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Secondary Structure Features for null

Structural features are tabluated below. If a gene has a predicted feature, it appears in the table with its definition, feature type, the start and stop of the feature relative to the first amino acid and the method used to predict the feature. When the PSORT method is used, a signal peptide with a good cleavage site is noted as cleavable and a signal peptide with a bad cleavage site is noted as uncleavable.



Gene ID   Definition                       Structural Feature Start  Stop  Method
--------- -------------------------------- ------------------ -----  ----- -----------
PG0002    acetyltransferase/hexapeptide     transmembrane     111   128   Phd
          transferase
                                            transmembrane     111   127   Psort

PG0003    probable transmembrane protein    uncleavable       1     28    Psort
                                            signal
                                            transmembrane     8     24    Psort
                                            transmembrane     50    66    Psort
                                            transmembrane     84    100   Psort
                                            transmembrane     122   138   Psort
                                            non-globular      156   201   SEG
                                            transmembrane     157   173   Psort
                                            transmembrane     243   259   Psort
                                            transmembrane     281   297   Psort
                                            transmembrane     313   329   Psort

PG0004    probable                          cleavable signal  1     18    Psort
          phosphoribosyltransferase
          transcriptional regulator
                                            gram negative     1     18    SignalP
                                            signal
                                            transmembrane     169   185   Psort

PG0005    integral membrane protein;        transmembrane     3     19    Psort
          phosphoesterase/phosphohydrolase
                                            transmembrane     36    52    Psort
                                            transmembrane     37    54    Phd
                                            transmembrane     63    87    Phd
                                            transmembrane     73    89    Psort
                                            transmembrane     113   129   Psort
                                            transmembrane     116   133   Phd
                                            coil-coil         207   242   Coils
                                            transmembrane     354   371   Phd

PG0006    probable integral membrane        transmembrane     39    55    Psort
          protein
                                            transmembrane     83    99    Psort
                                            transmembrane     153   169   Psort
                                            transmembrane     180   196   Psort
                                            transmembrane     217   233   Psort
                                            transmembrane     267   283   Psort
                                            transmembrane     310   326   Psort
                                            non-globular      314   442   SEG
                                            transmembrane     387   403   Psort
                                            transmembrane     411   427   Psort

PG0008    ISPg5-related orf-1               coil-coil         79    110   Coils

PG0009    CLP protease ATP-binding subunit  transmembrane     22    38    Psort
          (CLPA/CLPB/CLPC)
                                            non-globular      127   231   SEG
                                            coil-coil         463   520   Coils

PG0010    beta-N-acetylglucosaminidase;     cleavable signal  1     21    Psort
          beta lactamase
                                            non-globular      512   569   SEG
                                            transmembrane     650   666   Psort

PG0011    histidinol-phosphate              transmembrane     75    92    Phd
          aminotransferase
                                            transmembrane     194   211   Phd
                                            transmembrane     225   244   Phd

PG0012    2-phosphosulfolactate             transmembrane     35    52    Phd
          phosphatase
                                            transmembrane     108   124   Psort
                                            transmembrane     113   130   Phd

PG0013    nitrogen assimilation regulatory  non-globular      1     75    SEG
          protein NR-I (ntrC)

PG0014    two-component sensor histidine    cleavable signal  1     29    Psort
          kinase
                                            transmembrane     16    40    Phd
                                            transmembrane     33    49    Psort
                                            transmembrane     112   128   Psort
                                            transmembrane     119   136   Phd

PG0015    conserved hypothetical protein    cleavable signal  1     17    Psort

PG0016    ISPg4 transposase                 uncleavable       1     51    Psort
                                            signal
                                            transmembrane     283   300   Phd
                                            transmembrane     321   337   Psort
                                            transmembrane     324   341   Phd

PG0019    sulfate transporter               non-globular      1     162   SEG
                                            transmembrane     30    46    Psort
                                            transmembrane     54    70    Psort
                                            transmembrane     75    91    Psort
                                            transmembrane     98    114   Psort
                                            transmembrane     124   140   Psort
                                            transmembrane     176   192   Psort
                                            transmembrane     202   218   Psort
                                            transmembrane     258   274   Psort
                                            non-globular      275   439   SEG
                                            transmembrane     289   305   Psort
                                            transmembrane     326   342   Psort
                                            transmembrane     345   361   Psort
                                            transmembrane     380   396   Psort
                                            transmembrane     397   413   Psort

PG0019.1  hypothetical protein              transmembrane     26    42    Psort

PG0020    conserved hypothetical protein    non-globular      1     114   SEG
          (possible DNA binding protein)

PG0023    probable integral outer membrane  cleavable signal  1     26    Psort
          protein P40
                                            gram negative     1     26    SignalP
                                            signal

PG0024    2-C-methyl-D-erythritol 2,4-      transmembrane     42    58    Psort
          cyclodiphosphate synthase

PG0025    RNA methylase SpoU family         transmembrane     212   228   Psort

PG0028    beta-mannosidase (mannanase)      cleavable signal  1     25    Psort

PG0029    conserved hypothetical protein    uncleavable       1     13    Psort
                                            signal
                                            transmembrane     5     21    Psort
                                            coil-coil         22    77    Coils
                                            coil-coil         123   168   Coils
                                            coil-coil         252   280   Coils
                                            coil-coil         331   398   Coils

PG0031    DNA polymerase III alpha subunit  coil-coil         66    106   Coils

PG0033    ISPg5-related orf-1               coil-coil         79    110   Coils

PG0036    beta-N-acetylglucosaminidase      may be a                      Psort
                                            lipoprotein
                                            gram negative     1     23    SignalP
                                            signal

PG0038    heat shock protein, HSP90 family  coil-coil         80    112   Coils
                                            coil-coil         589   637   Coils
                                            transmembrane     653   669   Psort

PG0040    phosphatidate                     transmembrane     12    36    Phd
          cytidylytransferase (CDP
          diglyceride synthetase) (CDP-
          diglyceride pyrophosphorylase)
          (CDP-diacylglycerol synthase)
          (CDS) CTP:phosphatidate
          cytidylyltransferase) (CDP-DAG
          synthase) (CDP-DG synthetase)
                                            transmembrane     67    91    Phd
                                            transmembrane     118   135   Phd
                                            transmembrane     132   148   Psort
                                            transmembrane     150   166   Psort
                                            transmembrane     153   176   Phd
                                            transmembrane     183   199   Psort
                                            transmembrane     193   210   Phd
                                            transmembrane     206   222   Psort
                                            transmembrane     218   235   Phd
                                            transmembrane     242   258   Psort
                                            transmembrane     267   284   Phd
                                            transmembrane     279   295   Psort
                                            transmembrane     317   333   Psort
                                            transmembrane     345   361   Psort
                                            transmembrane     392   408   Psort

PG0041    ATPase/cell division              transmembrane     18    35    Phd
          protein/ATP-dependent zinc
          metallopeptidase
                                            transmembrane     19    35    Psort
                                            transmembrane     135   151   Psort
                                            transmembrane     138   155   Phd
                                            coil-coil         591   621   Coils
                                            non-globular      636   673   SEG

PG0042    conserved GTP-binding protein     coil-coil         123   179   Coils
                                            coil-coil         222   263   Coils

PG0043    ISPg4 transposase                 uncleavable       1     51    Psort
                                            signal
                                            transmembrane     283   300   Phd
                                            transmembrane     321   337   Psort
                                            transmembrane     324   341   Phd

PG0044    ISPg1 transposase fragment        non-globular      66    112   SEG
          (IS1106-related transposase)
                                            coil-coil         182   211   Coils

PG0045    histidine kinase sensor protein   cleavable signal  1     27    Psort
                                            transmembrane     18    35    Phd
                                            transmembrane     153   170   Phd
                                            transmembrane     156   172   Psort
                                            transmembrane     279   296   Phd

PG0046    single-strand DNA-specific        transmembrane     224   240   Psort
          exonuclease
                                            coil-coil         316   343   Coils

PG0047    possible stress-related           transmembrane     133   150   Phd
          transcriptional regulator
                                            transmembrane     155   179   Phd
                                            transmembrane     155   171   Psort
                                            transmembrane     229   253   Phd
                                            transmembrane     233   249   Psort
                                            transmembrane     272   295   Phd
                                            transmembrane     283   299   Psort
                                            transmembrane     316   338   Phd
                                            transmembrane     320   336   Psort

PG0048    conserved hypothetical protein    transmembrane     34    50    Psort
                                            coil-coil         281   308   Coils
                                            non-globular      309   409   SEG
                                            transmembrane     375   391   Psort
                                            transmembrane     392   408   Psort
                                            coil-coil         410   440   Coils
                                            transmembrane     505   521   Psort

PG0051    hypothetical protein              transmembrane     107   123   Psort
                                            transmembrane     108   125   Phd

PG0052    YngK-related conserved            uncleavable       1     24    Psort
          hypothetical protein              signal
                                            transmembrane     9     25    Psort

PG0053    helicase-related protein          coil-coil         516   550   Coils
                                            coil-coil         616   663   Coils

