transmembrane     140   156   Psort
                                            Transmembrane     171   187   Psort

FN1593    electron transport complex        Cleavable N-term  1     53    Psort
          protein; Na-transporting          signal seq
          NADH:ubiquinone oxidoreductase
                                            Transmembrane     70    86    Psort
                                            Transmembrane     96    112   Psort
                                            Transmembrane     170   186   Psort

FN1594    electron transport complex        Uncleavable N-    1     35    Psort
          protein; nitrogen fixation        term signal seq
          protein rnfG
                                            Transmembrane     10    26    Psort

FN1595    electron transport complex        Transmembrane     22    38    Psort
          protein; Na-translocating NADH-
          quinone reductase
                                            Transmembrane     42    58    Psort
                                            Transmembrane     79    95    Psort
                                            Transmembrane     98    114   Psort
                                            Transmembrane     210   226   Psort
                                            Transmembrane     230   246   Psort
                                            Transmembrane     260   276   Psort

FN1602    conserved hypothetical protein    Uncleavable N-    1     59    Psort
                                            term signal seq

FN1608    50S ribosomal protein L11         Transmembrane     242   258   Psort
          methyltransferase

FN1615    conserved hypothetical protein    Cleavable N-term  1     52    Psort
          (probable integral membrane       signal seq
          protein)
                                            Transmembrane     73    89    Psort
                                            Transmembrane     107   123   Psort
                                            Transmembrane     138   154   Psort
                                            Transmembrane     167   183   Psort

FN1617    predicted permease;               Transmembrane     33    49    Psort
          prolipoprotein diacylglyceryl
          transferase

FN1618    Fusobacterium-specific protein,   Transmembrane     31    47    Psort
          uncharacterized

FN1624    preprotein translocase, SecY      Transmembrane     24    40    Psort
          subunit
                                            Transmembrane     81    97    Psort
                                            Transmembrane     122   138   Psort
                                            Transmembrane     175   191   Psort
                                            Transmembrane     214   230   Psort
                                            Transmembrane     269   285   Psort
                                            Transmembrane     312   328   Psort
                                            Transmembrane     372   388   Psort
                                            Transmembrane     390   406   Psort

FN1630    30S ribosomal protein S8          Transmembrane     97    113   Psort

FN1647    Fusobacterium-specific protein,   Uncleavable N-    1     13    Psort
          uncharacterized                   term signal seq

FN1649    oligopeptide ABC transporter,     Transmembrane     164   180   Psort
          ATP binding protein

FN1650    dipeptide ABC transporter,        Transmembrane     50    66    Psort
          permease protein
                                            Transmembrane     86    102   Psort
                                            Transmembrane     103   119   Psort
                                            Transmembrane     151   167   Psort
                                            Transmembrane     213   229   Psort

FN1651    oligopeptide transport system     Uncleavable N-    1     19    Psort
          permease protein                  term signal seq
                                            Transmembrane     13    29    Psort
                                            Transmembrane     102   118   Psort
                                            Transmembrane     137   153   Psort
                                            Transmembrane     168   184   Psort
                                            Transmembrane     253   269   Psort
                                            Transmembrane     278   294   Psort

FN1652    dipeptide/oligopeptide/nickel     Cleavable N-term  1     46    Psort
          ABC-type transport system,        signal seq
          periplasmic component

FN1653    multidrug cation efflux pump      Transmembrane     15    31    Psort
          (possibly Na+-driven)
                                            Transmembrane     65    81    Psort
                                            Transmembrane     101   117   Psort
                                            Transmembrane     132   148   Psort
                                            Transmembrane     181   197   Psort
                                            Transmembrane     202   218   Psort
                                            Transmembrane     320   336   Psort
                                            Transmembrane     360   376   Psort
                                            Transmembrane     395   411   Psort
                                            Transmembrane     423   439   Psort

FN1658    prolyl-tRNA synthetase            Transmembrane     461   477   Psort

FN1659    hypothetical protein              Cleavable N-term  1     24    Psort
                                            signal seq
                                            Transmembrane     93    109   Psort
                                            Transmembrane     148   164   Psort
                                            Transmembrane     171   187   Psort
                                            Transmembrane     198   214   Psort

FN1660    ATP-dependent DNA helicase        Transmembrane     296   312   Psort

FN1668    Ctp:phosphocholine                Uncleavable N-    1     16    Psort
          cytidylyltransferase              term signal seq

FN1669    lic-1 operon protein (licB);      Uncleavable N-    1     19    Psort
          possible choline transport        term signal seq
          protein
                                            Transmembrane     8     24    Psort
                                            Transmembrane     76    92    Psort
                                            Transmembrane     109   125   Psort
                                            Transmembrane     134   150   Psort
                                            Transmembrane     162   178   Psort
                                            Transmembrane     205   221   Psort
                                            Transmembrane     230   246   Psort
                                            Transmembrane     266   282   Psort
                                            Transmembrane     286   302   Psort

FN1671    conserved hypothetical protein    Uncleavable N-    1     55    Psort
          (predicted ABC transporter ATP-   term signal seq
          binding protein)
                                            Transmembrane     4     20    Psort

FN1672    alginate o-acetyltransferase      Uncleavable N-    1     42    Psort
                                            term signal seq
                                            Transmembrane     6     22    Psort
                                            Transmembrane     48    64    Psort
                                            Transmembrane     71    87    Psort
                                            Transmembrane     182   198   Psort
                                            Transmembrane     367   383   Psort
                                            Transmembrane     421   437   Psort
                                            Transmembrane     457   473   Psort

FN1675    IS605/IS200-like transposase      Uncleavable N-    1     26    Psort
                                            term signal seq
                                            Transmembrane     2     18    Psort