PG0054    possible alkaline protease        cleavable signal  1     19    Psort
          secretion protein
                                            gram negative     1     19    SignalP
                                            signal
                                            coil-coil         135   186   Coils
                                            non-globular      218   282   SEG
                                            coil-coil         290   335   Coils

PG0055    cation efflux protein             cleavable signal  1     32    Psort
                                            non-globular      35    103   SEG
                                            transmembrane     341   357   Psort
                                            transmembrane     346   370   Phd
                                            transmembrane     362   378   Psort
                                            transmembrane     375   398   Phd
                                            transmembrane     392   408   Psort
                                            transmembrane     447   464   Phd
                                            transmembrane     450   466   Psort
                                            transmembrane     474   490   Psort
                                            transmembrane     475   493   Phd
                                            transmembrane     538   554   Psort
                                            transmembrane     540   557   Phd
                                            transmembrane     866   882   Psort
                                            transmembrane     867   884   Phd
                                            transmembrane     895   911   Psort
                                            transmembrane     900   924   Phd
                                            transmembrane     915   931   Psort
                                            transmembrane     967   983   Psort
                                            transmembrane     999   1015  Psort
                                            transmembrane     1003  1020  Phd

PG0056    conserved hypothetical protein    cleavable signal  1     37    Psort
          (possible membrane fusion
          protein) (possible cation efflux
          membrane fusion protein)
                                            coil-coil         72    120   Coils

PG0057    hypothetical protein              uncleavable       1     37    Psort
                                            signal
                                            transmembrane     7     23    Psort
                                            transmembrane     87    103   Psort

PG0058    conserved hypothetical protein    non-globular      229   305   SEG
          (possible sugar kinase)
                                            non-globular      405   504   SEG

PG0061    UDP-3-O-(R-3-hydoxymyristoyl)-    non-globular      100   186   SEG
          glucosamine-N-acyltransferase
                                            non-globular      243   349   SEG

PG0063    peptide chain release factor      coil-coil         36    99    Coils

PG0064    phosphoribosyl-aminoimidazole     transmembrane     117   133   Psort
          synthetase (AIRS)

PG0065    conserved hypothetical protein    cleavable signal  1     26    Psort
                                            gram negative     1     24    SignalP
                                            signal

PG0066    conserved hypothetical protein    coil-coil         1     32    Coils
                                            coil-coil         54    97    Coils

PG0067    possible abortive phage           non-globular      1     77    SEG
          resistance protein

PG0068    conserved hypothetical protein    non-globular      1     46    SEG

PG0069    conserved hypothetical protein    transmembrane     75    91    Psort
                                            transmembrane     215   231   Psort
                                            non-globular      297   345   SEG
                                            non-globular      441   652   SEG

PG0070    conserved hypothetical protein    may be a                      Psort
                                            lipoprotein

PG0071    hypothetical protein              cleavable signal  1     26    Psort
                                            gram negative     1     21    SignalP
                                            signal

PG0072    L-serine dehydratase              transmembrane     229   245   Psort
                                            non-globular      260   326   SEG

PG0074    DEAD BOX-related helicase         coil-coil         252   282   Coils
                                            coil-coil         415   457   Coils
                                            non-globular      509   604   SEG

PG0079    DNA-binding stress protein (Dps   coil-coil         52    79    Coils
          family)

PG0080    conserved hypothetical protein    uncleavable       1     44    Psort
                                            signal
                                            transmembrane     20    36    Psort
                                            transmembrane     179   195   Psort
                                            transmembrane     240   256   Psort
                                            transmembrane     271   287   Psort
                                            transmembrane     300   316   Psort
                                            transmembrane     361   377   Psort

PG0081    conserved hypothetical protein    cleavable signal  1     25    Psort
                                            transmembrane     183   199   Psort
                                            transmembrane     223   239   Psort
                                            transmembrane     263   279   Psort
                                            transmembrane     289   305   Psort
                                            transmembrane     349   365   Psort

PG0082    conserved hypothetical protein    uncleavable       1     26    Psort
          (36 kDa antigen)                  signal
                                            transmembrane     14    30    Psort
                                            transmembrane     14    31    Phd
                                            coil-coil         83    114   Coils
                                            coil-coil         151   182   Coils

PG0083    conserved hypothetical protein    uncleavable       1     13    Psort
          (possible alkaline secretion      signal
          protease)
                                            transmembrane     4     20    Psort
                                            coil-coil         212   239   Coils
                                            coil-coil         388   447   Coils

PG0084    DNA mismatch repair protein       coil-coil         492   533   Coils

PG0085    conserved hypothetical protein    coil-coil         128   156   Coils
          (YEBC-related)

PG0086    phenylalanyl-tRNA synthetase      non-globular      1     90    SEG
          beta subunit
                                            non-globular      690   780   SEG
                                            coil-coil         787   819   Coils

PG0088    hypothetical protein              cleavable signal  1     47    Psort
                                            non-globular      1     141   SEG

PG0092    hypothetical protein              uncleavable       1     48    Psort
                                            signal
                                            transmembrane     12    28    Psort

PG0093    probable glycosyltransferase      transmembrane     21    37    Psort
                                            transmembrane     21    38    Phd
                                            transmembrane     71    87    Psort
                                            transmembrane     71    93    Phd
                                            transmembrane     105   121   Psort
                                            transmembrane     105   123   Phd
                                            transmembrane     137   154   Phd
                                            transmembrane     142   158   Psort
                                            transmembrane     166   184   Phd
                                            transmembrane     169   185   Psort
                                            transmembrane     194   210   Psort
                                            transmembrane     195   219   Phd
                                            transmembrane     214   230   Psort
                                            transmembrane     253   270   Phd
                                            transmembrane     254   270   Psort
                                            transmembrane     275   294   Phd
                                            transmembrane     279   295   Psort
                                            transmembrane     326   343   Phd
                                            transmembrane     327   343   Psort
                                            transmembrane     348   365   Phd
                                            transmembrane     352   368   Psort

PG0094    UDP-N-acetyl-D-mannosaminuronic   uncleavable       1     21    Psort
          acid dehydrogenase                signal

PG0095    conserved hypothetical protein    cleavable signal  1     28    Psort
                                            transmembrane     7     24    Phd
                                            transmembrane     29    46    Phd
                                            transmembrane     85    102   Phd
                                            transmembrane     114   133   Phd
                                            transmembrane     116   132   Psort
                                            transmembrane     153   173   Phd
                                            transmembrane     189   205   Psort
                                            transmembrane     192   216   Phd
                                            transmembrane     207   223   Psort
                                            transmembrane     227   246   Phd
                                            transmembrane     232   248   Psort
                                            transmembrane     333   351   Phd
                                            transmembrane     337   353   Psort
                                            transmembrane     375   397   Phd
                                            transmembrane     382   398   Psort

PG0096    conserved hypothetical protein    uncleavable       1     17    Psort
          (possible transferase)            signal
                                            transmembrane     260   276   Psort

PG0098    conserved hypothetical protein    transmembrane     154   170   Psort

PG0100.1  serine-O-acetyltransferase        transmembrane     18    34    Psort
                                            non-globular      33    145   SEG

PG0102    conserved hypothetical protein    cleavable signal  1     39    Psort
          (possible flippase)
                                            transmembrane     17    34    Phd
                                            transmembrane     92    114   Phd
                                            transmembrane     96    112   Psort
                                            transmembrane     122   140   Phd
                                            transmembrane     127   143   Psort
                                            transmembrane     160   176   Psort
                                            transmembrane     166   187   Phd
                                            transmembrane     187   203   Psort
                                            transmembrane     192   209   Phd
                                            transmembrane     251   267   Psort
                                            transmembrane     256   273   Phd
                                            transmembrane     273   289   Psort
                                            transmembrane     278   295   Phd
                                            transmembrane     313   329   Psort
                                            transmembrane     319   337   Phd
                                            transmembrane     343   359   Psort
                                            transmembrane     345   362   Phd
                                            transmembrane     398   418   Phd
                                            transmembrane     401   417   Psort
                                            transmembrane     441   458   Phd
                                            transmembrane     441   457   Psort
                                            transmembrane     477   494   Phd
                                            transmembrane     478   494   Psort

PG0103    glycosyltransferase               uncleavable       1     58    Psort
                                            signal
                                            transmembrane     156   172   Psort
                                            transmembrane     202   219   Phd
                                            transmembrane     325   342   Phd

PG0108    conserved hypothetical protein    transmembrane     83    99    Psort
                                            transmembrane     88    105   Phd
                                            non-globular      113   155   SEG

PG0109    conserved hypothetical protein    non-globular      108   182   SEG

PG0110    alkaline phosphodiesterase        cleavable signal  1     19    Psort
          (eukaryotic)

PG0111    hypothetical protein              uncleavable       1     61    Psort
                                            signal
                                            transmembrane     77    93    Psort

PG0112    ferrochelatase                    uncleavable       1     60    Psort
                                            signal
                                            transmembrane     46    62    Psort

PG0113    hypothetical protein              non-globular      215   324   SEG

PG0114    mannosyltransferase               non-globular      249   374   SEG
                                            transmembrane     288   304   Psort

PG0117    hypothetical protein              coil-coil         23    53    Coils

PG0118    conserved hypothetical protein;   uncleavable       1     59    Psort
          possible transporter              signal
                                            transmembrane     14    30    Psort
                                            transmembrane     17    34    Phd
                                            transmembrane     44    60    Psort
                                            transmembrane     47    64    Phd
                                            transmembrane     92    109   Phd
                                            transmembrane     93    109   Psort
                                            transmembrane     131   149   Phd
                                            transmembrane     131   147   Psort
                                            transmembrane     160   176   Psort
                                            transmembrane     167   191   Phd
                                            transmembrane     186   202   Psort
                                            transmembrane     196   213   Phd
                                            transmembrane     264   280   Psort
                                            transmembrane     266   283   Phd
                                            transmembrane     321   338   Phd
                                            transmembrane     322   338   Psort
                                            transmembrane     343   360   Phd
                                            transmembrane     383   407   Phd
                                            transmembrane     386   402   Psort
                                            transmembrane     438   455   Phd
                                            transmembrane     440   456   Psort
                                            transmembrane     467   484   Phd
                                            transmembrane     468   484   Psort

PG0119    Mg2+ transport protein MgtE (CBS  non-globular      1     135   SEG
          domain)
                                            transmembrane     288   305   Phd
                                            transmembrane     288   304   Psort
                                            transmembrane     310   329   Phd
                                            transmembrane     359   383   Phd
                                            transmembrane     359   375   Psort
                                            transmembrane     384   400   Psort
                                            transmembrane     388   407   Phd
                                            transmembrane     426   443   Phd
                                            transmembrane     433   449   Psort

PG0120    hypothetical protein              non-globular      470   557   SEG
                                            transmembrane     654   670   Psort
                                            transmembrane     689   705   Psort
                                            transmembrane     738   754   Psort
                                            non-globular      739   932   SEG
                                            transmembrane     796   812   Psort
                                            transmembrane     894   910   Psort

PG0122    conserved hypothetical protein;   transmembrane     22    38    Psort
          possible dolichol-P-glucose
          synthetase
                                            transmembrane     25    42    Phd
                                            transmembrane     55    73    Phd
                                            transmembrane     57    73    Psort
                                            transmembrane     141   159   Phd
                                            transmembrane     141   157   Psort
                                            transmembrane     178   198   Phd
                                            transmembrane     183   199   Psort
                                            transmembrane     203   220   Phd
                                            transmembrane     234   250   Psort
                                            transmembrane     235   253   Phd
                                            transmembrane     264   281   Phd
                                            transmembrane     267   283   Psort
                                            transmembrane     286   303   Phd
                                            transmembrane     287   303   Psort
                                            transmembrane     317   334   Phd
                                            transmembrane     321   337   Psort

PG0123    aminoacyl-histidine dipeptidase   non-globular      155   225   SEG
          (peptidase d)

PG0125    membrane-bound lytic murein       cleavable signal  1     28    Psort
          transglycosylase D precursor
          (regulatory protein DNIR)
                                            gram negative     1     26    SignalP
                                            signal
                                            transmembrane     171   188   Phd
                                            non-globular      398   451   SEG

PG0127    conserved hypothetical protein    cleavable signal  1     37    Psort
                                            gram negative     1     22    SignalP
                                            signal
                                            non-globular      23    87    SEG
                                            transmembrane     177   193   Psort

PG0129    SpoOJ regulator (chromosome       transmembrane     130   146   Psort
          partitioning ATPase)
                                            transmembrane     131   149   Phd

PG0130    hydrolase/beta-alanine synthase   transmembrane     69    85    Psort
                                            transmembrane     133   149   Psort

PG0131    conserved hypothetical protein    non-globular      113   205   SEG

PG0132    hypothetical protein              uncleavable       1     42    Psort
                                            signal
                                            gram negative     1     22    SignalP
                                            signal
                                            transmembrane     3     20    Phd
                                            transmembrane     6     22    Psort
                                            transmembrane     54    71    Phd
                                            transmembrane     56    72    Psort

PG0133    hypothetical protein              non-globular      1     140   SEG
                                            transmembrane     79    95    Psort

PG0134    conserved hypothetical protein    non-globular      80    187   SEG

PG0135    hypothetical protein              may be a                      Psort
                                            lipoprotein
                                            gram negative     1     33    SignalP
                                            signal
                                            transmembrane     14    31    Phd

PG0137    hypothetical protein              non-globular      167   265   SEG
                                            transmembrane     279   296   Phd
                                            transmembrane     279   295   Psort

PG0138    conserved hypothetical protein    non-globular      261   325   SEG

PG0139    signal recognition particle       non-globular      1     109   SEG

PG0140    carboxynorspermidine              transmembrane     34    51    Phd
          decarboxylase

PG0143    protoporphyrinogen oxidase (HEMK  coil-coil         1     34    Coils
          protein homolog)
                                            transmembrane     118   134   Psort

PG0144    hypothetical protein              non-globular      67    161   SEG

PG0145    possible competence protein F     non-globular      177   246   SEG
          (phosphoribosyl transferase)
                                            transmembrane     217   233   Psort

PG0146    endothelin converting             may be a                      Psort
          enzyme/neprilysin (PepO)          lipoprotein

PG0147    conserved hypothetical protein    uncleavable       1     55    Psort
                                            signal

PG0148    possible RNA polymerase sigma     non-globular      92    193   SEG
          factor/ECF subfamily  (sigma-70)

PG0153    peptidyl-tRNA hydrolase (stage V  uncleavable       1     31    Psort
          sporulation protein C)            signal

PG0156    methionyl-tRNA synthetase         coil-coil         539   567   Coils

PG0157    probable 2',3'-cyclic-nucleotide  may be a                      Psort
          2'-phosphodiesterase              lipoprotein
                                            gram negative     1     28    SignalP
                                            signal

PG0158    conserved hypothetical protein    cleavable signal  1     22    Psort
          (possible exonuclease)
                                            transmembrane     56    72    Psort

PG0160    NADH oxidase/peroxidase           non-globular      329   412   SEG
                                            non-globular      782   875   SEG
                                            coil-coil         903   938   Coils

PG0161    Pg-II fimbriae c                  cleavable signal  1     50    Psort
                                            gram negative     1     21    SignalP
                                            signal

PG0162    ISPg4 transposase                 uncleavable       1     51    Psort
                                            signal
                                            transmembrane     321   337   Psort

PG0163    Mfa1 protein, 67 kDa fimbrillin   non-globular      1     190   SEG
                                            non-globular      400   461   SEG

PG0164    conserved hypothetical protein    uncleavable       1     21    Psort
                                            signal
                                            transmembrane     12    28    Psort

PG0165    lipoprotein                       may be a                      Psort
                                            lipoprotein
                                            gram negative     1     24    SignalP
                                            signal

PG0166    immunoreactive 32 kDa antigen     uncleavable       1     18    Psort
                                            signal
                                            gram negative     1     20    SignalP
                                            signal
                                            transmembrane     4     20    Psort

PG0167    conserved hypothetical protein;   cleavable signal  1     25    Psort
          Rsa related
                                            non-globular      62    154   SEG
                                            non-globular      697   790   SEG

PG0168    conserved hypothetical protein;   cleavable signal  1     22    Psort
          Rsa/SAP related
                                            non-globular      38    148   SEG
                                            non-globular      386   466   SEG
                                            transmembrane     848   864   Psort
                                            non-globular      976   1065  SEG
                                            non-globular      1629  1758  SEG

PG0169    ISPg1 transposase (IS1106-        transmembrane     58    74    Psort
          related transposase)
                                            non-globular      138   235   SEG
                                            coil-coil         284   313   Coils

PG0170    tonB-dependent outer membrane     cleavable signal  1     20    Psort
          receptor

PG0171    receptor antigen B                uncleavable       1     19    Psort
                                            signal
                                            transmembrane     4     20    Psort
                                            non-globular      208   295   SEG

PG0172    lipoprotein                       uncleavable       1     21    Psort
                                            signal
                                            transmembrane     10    26    Psort

PG0173    conserved hypothetical protein    cleavable signal  1     20    Psort
                                            gram negative     1     28    SignalP
                                            signal
                                            non-globular      123   183   SEG

PG0175    probable outer membrane protein   uncleavable       1     40    Psort
          (Omp85 analog)                    signal
                                            transmembrane     5     21    Psort
                                            non-globular      560   589   SEG
                                            non-globular      747   819   SEG

PG0176    possible outer membrane protein   uncleavable       1     24    Psort
                                            signal
                                            gram negative     1     26    SignalP
                                            signal
                                            transmembrane     8     24    Psort
                                            coil-coil         39    106   Coils

PG0177    possible outer membrane protein   cleavable signal  1     18    Psort
                                            gram negative     1     18    SignalP
                                            signal
                                            coil-coil         36    111   Coils