FN1676    transposase                       Transmembrane     267   283   Psort

FN1682    capsular polysaccharide           Uncleavable N-    1     60    Psort
          biosynthesis protein              term signal seq
                                            Transmembrane     15    31    Psort
                                            Transmembrane     45    61    Psort
                                            Transmembrane     87    103   Psort
                                            Transmembrane     118   134   Psort
                                            Transmembrane     149   165   Psort
                                            Transmembrane     178   194   Psort
                                            Transmembrane     213   229   Psort
                                            Transmembrane     256   272   Psort
                                            Transmembrane     295   311   Psort
                                            Transmembrane     326   342   Psort
                                            Transmembrane     365   381   Psort
                                            Transmembrane     454   470   Psort

FN1684    N-acetylneuraminic acid           Transmembrane     219   235   Psort
          synthetase

FN1685    dTDP-4-dehydrorhamnose reductase  Uncleavable N-    1     15    Psort
                                            term signal seq
                                            Transmembrane     4     20    Psort

FN1686    spore coat polysaccharide         Uncleavable N-    1     52    Psort
          biosynthesis protein F            term signal seq

FN1691    conserved hypothetical protein    Uncleavable N-    1     42    Psort
          (predicted membrane-spanning      term signal seq
          protein)
                                            Transmembrane     2     18    Psort
                                            Transmembrane     25    41    Psort
                                            Transmembrane     76    92    Psort
                                            Transmembrane     151   167   Psort
                                            Transmembrane     179   195   Psort
                                            Transmembrane     255   271   Psort
                                            Transmembrane     281   297   Psort
                                            Transmembrane     305   321   Psort

FN1692    glycosyltransferase               Transmembrane     22    38    Psort

FN1695    glycosyltransferase               Uncleavable N-    1     38    Psort
                                            term signal seq
                                            Transmembrane     18    34    Psort

FN1696    capsular polysaccharide           Cleavable N-term  1     28    Psort
          biosynthesis protein (possible    signal seq
          nucleoside-diphosphate sugar
          epimerase)
                                            Transmembrane     46    62    Psort
                                            Transmembrane     76    92    Psort
                                            Transmembrane     109   125   Psort

FN1697    hypothetical protein              Transmembrane     33    49    Psort
                                            Transmembrane     298   314   Psort

FN1702    undecaprenol kinase (bacitracin   Transmembrane     2     18    Psort
          resistance protein)
                                            Transmembrane     43    59    Psort
                                            Transmembrane     81    97    Psort
                                            Transmembrane     110   126   Psort
                                            Transmembrane     219   235   Psort
                                            Transmembrane     249   265   Psort

FN1703    ADP-L-glycero-D-mannoheptose-6-   Uncleavable N-    1     16    Psort
          epimerase                         term signal seq

FN1704    probable serine protease          Uncleavable N-    1     19    Psort
                                            term signal seq

FN1706    conserved hypothetical protein    Cleavable N-term  1     20    Psort
          (possible membrane protein)       signal seq
                                            Transmembrane     75    91    Psort
                                            Transmembrane     102   118   Psort
                                            Transmembrane     153   169   Psort
                                            Transmembrane     183   199   Psort
                                            Transmembrane     210   226   Psort
                                            Transmembrane     236   252   Psort

FN1708    polyribonucleotide                Transmembrane     142   158   Psort
          nucleotidyltransferase

FN1709    CDP-diacylglycerol--glycerol-3-   Uncleavable N-    1     27    Psort
          phosphate 3-                      term signal seq
          phosphatidyltransferase
                                            Transmembrane     7     23    Psort
                                            Transmembrane     31    47    Psort
                                            Transmembrane     72    88    Psort
                                            Transmembrane     97    113   Psort
                                            Transmembrane     134   150   Psort
                                            Transmembrane     154   170   Psort

FN1710    predicted integral membrane       Transmembrane     16    32    Psort
          protein, YggT family
                                            Transmembrane     74    90    Psort

FN1712    Fusobacterium-specific protein,   Uncleavable N-    1     17    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     7     23    Psort

FN1715    probable ATPase                   Transmembrane     224   240   Psort

FN1716    Fusobacterium-specific protein,   May be a                      Psort
          uncharacterized                   lipotein (signal

FN1720    Fusobacterium-specific protein,   Uncleavable N-    1     27    Psort
          possible ATPase                   term signal seq
                                            Transmembrane     8     24    Psort

FN1724    potassium uptake protein, NAD-    Transmembrane     70    86    Psort
          binding component (TrkA)

FN1725    potassium uptake protein (KtrB)   Uncleavable N-    1     42    Psort
                                            term signal seq
                                            Transmembrane     18    34    Psort
                                            Transmembrane     51    67    Psort
                                            Transmembrane     69    85    Psort
                                            Transmembrane     87    103   Psort
                                            Transmembrane     134   150   Psort
                                            Transmembrane     195   211   Psort
                                            Transmembrane     235   251   Psort
                                            Transmembrane     292   308   Psort
                                            Transmembrane     317   333   Psort
                                            Transmembrane     357   373   Psort
                                            Transmembrane     402   418   Psort

FN1726    Na+ driven multidrug efflux pump  Transmembrane     16    32    Psort
          (possible mviN domain)
                                            Transmembrane     59    75    Psort
                                            Transmembrane     99    115   Psort
                                            Transmembrane     140   156   Psort
                                            Transmembrane     173   189   Psort
                                            Transmembrane     241   257   Psort
                                            Transmembrane     279   295   Psort
                                            Transmembrane     323   339   Psort
                                            Transmembrane     366   382   Psort
                                            Transmembrane     400   416   Psort

FN1727    chloride channel protein          Uncleavable N-    1     39    Psort
                                            term signal seq
                                            Transmembrane     18    34    Psort
                                            Transmembrane     60    76    Psort
                                            Transmembrane     111   127   Psort
                                            Transmembrane     193   209   Psort
                                            Transmembrane     235   251   Psort
                                            Transmembrane     272   288   Psort
                                            Transmembrane     307   323   Psort
                                            Transmembrane     330   346   Psort
                                            Transmembrane     376   392   Psort
                                            Transmembrane     398   414   Psort
                                            Transmembrane     462   478   Psort
                                            Transmembrane     491   507   Psort

FN1731    anthranilate synthase component   Transmembrane     77    93    Psort
          II