PG0178    ISPg3 (IS195) transposase         coil-coil         220   251   Coils

PG0179    rubrerythrin                      non-globular      1     157   SEG

PG0180    probable zinc protease/ 106 kDa   cleavable signal  1     22    Psort
          immunoreactive protein
                                            non-globular      437   566   SEG
                                            coil-coil         862   889   Coils

PG0181    hypothetical protein              transmembrane     71    87    Psort

PG0182    conserved hypothetical protein    non-globular      1     111   SEG
          (possible cytochrome)
                                            transmembrane     31    47    Psort
                                            transmembrane     54    70    Psort
                                            transmembrane     94    110   Psort
                                            transmembrane     133   149   Psort

PG0184    ribonuclease P protein component  non-globular      32    80    SEG

PG0186    conserved hypothetical protein    transmembrane     14    32    Phd
                                            transmembrane     15    31    Psort
                                            transmembrane     37    54    Phd
                                            transmembrane     61    82    Phd
                                            transmembrane     69    85    Psort
                                            transmembrane     101   117   Psort
                                            transmembrane     102   126   Phd
                                            transmembrane     143   159   Psort
                                            transmembrane     148   168   Phd
                                            transmembrane     169   185   Psort
                                            transmembrane     173   193   Phd
                                            transmembrane     201   220   Phd
                                            transmembrane     204   220   Psort

PG0187    hypothetical protein              gram negative     1     42    SignalP
                                            signal
                                            transmembrane     23    39    Psort
                                            transmembrane     26    44    Phd
                                            transmembrane     49    66    Phd
                                            transmembrane     52    68    Psort

PG0188    translation elongation factor G   transmembrane     101   117   Psort
          protein

PG0189    probable formate dehydrogenase    transmembrane     28    46    Phd
          (formate transporter)
                                            transmembrane     32    48    Psort
                                            transmembrane     65    81    Psort
                                            transmembrane     67    85    Phd
                                            transmembrane     109   131   Phd
                                            transmembrane     113   129   Psort
                                            transmembrane     159   175   Psort
                                            transmembrane     162   179   Phd
                                            transmembrane     191   215   Phd
                                            transmembrane     233   251   Phd
                                            transmembrane     233   249   Psort

PG0190    cobalamin biosynthesis protein    non-globular      185   319   SEG

PG0191    precorrin methylase               cleavable signal  1     24    Psort
                                            transmembrane     68    84    Psort

PG0195    conserved hypothetical protein    non-globular      55    162   SEG
                                            transmembrane     91    107   Psort

PG0196    hypothetical protein              gram negative     1     43    SignalP
                                            signal
                                            transmembrane     22    38    Psort

PG0197    hypothetical protein              cleavable signal  1     17    Psort
                                            gram negative     1     20    SignalP
                                            signal

PG0198    conserved hypothetical protein    transmembrane     38    54    Psort

PG0198.2  hypothetical protein              cleavable signal  1     28    Psort
                                            gram negative     1     25    SignalP
                                            signal
                                            transmembrane     94    110   Psort

PG0199    hypothetical protein              transmembrane     48    65    Phd
                                            transmembrane     85    102   Phd
                                            transmembrane     91    107   Psort
                                            transmembrane     112   135   Phd
                                            coil-coil         151   182   Coils

PG0201    DNA polymerase III, epsilon       uncleavable       1     14    Psort
          chain                             signal

PG0204    conserved hypothetical protein    uncleavable       1     35    Psort
          (probable integral membrane       signal
          protein)
                                            transmembrane     21    39    Phd
                                            transmembrane     24    40    Psort
                                            transmembrane     57    73    Psort
                                            transmembrane     58    76    Phd
                                            transmembrane     81    99    Phd
                                            transmembrane     89    105   Psort
                                            transmembrane     114   130   Psort
                                            transmembrane     117   136   Phd
                                            transmembrane     141   159   Phd
                                            transmembrane     145   161   Psort
                                            transmembrane     176   192   Psort
                                            transmembrane     178   195   Phd

PG0205    ISPg4 transposase                 uncleavable       1     51    Psort
                                            signal
                                            transmembrane     321   337   Psort

PG0206    conserved hypothetical protein    may be a                      Psort
                                            lipoprotein
                                            non-globular      389   479   SEG
                                            transmembrane     862   878   Psort

PG0207    radA-related DNA repair protein   non-globular      59    141   SEG
          (sms)
                                            transmembrane     201   218   Phd
                                            transmembrane     297   315   Phd
                                            transmembrane     368   386   Phd
                                            transmembrane     371   387   Psort

PG0211    conserved hypothetical protein    may be a                      Psort
                                            lipoprotein
                                            gram negative     1     26    SignalP
                                            signal
                                            non-globular      27    141   SEG

PG0212    carboxypeptidase                  cleavable signal  1     27    Psort
          D/immunoreactive 92 kDa antigen
          PG21
                                            gram negative     1     27    SignalP
                                            signal
                                            non-globular      602   713   SEG

PG0212.1  hypothetical protein              gram negative     1     17    SignalP
                                            signal

PG0213    immunoreactive 23kD antigen PG66  cleavable signal  1     21    Psort
                                            gram negative     1     21    SignalP
                                            signal

PG0215    conserved hypothetical protein    uncleavable       1     61    Psort
                                            signal
                                            gram negative     1     25    SignalP
                                            signal
                                            transmembrane     4     20    Psort
                                            non-globular      353   457   SEG

PG0217    hypothetical protein              non-globular      1     95    SEG

PG0219    conserved hypothetical protein;   cleavable signal  1     19    Psort
          possible lipoprotein
                                            gram negative     1     19    SignalP
                                            signal
                                            coil-coil         84    153   Coils

PG0220    conserved hypothetical protein    non-globular      63    141   SEG
                                            transmembrane     94    110   Psort

PG0222    universal stress protein, UspA    coil-coil         140   167   Coils

PG0224    hypothetical protein              uncleavable       1     15    Psort
                                            signal
                                            gram negative     1     24    SignalP
                                            signal
                                            transmembrane     7     23    Psort

PG0227    hypothetical protein              transmembrane     29    45    Psort
                                            transmembrane     32    49    Phd
                                            transmembrane     78    95    Phd

PG0229    N utilization substance protein   non-globular      46    125   SEG
          A (NusA) (transcription
          termination-antitermination
          factor) (transcriptional
          terminator)
                                            non-globular      382   444   SEG

PG0230    translation initiation factor     non-globular      56    228   SEG
          IF-2
                                            coil-coil         257   290   Coils
                                            non-globular      291   394   SEG
                                            non-globular      756   871   SEG
                                            transmembrane     822   838   Psort

PG0231    possible CvpA family protein      uncleavable       1     42    Psort
                                            signal
                                            transmembrane     3     20    Phd
                                            transmembrane     4     20    Psort
                                            transmembrane     25    42    Phd
                                            transmembrane     28    44    Psort
                                            transmembrane     62    82    Phd
                                            transmembrane     66    82    Psort
                                            transmembrane     99    119   Phd
                                            transmembrane     105   121   Psort

PG0236    ISPg3 (IS195) transposase         coil-coil         220   251   Coils

PG0238    glycosyltransferase               transmembrane     264   280   Psort

PG0239    arginyl-tRNA synthetase           coil-coil         207   237   Coils
          (arginine-tRNA ligase)
                                            non-globular      393   448   SEG

PG0243    single stranded DNA-binding       non-globular      89    156   SEG
          protein (single-strand binding
          protein) (ssDNA-binding protein)

PG0244    hemolysin-related protein with    uncleavable       1     19    Psort
          CBS domains                       signal
                                            transmembrane     3     19    Psort
                                            non-globular      23    125   SEG
                                            transmembrane     56    72    Psort
                                            transmembrane     88    104   Psort

PG0246    thioredoxin                       cleavable signal  1     24    Psort
                                            gram negative     1     29    SignalP
                                            signal
                                            transmembrane     125   141   Psort

PG0248    conserved hypothetical protein    transmembrane     262   278   Psort

PG0249    ISPg2 (PGIS2) transposase         transmembrane     22    38    Psort
                                            coil-coil         43    70    Coils
                                            non-globular      331   376   SEG

PG0250    hypothetical protein              coil-coil         15    62    Coils

PG0251    NADP-dependent malic enzyme       transmembrane     66    82    Psort
          (malate oxidoreductase and
          phosphotransacetylase)
                                            transmembrane     166   182   Psort
                                            transmembrane     743   759   Psort

PG0252    conserved hypothetical            uncleavable       1     39    Psort
          protein(possible ABC permease     signal
          with MSD domain)
                                            transmembrane     17    33    Psort
                                            transmembrane     21    38    Phd
                                            transmembrane     316   333   Phd
                                            transmembrane     317   333   Psort
                                            transmembrane     365   387   Phd
                                            transmembrane     367   383   Psort
                                            transmembrane     408   426   Phd
                                            transmembrane     415   431   Psort

PG0253    conserved hypothetical            transmembrane     49    66    Phd
          protein(possible ABC permease
          with MSD domain)
                                            transmembrane     51    67    Psort
                                            transmembrane     325   341   Psort
                                            transmembrane     326   343   Phd
                                            transmembrane     378   394   Psort
                                            transmembrane     379   400   Phd
                                            transmembrane     422   444   Phd
                                            transmembrane     423   439   Psort

PG0257    membrane permease                 transmembrane     20    36    Psort
                                            coil-coil         106   167   Coils
                                            coil-coil         187   235   Coils
                                            non-globular      327   416   SEG

PG0259    conserved hypothetical protein;   cleavable signal  1     31    Psort
          possible outer membrane protein
                                            gram negative     1     31    SignalP
                                            signal
                                            non-globular      17    112   SEG
                                            coil-coil         204   240   Coils
                                            non-globular      242   306   SEG
                                            coil-coil         382   424   Coils

PG0261    hypothetical protein              transmembrane     23    39    Psort
                                            transmembrane     35    57    Phd

PG0262    hypothetical protein              cleavable signal  1     19    Psort
                                            gram negative     1     24    SignalP
                                            signal

PG0263    probable serine/threonine kinase  cleavable signal  1     25    Psort
                                            gram negative     1     32    SignalP
                                            signal

PG0264    conserved hypothetical protein    transmembrane     63    81    Phd
                                            transmembrane     69    85    Psort
                                            transmembrane     86    103   Phd
                                            transmembrane     90    106   Psort
                                            non-globular      104   190   SEG
                                            coil-coil         191   256   Coils
                                            coil-coil         292   319   Coils

PG0265    conserved hypothetical protein    cleavable signal  1     32    Psort

PG0266    hypothetical protein              cleavable signal  1     24    Psort
                                            gram negative     1     24    SignalP
                                            signal
                                            non-globular      276   361   SEG

PG0267    conserved hypothetical            uncleavable       1     61    Psort
          protein(possible chromate         signal
          transport protein)
                                            transmembrane     7     23    Psort
                                            transmembrane     12    36    Phd
                                            transmembrane     62    78    Psort
                                            transmembrane     64    82    Phd
                                            transmembrane     90    106   Psort
                                            transmembrane     92    109   Phd
                                            transmembrane     118   134   Psort
                                            transmembrane     123   142   Phd
                                            transmembrane     149   165   Psort
                                            transmembrane     161   181   Phd
                                            transmembrane     166   182   Psort

PG0268    chromate transport protein ChrA   non-globular      47    197   SEG
          (chromate transporter)
                                            transmembrane     79    95    Psort
                                            transmembrane     114   130   Psort
                                            transmembrane     158   174   Psort
                                            transmembrane     181   197   Psort

PG0269    conserved hypothetical protein    non-globular      1     97    SEG

PG0270    conserved hypothetical            uncleavable       1     27    Psort
          protein(possible                  signal
          glycosyltransferase)
                                            transmembrane     275   291   Psort

PG0272    phosphoribosylformylglycinamidin  non-globular      620   686   SEG
          e (FGAM) synthase
                                            transmembrane     659   675   Psort
                                            transmembrane     834   850   Psort

PG0273    ISPg3-related (IS195-related)     uncleavable       1     30    Psort
          element                           signal

PG0274    conserved hypothetical protein    cleavable signal  1     43    Psort
                                            gram negative     1     20    SignalP
                                            signal

PG0275    hypothetical protein              transmembrane     76    95    Phd
                                            transmembrane     76    92    Psort
                                            transmembrane     106   123   Phd
                                            transmembrane     107   123   Psort

PG0276    polyferredoxin                    cleavable signal  1     61    Psort
                                            gram negative     1     24    SignalP
                                            signal
                                            transmembrane     4     22    Phd
                                            transmembrane     77    94    Phd

PG0278    Na-translocating NADH-quinone     transmembrane     23    39    Psort
          reductase, Nqr2 subunit
                                            transmembrane     27    51    Phd
                                            transmembrane     43    59    Psort
                                            transmembrane     56    73    Phd
                                            transmembrane     74    90    Psort
                                            transmembrane     81    105   Phd
                                            transmembrane     94    110   Psort
                                            transmembrane     121   138   Phd
                                            transmembrane     193   209   Psort
                                            transmembrane     197   221   Phd
                                            transmembrane     220   236   Psort
                                            transmembrane     245   262   Phd
                                            transmembrane     276   292   Psort
                                            transmembrane     278   295   Phd
                                            transmembrane     300   317   Phd

PG0279    conserved hypothetical protein    cleavable signal  1     14    Psort
          (possible nitrogen fixing
          protein RnfG)

PG0280    Na+-translocating NADH-quinone    cleavable signal  1     30    Psort
          reductase
                                            gram negative     1     35    SignalP
                                            signal
                                            transmembrane     17    34    Phd
                                            transmembrane     39    57    Phd
                                            transmembrane     43    59    Psort
                                            transmembrane     68    86    Phd
                                            transmembrane     71    87    Psort
                                            transmembrane     97    113   Psort
                                            transmembrane     98    115   Phd
                                            transmembrane     131   148   Phd
                                            transmembrane     132   148   Psort
                                            transmembrane     165   186   Phd
                                            transmembrane     170   186   Psort

PG0281    Na+-translocating NADH-quinone    cleavable signal  1     13    Psort
          oxidoreductase
                                            transmembrane     5     22    Phd
                                            transmembrane     41    59    Phd
                                            transmembrane     42    58    Psort
                                            transmembrane     69    88    Phd
                                            transmembrane     74    90    Psort
                                            transmembrane     106   124   Phd
                                            transmembrane     107   123   Psort
                                            transmembrane     132   150   Phd
                                            transmembrane     137   153   Psort
                                            transmembrane     171   188   Phd
                                            transmembrane     173   189   Psort

PG0283    thiamin biosynthesis lipoprotein  uncleavable       1     28    Psort
          ApbE                              signal
                                            transmembrane     7     23    Psort

PG0285    glycosyltransferase               cleavable signal  1     22    Psort
                                            transmembrane     213   230   Phd
                                            transmembrane     239   262   Phd
                                            transmembrane     241   257   Psort
                                            transmembrane     277   294   Phd
                                            transmembrane     278   294   Psort

PG0286    hypothetical protein              uncleavable       1     48    Psort
                                            signal
                                            transmembrane     7     23    Psort
                                            transmembrane     19    36    Phd
                                            transmembrane     27    43    Psort
                                            transmembrane     41    58    Phd
                                            transmembrane     76    92    Psort
                                            transmembrane     79    96    Phd
                                            transmembrane     150   167   Phd

PG0287    conserved hypothetical protein    transmembrane     68    84    Psort
                                            transmembrane     70    87    Phd

PG0290    seryl-tRNA synthetase (serine--   coil-coil         69    106   Coils
          tRNA ligase)

PG0291    probable dipeptidyl peptidase     non-globular      391   473   SEG
                                            non-globular      791   886   SEG

PG0293    conserved hypothetical protein    cleavable signal  1     35    Psort
                                            gram negative     1     35    SignalP
                                            signal

PG0294    conserved hypothetical protein    cleavable signal  1     23    Psort
                                            gram negative     1     23    SignalP
                                            signal
                                            transmembrane     130   147   Phd
                                            non-globular      157   281   SEG

PG0296    possible proton/sodium:glutamate  uncleavable       1     41    Psort
          symporter protein                 signal
                                            non-globular      1     225   SEG
                                            transmembrane     6     22    Psort
                                            transmembrane     25    41    Psort
                                            transmembrane     45    61    Psort
                                            transmembrane     72    88    Psort
                                            transmembrane     131   147   Psort
                                            transmembrane     167   183   Psort
                                            transmembrane     200   216   Psort
                                            non-globular      270   392   SEG
                                            transmembrane     283   299   Psort
                                            transmembrane     307   323   Psort

PG0299    phenylalanine/histidine ammonia-  transmembrane     334   350   Psort
          lyase
                                            transmembrane     427   443   Psort

PG0301    conserved hypothetical protein    transmembrane     29    46    Phd
          (possible serine cycle
          enzyme,formiminotransferase
          cyclodeaminase)
                                            transmembrane     151   168   Phd
                                            transmembrane     163   179   Psort

PG0302    hypothetical protein              transmembrane     33    49    Psort

PG0303    conserved hypothetical protein    cleavable signal  1     28    Psort
                                            transmembrane     20    38    Phd
                                            transmembrane     56    74    Phd
                                            transmembrane     60    76    Psort
                                            transmembrane     101   118   Phd
                                            transmembrane     141   157   Psort
                                            transmembrane     143   167   Phd
                                            transmembrane     161   177   Psort
                                            transmembrane     232   249   Phd
                                            transmembrane     234   250   Psort
                                            transmembrane     289   308   Phd
                                            transmembrane     294   310   Psort
                                            transmembrane     324   341   Phd
                                            transmembrane     363   381   Phd
                                            transmembrane     368   384   Psort

PG0304    imidazolonepropionase             transmembrane     337   353   Psort
          (imidazolone-5-propionate
          hydrolase)

PG0307    transcription termination factor  non-globular      49    108   SEG
          rho
                                            coil-coil         109   143   Coils
                                            non-globular      147   280   SEG