FN1734    V-type sodium ATP synthase        Uncleavable N-    1     36    Psort
          subunit B                         term signal seq

FN1737    V-type sodium ATP synthase        Transmembrane     16    32    Psort
          subunit G

FN1740    V-type sodium ATP synthase        Uncleavable N-    1     35    Psort
          subunit K                         term signal seq
                                            Transmembrane     14    30    Psort
                                            Transmembrane     68    84    Psort
                                            Transmembrane     94    110   Psort
                                            Transmembrane     134   150   Psort

FN1741    V-type sodium ATP synthase        Transmembrane     358   374   Psort
          subunit I
                                            Transmembrane     376   392   Psort
                                            Transmembrane     403   419   Psort
                                            Transmembrane     444   460   Psort
                                            Transmembrane     480   496   Psort
                                            Transmembrane     508   524   Psort
                                            Transmembrane     560   576   Psort
                                            Transmembrane     578   594   Psort

FN1744    possible permease of the          Cleavable N-term  1     23    Psort
          drug/metabolite transporter       signal seq
          (DMT) superfamily
                                            Transmembrane     36    52    Psort
                                            Transmembrane     100   116   Psort
                                            Transmembrane     126   142   Psort
                                            Transmembrane     183   199   Psort
                                            Transmembrane     215   231   Psort
                                            Transmembrane     246   262   Psort
                                            Transmembrane     269   285   Psort

FN1746    cystathionine gamma-              Uncleavable N-    1     39    Psort
          synthase/cystathionine beta-      term signal seq
          lyase

FN1747    Na(+)-linked D-alanine/glycine    Transmembrane     29    45    Psort
          permease
                                            Transmembrane     78    94    Psort
                                            Transmembrane     161   177   Psort
                                            Transmembrane     197   213   Psort
                                            Transmembrane     227   243   Psort
                                            Transmembrane     320   336   Psort
                                            Transmembrane     358   374   Psort
                                            Transmembrane     410   426   Psort
                                            Transmembrane     439   455   Psort

FN1755    molybdopterin biosynthesis        Transmembrane     25    41    Psort
          protein (thiamine biosynthesis
          thiF family)

FN1757    thiamine biosynthesis protein     Transmembrane     311   327   Psort

FN1762    conserved hypothetical protein    Transmembrane     106   122   Psort
          (possible yaaA protein)

FN1764    enolase                           Transmembrane     110   126   Psort

FN1765    pyruvate kinase                   Uncleavable N-    1     58    Psort
                                            term signal seq

FN1780    conserved hypothetical protein    Cleavable N-term  1     58    Psort
                                            signal seq

FN1781    30S ribosomal protein S1          Uncleavable N-    1     17    Psort
                                            term signal seq
                                            Transmembrane     472   488   Psort

FN1783    ethanolamine utilization protein  Transmembrane     29    45    Psort
          (eutJ)/DnaK chaperone

FN1784    Fusobacterium-specific protein,   Cleavable N-term  1     18    Psort
          uncharacterized                   signal seq

FN1785    Fusobacterium-specific protein,   Cleavable N-term  1     18    Psort
          uncharacterized                   signal seq

FN1788    2-C-methyl-D-erythritol 2,4-      Transmembrane     40    56    Psort
          cyclodiphosphate synthase
          (MECPS)

FN1789    Na+ driven multidrug efflux pump  Transmembrane     20    36    Psort
                                            Transmembrane     64    80    Psort
                                            Transmembrane     103   119   Psort
                                            Transmembrane     142   158   Psort
                                            Transmembrane     202   218   Psort
                                            Transmembrane     291   307   Psort
                                            Transmembrane     328   344   Psort
                                            Transmembrane     368   384   Psort
                                            Transmembrane     395   411   Psort

FN1793    phosphoenolpyruvate-protein       Transmembrane     519   535   Psort
          phosphotransferase

FN1795    hypothetical protein              Transmembrane     27    43    Psort

FN1798    spermidine/putrescine ABC         Uncleavable N-    1     39    Psort
          transporter, permease protein     term signal seq
                                            Transmembrane     15    31    Psort
                                            Transmembrane     68    84    Psort
                                            Transmembrane     99    115   Psort
                                            Transmembrane     151   167   Psort
                                            Transmembrane     201   217   Psort
                                            Transmembrane     253   269   Psort

FN1799    spermidine/putrescine ABC         Uncleavable N-    1     29    Psort
          transporter, permease protein     term signal seq
                                            Transmembrane     16    32    Psort
                                            Transmembrane     71    87    Psort
                                            Transmembrane     111   127   Psort
                                            Transmembrane     138   154   Psort
                                            Transmembrane     183   199   Psort
                                            Transmembrane     236   252   Psort

FN1800    peptidyl-prolyl cis-trans         Uncleavable N-    1     22    Psort
          isomerase                         term signal seq
                                            Transmembrane     4     20    Psort

FN1801    sodium/glutamate symport carrier  Cleavable N-term  1     21    Psort
          protein (glutamate permease)      signal seq
                                            Transmembrane     45    61    Psort
                                            Transmembrane     81    97    Psort
                                            Transmembrane     101   117   Psort
                                            Transmembrane     168   184   Psort
                                            Transmembrane     231   247   Psort
                                            Transmembrane     288   304   Psort
                                            Transmembrane     315   331   Psort
                                            Transmembrane     380   396   Psort

FN1805    conserved hypothetical protein    Uncleavable N-    1     14    Psort
          (possible integral membrane       term signal seq
          protein)
                                            Transmembrane     16    32    Psort
                                            Transmembrane     53    69    Psort
                                            Transmembrane     78    94    Psort
                                            Transmembrane     105   121   Psort
                                            Transmembrane     138   154   Psort
                                            Transmembrane     203   219   Psort
                                            Transmembrane     236   252   Psort
                                            Transmembrane     263   279   Psort
                                            Transmembrane     286   302   Psort
                                            Transmembrane     323   339   Psort
                                            Transmembrane     365   381   Psort