PG0308    conserved hypothetical protein    cleavable signal  1     50    Psort
                                            gram negative     1     31    SignalP
                                            signal
                                            non-globular      32    302   SEG
                                            transmembrane     71    87    Psort
                                            transmembrane     101   117   Psort
                                            transmembrane     126   142   Psort
                                            transmembrane     155   171   Psort
                                            transmembrane     186   202   Psort
                                            transmembrane     219   235   Psort
                                            transmembrane     273   289   Psort

PG0309    glycosyltransferase               transmembrane     241   259   Phd
                                            transmembrane     246   262   Psort
                                            transmembrane     272   295   Phd
                                            transmembrane     274   290   Psort

PG0312    conserved hypothetical protein    coil-coil         104   131   Coils
                                            non-globular      156   246   SEG
                                            coil-coil         565   600   Coils
                                            coil-coil         878   928   Coils

PG0313    hypothetical protein              uncleavable       1     28    Psort
                                            signal
                                            transmembrane     11    27    Psort
                                            transmembrane     13    30    Phd

PG0315    conserved hypothetical protein    non-globular      1     38    SEG
                                            gram negative     1     50    SignalP
                                            signal
                                            transmembrane     38    54    Psort

PG0316    hypothetical protein              cleavable signal  1     24    Psort
                                            gram negative     1     24    SignalP
                                            signal
                                            transmembrane     44    65    Phd
                                            transmembrane     52    68    Psort
                                            transmembrane     76    94    Phd
                                            transmembrane     77    93    Psort
                                            transmembrane     116   133   Phd
                                            transmembrane     117   133   Psort

PG0320    ATP-dependent DNA helicase        transmembrane     297   313   Psort

PG0321    conserved hypothetical protein    transmembrane     226   242   Psort
          (possible glycerol-3-
          phosphatase)

PG0322    conserved hypothetical protein    cleavable signal  1     22    Psort
                                            gram negative     1     25    SignalP
                                            signal
                                            non-globular      100   343   SEG

PG0323    hypothetical protein              uncleavable       1     22    Psort
                                            signal
                                            transmembrane     7     23    Psort
                                            transmembrane     11    30    Phd
                                            transmembrane     55    71    Psort
                                            transmembrane     56    73    Phd

PG0324    conserved hypothetical protein    transmembrane     14    30    Psort
          (possible sialidase)

PG0326    hypothetical protein              transmembrane     15    31    Psort
                                            transmembrane     19    36    Phd

PG0326.1  hypothetical protein              transmembrane     44    60    Psort

PG0327    hypothetical protein              cleavable signal  1     47    Psort
                                            transmembrane     4     21    Phd
                                            transmembrane     29    46    Phd

PG0328    conserved hypothetical protein    transmembrane     21    38    Phd
                                            transmembrane     23    39    Psort
                                            coil-coil         70    100   Coils

PG0331    conserved hypothetical protein    cleavable signal  1     25    Psort
          (possible flavoredoxin)

PG0332    conserved hypothetical protein    cleavable signal  1     25    Psort
                                            gram negative     1     25    SignalP
                                            signal
                                            coil-coil         75    113   Coils

PG0333    conserved hypothetical protein    cleavable signal  1     20    Psort
                                            transmembrane     203   219   Psort
                                            transmembrane     251   267   Psort
                                            non-globular      398   435   SEG

PG0334    hypothetical protein              cleavable signal  1     25    Psort
                                            non-globular      1     62    SEG
                                            transmembrane     46    62    Psort

PG0335    conserved hypothetical protein;   cleavable signal  1     35    Psort
          possible amino acid-binding
          periplasmic protein

PG0338    conserved hypothetical protein    non-globular      1     115   SEG

PG0339    DNA gyrase subunit B              coil-coil         340   390   Coils
          (topoisomerase)
                                            transmembrane     493   509   Psort

PG0340    phosphopantetheine                cleavable signal  1     18    Psort
          adenylyltransferase

PG0341    hypothetical protein              cleavable signal  1     24    Psort
                                            gram negative     1     24    SignalP
                                            signal

PG0344    30S ribosomal protein S2          non-globular      227   281   SEG

PG0345    elongation factor TS (EF-TS)      coil-coil         19    50    Coils

PG0346    excinuclease ABC subunit B        coil-coil         433   465   Coils
                                            coil-coil         640   678   Coils

PG0347    Na+/H+ antiporter                 cleavable signal  1     44    Psort
                                            transmembrane     28    45    Phd
                                            transmembrane     57    74    Phd
                                            transmembrane     57    73    Psort
                                            transmembrane     94    111   Phd
                                            transmembrane     95    111   Psort
                                            transmembrane     121   138   Phd
                                            transmembrane     191   210   Phd
                                            transmembrane     192   208   Psort
                                            transmembrane     231   248   Phd
                                            transmembrane     231   247   Psort
                                            transmembrane     253   270   Phd
                                            transmembrane     278   295   Phd
                                            transmembrane     280   296   Psort
                                            transmembrane     302   318   Psort
                                            transmembrane     310   328   Phd
                                            transmembrane     343   360   Phd
                                            transmembrane     370   387   Phd
                                            transmembrane     370   386   Psort

PG0349    zinc metalloprotease              cleavable signal  1     16    Psort
                                            transmembrane     5     25    Phd
                                            transmembrane     107   123   Psort
                                            transmembrane     109   128   Phd
                                            transmembrane     299   316   Phd
                                            transmembrane     366   383   Phd
                                            transmembrane     372   388   Psort
                                            transmembrane     388   405   Phd
                                            transmembrane     410   426   Psort
                                            transmembrane     413   430   Phd

PG0350    DNA-mismatch repair protein       non-globular      236   280   SEG
                                            coil-coil         548   668   Coils

PG0354    conserved hypothetical            transmembrane     50    70    Phd
          protein(possible translocase
          secE subunit)
                                            transmembrane     50    66    Psort

PG0357    50S ribosomal protein L1          transmembrane     111   127   Psort

PG0359    50S ribosomal protein L7/L12      coil-coil         1     29    Coils
                                            non-globular      33    125   SEG
                                            transmembrane     35    51    Psort

PG0360    DNA-directed RNA polymerase       non-globular      353   418   SEG
          subunit beta
                                            non-globular      790   947   SEG

PG0361    DNA-directed RNA polymerase       non-globular      253   375   SEG
          subunit beta'

PG0363    hypothetical protein              coil-coil         67    96    Coils

PG0364    hypothetical protein              uncleavable       1     45    Psort
                                            signal
                                            transmembrane     82    100   Phd

PG0365    RecF protein                      coil-coil         156   189   Coils

PG0366    hypothetical protein              cleavable signal  1     27    Psort

PG0367    conserved hypothetical protein    non-globular      307   427   SEG
          (possible signal peptidase
          II/TPL protein)

PG0368    conserved hypothetical            cleavable signal  1     20    Psort
          protein(possible CTP synthase)
                                            coil-coil         30    185   Coils
                                            non-globular      186   318   SEG
                                            transmembrane     403   419   Psort

PG0370    hypothetical protein              coil-coil         16    64    Coils

PG0373    conserved hypothetical protein    cleavable signal  1     21    Psort
                                            gram negative     1     21    SignalP
                                            signal
                                            transmembrane     57    74    Phd
                                            transmembrane     202   219   Phd

PG0374    hypothetical protein              transmembrane     21    37    Psort
                                            non-globular      105   195   SEG
                                            transmembrane     221   237   Psort
                                            transmembrane     274   290   Psort

PG0375    conserved hypothetical protein    uncleavable       1     33    Psort
                                            signal
                                            non-globular      755   931   SEG

PG0376    possible outer membrane protein   cleavable signal  1     24    Psort

PG0377    DNA mismatch repair protein       transmembrane     132   148   Psort
                                            non-globular      472   542   SEG
                                            coil-coil         558   592   Coils

PG0378    hypothetical protein              coil-coil         26    53    Coils
                                            transmembrane     98    114   Psort

PG0379    conserved hypothetical protein    cleavable signal  1     28    Psort
                                            gram negative     1     31    SignalP
                                            signal
                                            non-globular      501   626   SEG

PG0380    conserved hypothetical            cleavable signal  1     24    Psort
          protein(possible peptidyl-prolyl
          isomerase)
                                            gram negative     1     24    SignalP
                                            signal

PG0381    ATP-dependent DNA helicase        transmembrane     54    70    Psort

PG0384    ATP-dependent clp protease        transmembrane     118   134   Psort
          proteolytic subunit
          (endopeptidase CLP)

PG0385    conserved hypothetical protein    cleavable signal  1     36    Psort
                                            gram negative     1     36    SignalP
                                            signal
                                            transmembrane     22    39    Phd
                                            non-globular      108   240   SEG

PG0386    conserved hypothetical protein    cleavable signal  1     22    Psort
                                            gram negative     1     22    SignalP
                                            signal
                                            non-globular      20    285   SEG