FN1806    conserved hypothetical protein    Cleavable N-term  1     27    Psort
          (predicted integral membrane      signal seq
          protein)
                                            Transmembrane     62    78    Psort
                                            Transmembrane     115   131   Psort
                                            Transmembrane     139   155   Psort
                                            Transmembrane     169   185   Psort
                                            Transmembrane     199   215   Psort
                                            Transmembrane     230   246   Psort
                                            Transmembrane     257   273   Psort

FN1807    conserved hypothetical protein    Cleavable N-term  1     19    Psort
                                            signal seq

FN1810    cation ABC transporter, permease  Transmembrane     25    41    Psort
          protein
                                            Transmembrane     59    75    Psort
                                            Transmembrane     80    96    Psort
                                            Transmembrane     111   127   Psort
                                            Transmembrane     154   170   Psort
                                            Transmembrane     198   214   Psort
                                            Transmembrane     217   233   Psort
                                            Transmembrane     244   260   Psort
                                            Transmembrane     270   286   Psort

FN1812    cation ABC transporter,           Cleavable N-term  1     19    Psort
          periplasmic cation-binding        signal seq
          protein

FN1813    cation ABC transporter,           Uncleavable N-    1     58    Psort
          periplasmic cation-binding        term signal seq
          protein
                                            Transmembrane     4     20    Psort

FN1814    conserved hypothetical protein    Cleavable N-term  1     35    Psort
                                            signal seq

FN1817    hemolysin/hemagglutinin-like      Uncleavable N-    1     24    Psort
          protein                           term signal seq
                                            Transmembrane     9     25    Psort

FN1819    ABC transporter, ATP-binding      Transmembrane     28    44    Psort
          protein
                                            Transmembrane     57    73    Psort
                                            Transmembrane     139   155   Psort
                                            Transmembrane     160   176   Psort
                                            Transmembrane     242   258   Psort
                                            Transmembrane     270   286   Psort

FN1820    ABC transporter, ATP-binding      Transmembrane     31    47    Psort
          protein
                                            Transmembrane     154   170   Psort
                                            Transmembrane     175   191   Psort
                                            Transmembrane     268   284   Psort
                                            Transmembrane     287   303   Psort

FN1824    manganese-dependent inorganic     Transmembrane     478   494   Psort
          pyrophosphatase

FN1825    Fusobacterium-specific protein,   Cleavable N-term  1     16    Psort
          uncharacterized                   signal seq

FN1826    collagenase family protease       Transmembrane     91    107   Psort

FN1829    Fusobacterium-specific protein,   Cleavable N-term  1     59    Psort
          uncharacterized                   signal seq
                                            Transmembrane     63    79    Psort
                                            Transmembrane     95    111   Psort
                                            Transmembrane     159   175   Psort
                                            Transmembrane     250   266   Psort

FN1834    MotA/TolQ/ExbB proton channel     Transmembrane     143   159   Psort
          family protein

FN1835    Fusobacterium-specific protein,   Cleavable N-term  1     14    Psort
          uncharacterized                   signal seq

FN1836    conserved hypothetical protein    Cleavable N-term  1     18    Psort
          (predicted TPR protein)           signal seq

FN1837    conserved hypothetical protein    Uncleavable N-    1     16    Psort
                                            term signal seq
                                            Transmembrane     4     20    Psort

FN1838    glycerol uptake facilitator       Transmembrane     15    31    Psort
          protein
                                            Transmembrane     95    111   Psort
                                            Transmembrane     149   165   Psort
                                            Transmembrane     177   193   Psort
                                            Transmembrane     230   246   Psort

FN1840    dihydroxyacetone kinase           Transmembrane     260   276   Psort

FN1843    surface antigen  BspA             Transmembrane     222   238   Psort

FN1844    probable short-chain              Transmembrane     236   252   Psort
          dehydrogenase

FN1845    conserved hypothetical protein    Uncleavable N-    1     20    Psort
          (predicted ceramide               term signal seq
          glucosyltransferase )
                                            Transmembrane     3     19    Psort
                                            Transmembrane     278   294   Psort
                                            Transmembrane     303   319   Psort
                                            Transmembrane     347   363   Psort

FN1849    coenzyme F390 synthetase          Uncleavable N-    1     20    Psort
                                            term signal seq

FN1850    3-oxoacyl-(acyl-carrier-protein)  Transmembrane     290   306   Psort
          synthase III

FN1852    Fusobacterium-specific protein,   Uncleavable N-    1     13    Psort
          uncharacterized                   term signal seq

FN1853    methylaspartate mutase, S chain   Uncleavable N-    1     57    Psort
                                            term signal seq

FN1854    glutamate mutase L (mutL)         Transmembrane     70    86    Psort

FN1856    acetoacetate:butyrate/acetate     Transmembrane     164   180   Psort
          CoA-transferase, beta subunit

FN1857    acetate CoA-transferase, alpha    Transmembrane     177   193   Psort
          subunit

FN1858    short-chain fatty acids           Transmembrane     31    47    Psort
          transporter
                                            Transmembrane     62    78    Psort
                                            Transmembrane     106   122   Psort
                                            Transmembrane     202   218   Psort
                                            Transmembrane     259   275   Psort
                                            Transmembrane     282   298   Psort
                                            Transmembrane     318   334   Psort
                                            Transmembrane     359   375   Psort
                                            Transmembrane     441   457   Psort

FN1859    major outer membrane protein      Cleavable N-term  1     20    Psort
          FomA (40 kDa)                     signal seq

FN1860    Na+/H+ antiporter (NhaC)          Transmembrane     21    37    Psort
                                            Transmembrane     67    83    Psort
                                            Transmembrane     105   121   Psort
                                            Transmembrane     124   140   Psort
                                            Transmembrane     143   159   Psort
                                            Transmembrane     227   243   Psort
                                            Transmembrane     289   305   Psort
                                            Transmembrane     311   327   Psort
                                            Transmembrane     350   366   Psort
                                            Transmembrane     467   483   Psort
                                            Transmembrane     488   504   Psort

FN1861    amino acid transport protein,     Uncleavable N-    1     52    Psort
          LysE family                       term signal seq
                                            Transmembrane     37    53    Psort
                                            Transmembrane     69    85    Psort
                                            Transmembrane     152   168   Psort
                                            Transmembrane     175   191   Psort

FN1864    DNA mismatch repair protein       Transmembrane     315   331   Psort
          (MutS)

FN1868    conserved hypothetical protein    Uncleavable N-    1     43    Psort
                                            term signal seq

FN1870    Fusobacterium-specific protein,   Transmembrane     110   126   Psort
          uncharacterized
                                            Transmembrane     159   175   Psort
                                            Transmembrane     187   203   Psort
                                            Transmembrane     211   227   Psort

FN1873    HIT family hydrolase              Transmembrane     25    41    Psort

FN1874    ribose 5-phosphate isomerase      Transmembrane     59    75    Psort
                                            Transmembrane     104   120   Psort

FN1876    4-methyl-5(beta-hydroxyethyl)-    Transmembrane     111   127   Psort
          thiazole monophosphate synthesis
          protein

FN1877    xanthine/uracil permease family   Transmembrane     61    77    Psort
          protein
                                            Transmembrane     84    100   Psort
                                            Transmembrane     113   129   Psort
                                            Transmembrane     149   165   Psort
                                            Transmembrane     180   196   Psort
                                            Transmembrane     205   221   Psort
                                            Transmembrane     256   272   Psort
                                            Transmembrane     336   352   Psort
                                            Transmembrane     384   400   Psort
                                            Transmembrane     426   442   Psort

FN1880    nitroreductase family protein;    Transmembrane     110   126   Psort
          predicted oxygen-insensitive
          NAD(P)H nitroreductase

FN1882    hypothetical protein              Transmembrane     27    43    Psort

FN1883    transposase                       Transmembrane     267   283   Psort

FN1885    hemolysin III                     Transmembrane     20    36    Psort
                                            Transmembrane     49    65    Psort
                                            Transmembrane     87    103   Psort
                                            Transmembrane     108   124   Psort
                                            Transmembrane     136   152   Psort
                                            Transmembrane     162   178   Psort
                                            Transmembrane     196   212   Psort

FN1886    hypothetical protein              Cleavable N-term  1     18    Psort
                                            signal seq

FN1895    Fusobacterium-specific protein,   Uncleavable N-    1     18    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     7     23    Psort

FN1896    predicted ABC transporter         Uncleavable N-    1     41    Psort
          permease, integral membrane       term signal seq
          protein
                                            Transmembrane     28    44    Psort
                                            Transmembrane     46    62    Psort
                                            Transmembrane     72    88    Psort
                                            Transmembrane     170   186   Psort
                                            Transmembrane     219   235   Psort
                                            Transmembrane     252   268   Psort
                                            Transmembrane     272   288   Psort
                                            Transmembrane     305   321   Psort

FN1897    predicted ABC transporter,        Cleavable N-term  1     59    Psort
          integral membrane protein         signal seq
                                            Transmembrane     87    103   Psort
                                            Transmembrane     125   141   Psort
                                            Transmembrane     184   200   Psort
                                            Transmembrane     232   248   Psort
                                            Transmembrane     259   275   Psort
                                            Transmembrane     282   298   Psort

FN1899    predicted lipoprotein             Cleavable N-term  1     21    Psort
                                            signal seq

FN1900    regulatory protein                Cleavable N-term  1     50    Psort
                                            signal seq
                                            Transmembrane     53    69    Psort
                                            Transmembrane     119   135   Psort
                                            Transmembrane     138   154   Psort
                                            Transmembrane     163   179   Psort
                                            Transmembrane     185   201   Psort
                                            Transmembrane     244   260   Psort
                                            Transmembrane     297   313   Psort

FN1903    pyridine nucleotide-disulphide    Cleavable N-term  1     16    Psort
          oxidoreductase                    signal seq

FN1904    transcriptional regulator, MarR   Uncleavable N-    1     15    Psort
          family                            term signal seq

FN1908    glycerophosphodiester             Cleavable N-term  1     20    Psort
          phosphodiesterase                 signal seq

FN1910    predicted outer membrane protein  Cleavable N-term  1     18    Psort
                                            signal seq

FN1924    arsenical pump membrane protein   Cleavable N-term  1     36    Psort
                                            signal seq
                                            Transmembrane     54    70    Psort
                                            Transmembrane     94    110   Psort
                                            Transmembrane     115   131   Psort
                                            Transmembrane     177   193   Psort
                                            Transmembrane     228   244   Psort
                                            Transmembrane     247   263   Psort
                                            Transmembrane     279   295   Psort
                                            Transmembrane     315   331   Psort

FN1925    arsenical pump membrane protein   Uncleavable N-    1     26    Psort
                                            term signal seq
                                            Transmembrane     2     18    Psort
                                            Transmembrane     53    69    Psort
                                            Transmembrane     93    109   Psort
                                            Transmembrane     114   130   Psort
                                            Transmembrane     178   194   Psort
                                            Transmembrane     227   243   Psort
                                            Transmembrane     246   262   Psort
                                            Transmembrane     278   294   Psort
                                            Transmembrane     315   331   Psort
                                            Transmembrane     403   419   Psort

FN1930    phosphatidylglycerophosphatase A  Transmembrane     38    54    Psort
                                            Transmembrane     58    74    Psort
                                            Transmembrane     89    105   Psort
                                            Transmembrane     108   124   Psort
                                            Transmembrane     147   163   Psort

FN1932    dephospho-CoA kinase              Uncleavable N-    1     15    Psort
                                            term signal seq

FN1933    Fusobacterium-specific protein,   Uncleavable N-    1     42    Psort
          uncharacterized                   term signal seq

FN1934    Fusobacterium-specific protein,   Transmembrane     86    102   Psort
          uncharacterized
                                            Transmembrane     129   145   Psort
                                            Transmembrane     159   175   Psort
                                            Transmembrane     185   201   Psort
                                            Transmembrane     207   223   Psort
                                            Transmembrane     247   263   Psort
                                            Transmembrane     276   292   Psort