PG0387    hypothetical protein              transmembrane     30    46    Psort

PG0389    hypothetical protein              gram negative     1     40    SignalP
                                            signal
                                            transmembrane     20    37    Phd
                                            transmembrane     21    37    Psort
                                            transmembrane     177   195   Phd

PG0390    acetylesterase                    uncleavable       1     48    Psort
                                            signal

PG0392    ISPg5-related orf-1               coil-coil         79    110   Coils

PG0393    pyruvate synthase alpha subunit/  non-globular      267   363   SEG
          ferredoxin oxidoreductase alpha
          subunit
                                            transmembrane     294   310   Psort
                                            transmembrane     325   341   Psort

PG0397    conserved hypothetical protein    cleavable signal  1     29    Psort
                                            non-globular      1     220   SEG
                                            gram negative     1     29    SignalP
                                            signal
                                            transmembrane     55    71    Psort
                                            transmembrane     80    96    Psort
                                            transmembrane     126   142   Psort
                                            transmembrane     149   165   Psort
                                            transmembrane     213   229   Psort

PG0398    capsular polysaccharide           non-globular      77    154   SEG
          biosythesis protein

PG0399    capsular polysaccharide           transmembrane     40    57    Phd
          transport protein
                                            transmembrane     43    59    Psort
                                            coil-coil         223   261   Coils
                                            coil-coil         420   447   Coils
                                            transmembrane     513   530   Phd
                                            transmembrane     513   529   Psort
                                            transmembrane     620   636   Psort
                                            non-globular      775   822   SEG

PG0400    conserved hypothetical protein    cleavable signal  1     58    Psort
          (possible outer membrane
          protein)
                                            transmembrane     12    29    Phd
                                            transmembrane     41    58    Phd
                                            transmembrane     285   302   Phd
                                            transmembrane     287   303   Psort

PG0401    conserved hypothetical protein    transmembrane     28    45    Phd
                                            transmembrane     29    45    Psort
                                            coil-coil         60    95    Coils

PG0402    hypothetical protein              cleavable signal  1     25    Psort
                                            gram negative     1     29    SignalP
                                            signal

PG0403    hypothetical protein              transmembrane     306   322   Psort

PG0404    hypothetical protein              non-globular      116   237   SEG

PG0404.1  hypothetical protein              transmembrane     3     19    Psort

PG0405    conserved hypothetical            coil-coil         25    60    Coils
          protein(possible hemagglutinin
          protein)
                                            coil-coil         152   179   Coils
                                            non-globular      302   348   SEG

PG0406    conserved hypothetical protein    non-globular      37    145   SEG
                                            transmembrane     41    57    Psort
                                            transmembrane     67    83    Psort
                                            transmembrane     104   120   Psort
                                            transmembrane     129   145   Psort
                                            transmembrane     183   199   Psort
                                            transmembrane     249   265   Psort
                                            non-globular      260   468   SEG
                                            transmembrane     304   320   Psort
                                            transmembrane     352   368   Psort
                                            transmembrane     380   396   Psort
                                            transmembrane     413   429   Psort
                                            transmembrane     440   456   Psort
                                            transmembrane     478   494   Psort
                                            non-globular      499   571   SEG
                                            transmembrane     534   550   Psort
                                            transmembrane     594   610   Psort
                                            transmembrane     636   652   Psort

PG0408    molybdopterin synthase            non-globular      1     81    SEG
          sulphurylase
                                            transmembrane     31    47    Psort
                                            non-globular      176   235   SEG

PG0410    conserved hypothetical protein    cleavable signal  1     24    Psort

PG0411    conserved hypothetical protein    cleavable signal  1     31    Psort
                                            gram negative     1     31    SignalP
                                            signal

PG0412    conserved hypothetical protein    cleavable signal  1     33    Psort
                                            gram negative     1     33    SignalP
                                            signal

PG0413    conserved hypothetical protein    cleavable signal  1     19    Psort
          (possible hemolysin-related
          protein)
                                            non-globular      20    111   SEG
                                            transmembrane     65    81    Psort
                                            transmembrane     90    106   Psort
                                            transmembrane     122   138   Psort

PG0414    possible peptidyl-prolyl          cleavable signal  1     24    Psort
          isomerase
                                            coil-coil         41    82    Coils
                                            non-globular      348   412   SEG
                                            coil-coil         578   620   Coils

PG0415    conserved hypothetical protein    uncleavable       1     23    Psort
                                            signal
                                            transmembrane     11    27    Psort
                                            transmembrane     45    62    Phd
                                            transmembrane     67    84    Phd
                                            transmembrane     68    84    Psort
                                            transmembrane     96    112   Psort
                                            transmembrane     101   125   Phd
                                            transmembrane     116   132   Psort
                                            transmembrane     149   166   Phd
                                            transmembrane     149   165   Psort
                                            transmembrane     177   195   Phd
                                            transmembrane     181   197   Psort
                                            transmembrane     207   224   Phd
                                            transmembrane     212   228   Psort
                                            transmembrane     245   261   Psort
                                            transmembrane     246   270   Phd
                                            transmembrane     274   290   Psort
                                            transmembrane     275   292   Phd
                                            transmembrane     312   328   Psort
                                            transmembrane     314   333   Phd
                                            transmembrane     338   355   Phd
                                            transmembrane     366   383   Phd
                                            transmembrane     407   424   Phd
                                            transmembrane     407   423   Psort

PG0416    conserved hypothetical            coil-coil         390   424   Coils
          protein(possible ATPase
          component)
                                            coil-coil         650   679   Coils

PG0417    hypothetical protein              coil-coil         62    97    Coils

PG0419    ISPg5-related orf-1               coil-coil         69    106   Coils

PG0420    ISPg1 transposase (IS1106-        transmembrane     58    74    Psort
          related transposase)
                                            non-globular      168   218   SEG

PG0422    conserved hypothetical protein    cleavable signal  1     30    Psort
                                            transmembrane     18    35    Phd
                                            transmembrane     63    83    Phd
                                            transmembrane     63    79    Psort
                                            transmembrane     87    103   Psort
                                            transmembrane     88    106   Phd
                                            transmembrane     133   151   Phd
                                            transmembrane     134   150   Psort
                                            transmembrane     167   183   Psort
                                            transmembrane     170   187   Phd
                                            transmembrane     204   223   Phd
                                            transmembrane     205   221   Psort
                                            transmembrane     256   274   Phd
                                            transmembrane     257   273   Psort
                                            transmembrane     296   313   Phd
                                            transmembrane     300   316   Psort
                                            transmembrane     323   341   Phd
                                            transmembrane     326   342   Psort
                                            transmembrane     346   370   Phd
                                            transmembrane     354   370   Psort
                                            transmembrane     389   410   Phd
                                            transmembrane     393   409   Psort
                                            transmembrane     430   448   Phd
                                            transmembrane     433   449   Psort

PG0424    adenylosuccinate synthetase       transmembrane     395   411   Psort
          (IMP-aspartate ligase) (ADSS)
          (AMPSASE)

PG0425    ferric uptake regulation protein  non-globular      117   166   SEG
          (ferric uptake regulator)

PG0426    conserved hypothetical protein    non-globular      1     102   SEG

PG0428    hypothetical protein              uncleavable       1     22    Psort
                                            signal
                                            gram negative     1     22    SignalP
                                            signal
                                            transmembrane     5     22    Phd
                                            transmembrane     6     22    Psort
                                            transmembrane     36    52    Psort
                                            transmembrane     39    56    Phd

PG0429    conserved hypothetical protein    transmembrane     20    36    Psort
                                            non-globular      55    165   SEG
                                            transmembrane     176   192   Psort
                                            transmembrane     178   195   Phd
                                            non-globular      204   279   SEG

PG0435    yngK-related conserved            may be a                      Psort
          hypothetical protein              lipoprotein

PG0436    pantoate-beta-alanine             transmembrane     158   175   Phd
          ligase/cytidylate kinase
                                            transmembrane     160   176   Psort

PG0437    hypothetical protein              uncleavable       1     30    Psort
                                            signal
                                            gram negative     1     30    SignalP
                                            signal
                                            transmembrane     11    27    Psort

PG0438    precorrin-2 methyltransferase     transmembrane     125   142   Phd
                                            transmembrane     126   142   Psort

PG0439    2-amino-3-ketobutyrate coenzyme   coil-coil         151   178   Coils
          A ligase

PG0442    hypothetical protein              transmembrane     30    47    Phd
                                            transmembrane     30    46    Psort
                                            non-globular      156   230   SEG

PG0443    hypothetical protein              cleavable signal  1     14    Psort
          (uncharacterized secreted
          protein)
                                            transmembrane     19    36    Phd
                                            transmembrane     22    38    Psort

PG0445    ISPg4 transposase                 uncleavable       1     51    Psort
                                            signal
                                            transmembrane     321   337   Psort

PG0446    Holliday Junction DNA helicase    non-globular      39    147   SEG
          (RUVB)