FN1938    Fusobacterium-specific protein,   Cleavable N-term  1     19    Psort
          uncharacterized                   signal seq
                                            Transmembrane     132   148   Psort

FN1940    Na+ driven multidrug efflux pump  Uncleavable N-    1     35    Psort
                                            term signal seq
                                            Transmembrane     59    75    Psort
                                            Transmembrane     97    113   Psort
                                            Transmembrane     166   182   Psort
                                            Transmembrane     193   209   Psort
                                            Transmembrane     255   271   Psort
                                            Transmembrane     317   333   Psort
                                            Transmembrane     355   371   Psort
                                            Transmembrane     404   420   Psort

FN1944    sodium- and chloride-dependent    Transmembrane     55    71    Psort
          transporter, possible tyrosine
          transporter
                                            Transmembrane     112   128   Psort
                                            Transmembrane     171   187   Psort
                                            Transmembrane     198   214   Psort
                                            Transmembrane     277   293   Psort
                                            Transmembrane     327   343   Psort
                                            Transmembrane     369   385   Psort
                                            Transmembrane     391   407   Psort
                                            Transmembrane     442   458   Psort

FN1948    Fusobacterium-specific protein,   Transmembrane     84    100   Psort
          uncharacterized

FN1952    predicted Na(+)-linked D-alanine  Uncleavable N-    1     22    Psort
          glycine permease                  term signal seq
                                            Transmembrane     3     19    Psort

FN1953    sodium/alanine symporter family   Uncleavable N-    1     59    Psort
                                            term signal seq
                                            Transmembrane     18    34    Psort

FN1955    hypothetical protein              Uncleavable N-    1     30    Psort
                                            term signal seq
                                            Transmembrane     12    28    Psort
                                            Transmembrane     45    61    Psort

FN1969    ABC-type cobalamin/Fe3+-          Uncleavable N-    1     30    Psort
          siderophores transport system,    term signal seq
          permease component
                                            Transmembrane     9     25    Psort
                                            Transmembrane     67    83    Psort
                                            Transmembrane     96    112   Psort
                                            Transmembrane     123   139   Psort
                                            Transmembrane     152   168   Psort
                                            Transmembrane     200   216   Psort
                                            Transmembrane     245   261   Psort
                                            Transmembrane     316   332   Psort

FN1971    probable hemin receptor, outer    Cleavable N-term  1     20    Psort
          membrane protein                  signal seq

FN1972    Fusobacterium-specific protein,   Uncleavable N-    1     22    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     6     22    Psort

FN1974    DNA/RNA helicase (superfamily     Transmembrane     50    66    Psort
          II)

FN1976    conserved hypothetical protein    Uncleavable N-    1     24    Psort
          (probable 4-amino-4-              term signal seq
          deoxychorismate lyase)
                                            Transmembrane     4     20    Psort

FN1978    ATP-dependent Zn proteases (cell  Transmembrane     95    111   Psort
          division protein FtsH)
                                            Transmembrane     220   236   Psort

FN1980    probable integral membrane        Cleavable N-term  1     19    Psort
          protein                           signal seq
                                            Transmembrane     121   137   Psort
                                            Transmembrane     145   161   Psort
                                            Transmembrane     171   187   Psort
                                            Transmembrane     197   213   Psort
                                            Transmembrane     251   267   Psort
                                            Transmembrane     303   319   Psort
                                            Transmembrane     349   365   Psort

FN1981    conserved hypothetical protein    Transmembrane     85    101   Psort
          (possible transposase)

FN1984    thioredoxin reductase;            Transmembrane     146   162   Psort
          glutathione-related protein

FN1985    inner membrane protein            Uncleavable N-    1     59    Psort
                                            term signal seq
                                            Transmembrane     4     20    Psort
                                            Transmembrane     320   336   Psort
                                            Transmembrane     347   363   Psort
                                            Transmembrane     367   383   Psort
                                            Transmembrane     399   415   Psort
                                            Transmembrane     422   438   Psort

FN1989    sodium-dependent tyrosine         Cleavable N-term  1     60    Psort
          transporter (SNF family)          signal seq
                                            Transmembrane     96    112   Psort
                                            Transmembrane     145   161   Psort
                                            Transmembrane     177   193   Psort
                                            Transmembrane     261   277   Psort
                                            Transmembrane     305   321   Psort
                                            Transmembrane     342   358   Psort
                                            Transmembrane     370   386   Psort
                                            Transmembrane     418   434   Psort

FN1990    TPR family protein/heat shock     Uncleavable N-    1     51    Psort
          protein                           term signal seq

FN1996    conserved hypothetical protein    Cleavable N-term  1     22    Psort
          (possible transporter, yhhQ       signal seq
          family)
                                            Transmembrane     37    53    Psort
                                            Transmembrane     89    105   Psort
                                            Transmembrane     125   141   Psort
                                            Transmembrane     198   214   Psort

FN1997    predicted transcriptional         Transmembrane     66    82    Psort
          regulator

FN1999    conserved hypothetical protein    Cleavable N-term  1     48    Psort
          (possible HIPA protein)           signal seq

FN2001    conserved hypothetical protein    Cleavable N-term  1     27    Psort
          (possible membrane protein)       signal seq

FN2002    predicted permease                Cleavable N-term  1     46    Psort
                                            signal seq
                                            Transmembrane     67    83    Psort
                                            Transmembrane     105   121   Psort
                                            Transmembrane     140   156   Psort
                                            Transmembrane     163   179   Psort
                                            Transmembrane     189   205   Psort
                                            Transmembrane     217   233   Psort
                                            Transmembrane     254   270   Psort
                                            Transmembrane     283   299   Psort
                                            Transmembrane     309   325   Psort
                                            Transmembrane     334   350   Psort
                                            Transmembrane     357   373   Psort
                                            Transmembrane     381   397   Psort
                                            Transmembrane     451   467   Psort
                                            Transmembrane     474   490   Psort
                                            Transmembrane     493   509   Psort
                                            Transmembrane     516   532   Psort
                                            Transmembrane     543   559   Psort

FN2003    biotin biosynthesis protein       Uncleavable N-    1     13    Psort
          (bioY family protein)             term signal seq
                                            Transmembrane     6     22    Psort
                                            Transmembrane     55    71    Psort
                                            Transmembrane     87    103   Psort
                                            Transmembrane     116   132   Psort
                                            Transmembrane     152   168   Psort

FN2004    cobalt ABC transporter, ATP-      Transmembrane     144   160   Psort
          binding protein

FN2005    cobalt ABC transporter, ATP-      Transmembrane     139   155   Psort
          binding protein

FN2006    ABC-type cobalt transport         Transmembrane     22    38    Psort
          system, permease component
                                            Transmembrane     40    56    Psort
                                            Transmembrane     68    84    Psort
                                            Transmembrane     111   127   Psort
                                            Transmembrane     201   217   Psort
                                            Transmembrane     248   264   Psort

FN2009    glycine                           Transmembrane     29    45    Psort
          betaine/carnitine/choline
          transport system permease
          protein (osmoprotection protein)
                                            Transmembrane     61    77    Psort
                                            Transmembrane     82    98    Psort
                                            Transmembrane     127   143   Psort
                                            Transmembrane     151   167   Psort
                                            Transmembrane     186   202   Psort
                                            Transmembrane     220   236   Psort

FN2011    valyl-tRNA synthetase             Transmembrane     485   501   Psort

FN2014    ATP-dependent protease La (Lon    Uncleavable N-    1     38    Psort
          protease)                         term signal seq

FN2018    single-stranded-DNA-specific      Transmembrane     206   222   Psort
          exonuclease
                                            Transmembrane     351   367   Psort

FN2022    N utilization substance protein   Transmembrane     289   305   Psort
          A (transcription termination-
          antitermination factor)

FN2029    lipopolysaccharide modification   Uncleavable N-    1     49    Psort
          acyltransferase (O-antigen        term signal seq
          acetylase)
                                            Transmembrane     8     24    Psort
                                            Transmembrane     35    51    Psort
                                            Transmembrane     70    86    Psort
                                            Transmembrane     135   151   Psort
                                            Transmembrane     161   177   Psort
                                            Transmembrane     223   239   Psort
                                            Transmembrane     250   266   Psort
                                            Transmembrane     315   331   Psort
                                            Transmembrane     343   359   Psort

FN2030    vacuolar-type H+-pyrophosphatase  Cleavable N-term  1     54    Psort
                                            signal seq
                                            Transmembrane     60    76    Psort
                                            Transmembrane     78    94    Psort
                                            Transmembrane     134   150   Psort
                                            Transmembrane     233   249   Psort
                                            Transmembrane     256   272   Psort
                                            Transmembrane     295   311   Psort
                                            Transmembrane     315   331   Psort
                                            Transmembrane     371   387   Psort
                                            Transmembrane     395   411   Psort
                                            Transmembrane     455   471   Psort
                                            Transmembrane     493   509   Psort
                                            Transmembrane     560   576   Psort
                                            Transmembrane     585   601   Psort
                                            Transmembrane     651   667   Psort

FN2042    predicted preprotein              Transmembrane     32    48    Psort
          translocase, SecE subunit

FN2046    predicted acetyltransferase       Transmembrane     32    48    Psort

FN2049    hypothetical protein              May be a                      Psort
                                            lipotein (signal

FN2050    Fusobacterium-specific protein,   Cleavable N-term  1     13    Psort
          predicted membrane-spanning       signal seq
          protein

FN2051    hypothetical protein              Cleavable N-term  1     20    Psort
                                            signal seq

FN2053    sodium:dicarboxylate symporter    Cleavable N-term  1     38    Psort
                                            signal seq
                                            Transmembrane     42    58    Psort
                                            Transmembrane     71    87    Psort
                                            Transmembrane     130   146   Psort
                                            Transmembrane     170   186   Psort
                                            Transmembrane     195   211   Psort
                                            Transmembrane     286   302   Psort
                                            Transmembrane     310   326   Psort
                                            Transmembrane     333   349   Psort

FN2054    glucose-6-phosphate isomerase     Transmembrane     76    92    Psort
                                            Transmembrane     207   223   Psort

FN2060    hypothetical protein              May be a                      Psort
                                            lipotein (signal

FN2061    Fusobacterium-specific protein,   Cleavable N-term  1     13    Psort
          predicted membrane-spanning       signal seq
          protein

FN2062    hypothetical protein              Cleavable N-term  1     20    Psort
                                            signal seq

FN2069    sodium/proton-dependent alanine   Uncleavable N-    1     38    Psort
          carrier protein; symporter        term signal seq
                                            Transmembrane     14    30    Psort
                                            Transmembrane     80    96    Psort
                                            Transmembrane     145   161   Psort
                                            Transmembrane     190   206   Psort
                                            Transmembrane     220   236   Psort
                                            Transmembrane     310   326   Psort
                                            Transmembrane     357   373   Psort
                                            Transmembrane     391   407   Psort
                                            Transmembrane     419   435   Psort

FN2070    cobyric acid synthase             Transmembrane     163   179   Psort

FN2071    hypothetical protein              Transmembrane     23    39    Psort
                                            Transmembrane     57    73    Psort

FN2072    guanine-hypoxanthine permease     Cleavable N-term  1     41    Psort
                                            signal seq
                                            Transmembrane     76    92    Psort
                                            Transmembrane     129   145   Psort
                                            Transmembrane     153   169   Psort
                                            Transmembrane     191   207   Psort
                                            Transmembrane     265   281   Psort
                                            Transmembrane     296   312   Psort
                                            Transmembrane     338   354   Psort

FN2077    Na+/H+ antiporter (NhaC)          Uncleavable N-    1     33    Psort
                                            term signal seq
                                            Transmembrane     11    27    Psort
                                            Transmembrane     38    54    Psort
                                            Transmembrane     78    94    Psort
                                            Transmembrane     110   126   Psort
                                            Transmembrane     143   159   Psort
                                            Transmembrane     196   212   Psort
                                            Transmembrane     241   257   Psort
                                            Transmembrane     310   326   Psort
                                            Transmembrane     353   369   Psort
                                            Transmembrane     439   455   Psort

FN2080    ABC transporter, membrane-        Uncleavable N-    1     18    Psort
          spanning permease                 term signal seq
                                            Transmembrane     10    26    Psort
                                            Transmembrane     59    75    Psort
                                            Transmembrane     81    97    Psort
                                            Transmembrane     121   137   Psort
                                            Transmembrane     173   189   Psort
                                            Transmembrane     197   213   Psort
                                            Transmembrane     229   245   Psort
                                            Transmembrane     252   268   Psort

FN2082    formate--tetrahydrofolate ligase  Transmembrane     503   519   Psort
          (10-formyltetrahydrofolate
          synthase)

FN2084    conserved hypothetical protein    Transmembrane     22    38    Psort
          (predicted membrane premease)
                                            Transmembrane     74    90    Psort
                                            Transmembrane     105   121   Psort
                                            Transmembrane     187   203   Psort
                                            Transmembrane     211   227   Psort

FN2085    conserved hypothetical protein    Cleavable N-term  1     23    Psort
          (possible exported protein)       signal seq

FN2088    Fusobacterium-specific protein,   Transmembrane     239   255   Psort
          uncharacterized

FN2089    Fusobacterium-specific protein,   Uncleavable N-    1     18    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     6     22    Psort

FN2090    Fusobacterium-specific protein,   Uncleavable N-    1     34    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     18    34    Psort

FN2091    Fusobacterium-specific protein,   Uncleavable N-    1     50    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     2     18    Psort

FN2092    Fusobacterium-specific protein,   Uncleavable N-    1     38    Psort
          predicted integral membrane       term signal seq
          protein
                                            Transmembrane     5     21    Psort
                                            Transmembrane     28    44    Psort
                                            Transmembrane     49    65    Psort
                                            Transmembrane     84    100   Psort
                                            Transmembrane     108   124   Psort
                                            Transmembrane     136   152   Psort

FN2093    predicted general secretion       Cleavable N-term  1     29    Psort
          pathway protein G                 signal seq

FN2094    general secretion pathway         Transmembrane     115   131   Psort
          protein F
                                            Transmembrane     164   180   Psort
                                            Transmembrane     219   235   Psort
                                            Transmembrane     317   333   Psort

FN2095    general secretion pathway         Transmembrane     292   308   Psort
          protein E

FN2096    Fusobacterium-specific protein,   Uncleavable N-    1     27    Psort
          uncharacterized                   term signal seq
                                            Transmembrane     9     25    Psort

FN2099    conserved hypothetical protein    Uncleavable N-    1     46    Psort
                                            term signal seq
                                            Transmembrane     10    26    Psort
                                            Transmembrane     27    43    Psort
                                            Transmembrane     76    92    Psort
                                            Transmembrane     102   118   Psort

FN2101    transport system permease         Uncleavable N-    1     26    Psort
          protein (possible membrane        term signal seq
          protein duf6)
                                            Transmembrane     40    56    Psort
                                            Transmembrane     103   119   Psort
                                            Transmembrane     132   148   Psort
                                            Transmembrane     160   176   Psort
                                            Transmembrane     189   205   Psort
                                            Transmembrane     221   237   Psort
                                            Transmembrane     252   268   Psort
                                            Transmembrane     275   291   Psort

FN2104    Fusobacterium-specific protein,   Cleavable N-term  1     49    Psort
          predicted tricarboxylate          signal seq
          transport membrane protein
                                            Transmembrane     78    94    Psort
                                            Transmembrane     95    111   Psort
                                            Transmembrane     118   134   Psort

FN2105    tricarboxylate transport          Cleavable N-term  1     51    Psort
          membrane protein                  signal seq
                                            Transmembrane     63    79    Psort
                                            Transmembrane     111   127   Psort
                                            Transmembrane     163   179   Psort
                                            Transmembrane     194   210   Psort
                                            Transmembrane     260   276   Psort
                                            Transmembrane     356   372   Psort
                                            Transmembrane     388   404   Psort
                                            Transmembrane     408   424   Psort
                                            Transmembrane     427   443   Psort
                                            Transmembrane     470   486   Psort

FN2106    arginine/ornithine antiporter     Transmembrane     29    45    Psort
                                            Transmembrane     133   149   Psort
                                            Transmembrane     172   188   Psort
                                            Transmembrane     200   216   Psort
                                            Transmembrane     252   268   Psort
                                            Transmembrane     315   331   Psort
                                            Transmembrane     342   358   Psort
                                            Transmembrane     374   390   Psort
                                            Transmembrane     415   431   Psort
                                            Transmembrane     497   513   Psort

FN2111    predicted exported 24-amino acid  Cleavable N-term  1     18    Psort
          repeat protein                    signal seq

FN2112    hypothetical protein              Uncleavable N-    1     17    Psort
                                            term signal seq

FN2114    hypothetical protein              Cleavable N-term  1     18    Psort
                                            signal seq

FN2115    hypothetical protein              Cleavable N-term  1     13    Psort
                                            signal seq

FN2116    predicted exported 24-amino acid  Cleavable N-term  1     18    Psort
          repeat protein                    signal seq

FN2117    predicted exported 24-amino acid  Cleavable N-term  1     18    Psort
          repeat protein                    signal seq

FN2118    predicted  24-amino acid repeat   Cleavable N-term  1     18    Psort
          protein                           signal seq

FN2119    probable phophatidylinositol-4-   Cleavable N-term  1     18    Psort
          phosphate 5-kinase                signal seq

FN2120    predicted exported 24-amino acid  Cleavable N-term  1     18    Psort
          repeat protein                    signal seq

FN2125    DNA gyrase subunit A              Transmembrane     162   178   Psort

FNp4      hypothetical protein taken from   Transmembrane     170   186   Psort
          plasmids pFN1 and pPA52 from
          F.nucleatum

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