PG0447    conserved hypothetical protein    transmembrane     80    96    Psort
                                            transmembrane     114   130   Psort
                                            transmembrane     146   162   Psort
                                            transmembrane     187   203   Psort
                                            transmembrane     221   237   Psort
                                            transmembrane     260   276   Psort
                                            transmembrane     309   325   Psort
                                            transmembrane     339   355   Psort
                                            transmembrane     373   389   Psort
                                            non-globular      388   493   SEG
                                            transmembrane     397   413   Psort
                                            transmembrane     432   448   Psort
                                            transmembrane     457   473   Psort

PG0448    conserved hypothetical protein    non-globular      1     254   SEG
                                            transmembrane     35    51    Psort
                                            transmembrane     55    71    Psort
                                            transmembrane     93    109   Psort
                                            transmembrane     127   143   Psort
                                            transmembrane     152   168   Psort
                                            transmembrane     187   203   Psort
                                            transmembrane     225   241   Psort
                                            coil-coil         323   362   Coils

PG0449    conserved hypothetical protein    cleavable signal  1     24    Psort
                                            gram negative     1     24    SignalP
                                            signal
                                            transmembrane     62    78    Psort
                                            coil-coil         129   173   Coils
                                            non-globular      421   567   SEG

PG0451    hypothetical protein              cleavable signal  1     15    Psort
                                            transmembrane     19    35    Psort

PG0452    conserved hypothetical protein    cleavable signal  1     26    Psort
                                            gram negative     1     26    SignalP
                                            signal

PG0453    mta/sah nucleosidase              cleavable signal  1     58    Psort
          (phosphorylase-PFS protein)
                                            transmembrane     38    57    Phd
                                            transmembrane     173   191   Phd

PG0455    hypothetical protein              non-globular      1     62    SEG
                                            uncleavable       1     33    Psort
                                            signal
                                            gram negative     1     24    SignalP
                                            signal
                                            transmembrane     10    26    Psort

PG0457    conserved hypothetical protein    uncleavable       1     22    Psort
                                            signal
                                            transmembrane     19    35    Psort
                                            transmembrane     65    81    Psort
                                            transmembrane     110   126   Psort
                                            transmembrane     280   296   Psort
                                            non-globular      280   359   SEG
                                            transmembrane     308   324   Psort
                                            transmembrane     338   354   Psort

PG0459    dipeptidyl peptidase IV (DPP IV)  cleavable signal  1     19    Psort
          N-terminal region
                                            gram negative     1     19    SignalP
                                            signal

PG0461    arginine-specific cysteine        cleavable signal  1     24    Psort
          proteinase: gingipain R2
                                            gram negative     1     24    SignalP
                                            signal
                                            non-globular      605   693   SEG

PG0462    conserved hypothetical            transmembrane     30    47    Phd
          protein(possible phosphoserine
          phosphatase)
                                            transmembrane     31    47    Psort

PG0463    conserved hypothetical            cleavable signal  1     44    Psort
          protein(possible 4-
          hydroxybenzoate
          octaprenyltransferase)
                                            non-globular      1     191   SEG
                                            transmembrane     80    96    Psort
                                            transmembrane     99    115   Psort
                                            transmembrane     126   142   Psort
                                            transmembrane     153   169   Psort
                                            transmembrane     197   213   Psort
                                            transmembrane     270   286   Psort

PG0464    conserved hypothetical protein    coil-coil         84    141   Coils

PG0465    possible spore maturation         cleavable signal  1     57    Psort
          protein
                                            transmembrane     139   155   Psort
                                            non-globular      170   255   SEG
                                            transmembrane     173   189   Psort
                                            transmembrane     205   221   Psort
                                            transmembrane     236   252   Psort
                                            transmembrane     277   293   Psort
                                            transmembrane     391   407   Psort

PG0467    conserved hypothetical            coil-coil         255   296   Coils
          protein(possible yloC)

PG0468    preprotein translocase subunit A  coil-coil         23    99    Coils
          protein
                                            coil-coil         448   475   Coils
                                            coil-coil         1038  1065  Coils

PG0469    conserved hypothetical protein    uncleavable       1     59    Psort
          (possible alkaline phosphatase)   signal
                                            transmembrane     10    26    Psort

PG0470    hypothetical protein              cleavable signal  1     32    Psort
                                            gram negative     1     32    SignalP
                                            signal
                                            transmembrane     277   293   Psort
                                            non-globular      306   415   SEG
                                            transmembrane     306   322   Psort
                                            transmembrane     338   354   Psort
                                            transmembrane     366   382   Psort
                                            transmembrane     386   402   Psort

PG0472    conserved hypothetical protein    cleavable signal  1     58    Psort
          (possible membrane protein)
                                            transmembrane     14    31    Phd
                                            transmembrane     46    63    Phd
                                            transmembrane     88    104   Psort
                                            transmembrane     91    109   Phd
                                            transmembrane     145   162   Phd
                                            transmembrane     146   162   Psort
                                            transmembrane     182   206   Phd
                                            transmembrane     184   200   Psort
                                            transmembrane     211   232   Phd

PG0474    60 kD chaperonin (protein cpn60)  coil-coil         346   375   Coils
          (GroEL protein) (heat shock
          protein 60)
                                            non-globular      376   475   SEG

PG0475    10 kDa chaperonin/heat shock      non-globular      1     89    SEG
          protein (protein cpn10) (protein
          GroES)

PG0479    CTP synthetase (UTP ammonia       uncleavable       1     34    Psort
          ligase)                           signal

PG0480    60 kDa inner membrane protein     non-globular      1     209   SEG
                                            uncleavable       1     49    Psort
                                            signal
                                            transmembrane     6     22    Psort
                                            transmembrane     351   368   Phd
                                            transmembrane     376   393   Phd
                                            transmembrane     378   394   Psort
                                            transmembrane     446   462   Psort
                                            transmembrane     450   467   Phd
                                            transmembrane     504   521   Phd
                                            transmembrane     506   522   Psort
                                            transmembrane     558   575   Phd
                                            coil-coil         582   627   Coils

PG0484    glutamine-hydrolyzing carbamoyl-  uncleavable       1     35    Psort
          phosphate synthase large subunit  signal

PG0485    glutamine-dependent NAD(+)        uncleavable       1     17    Psort
          synthetase                        signal
                                            transmembrane     354   370   Psort

PG0487    conserved hypothetical protein;   cleavable signal  1     36    Psort
          possible outer membrane protein
                                            gram negative     1     36    SignalP
                                            signal
                                            coil-coil         108   140   Coils

PG0488    hypothetical protein              cleavable signal  1     31    Psort
                                            gram negative     1     31    SignalP
                                            signal
                                            coil-coil         62    97    Coils
                                            coil-coil         109   159   Coils

PG0488.1  hypothetical protein              transmembrane     3     19    Psort

PG0490    possible outer membrane protein;  cleavable signal  1     27    Psort
          immunoreactive 52kD antigen PG41
                                            gram negative     1     27    SignalP
                                            signal
                                            coil-coil         392   426   Coils

PG0492    cation efflux membrane fusion     cleavable signal  1     41    Psort
          protein
                                            coil-coil         99    126   Coils

PG0493    cation efflux protein             cleavable signal  1     33    Psort
                                            transmembrane     334   351   Phd
                                            transmembrane     336   352   Psort
                                            transmembrane     356   377   Phd
                                            transmembrane     359   375   Psort
                                            transmembrane     382   399   Phd
                                            transmembrane     382   398   Psort
                                            transmembrane     429   445   Psort
                                            transmembrane     433   451   Phd
                                            transmembrane     460   478   Phd
                                            transmembrane     461   477   Psort
                                            transmembrane     528   544   Psort
                                            transmembrane     529   546   Phd
                                            transmembrane     865   881   Psort
                                            transmembrane     867   884   Phd
                                            transmembrane     893   909   Psort
                                            transmembrane     895   914   Phd
                                            transmembrane     915   931   Psort
                                            transmembrane     919   936   Phd
                                            transmembrane     966   982   Psort
                                            transmembrane     1001  1019  Phd
                                            transmembrane     1004  1020  Psort

PG0494.2  hypothetical protein              uncleavable       1     46    Psort
                                            signal
                                            transmembrane     31    47    Psort

PG0495    conserved hypothetical            non-globular      85    203   SEG
          protein(possible DNA-
          methyltransferase/type I
          restriction enzyme EcoIM)

PG0496    hypothetical protein (possible    non-globular      381   477   SEG
          type I restriction enzyme)

PG0498    pyruvate ferredoxin/flavodoxin    coil-coil         886   920   Coils
          oxidoreductase

PG0499    ISPg1 transposase (IS1106-        transmembrane     58    74    Psort
          related transposase)
                                            non-globular      168   218   SEG

PG0501    lysyl endopeptidase precursor     cleavable signal  1     20    Psort
          (protease I precursor) (API)
                                            gram negative     1     27    SignalP
                                            signal
                                            non-globular      383   458   SEG

PG0502    conserved hypothetical protein    non-globular      1     98    SEG

PG0503    hypothetical protein              uncleavable       1     60    Psort
                                            signal
                                            non-globular      79    134   SEG
                                            coil-coil         245   272   Coils

PG0504    hypothetical protein              transmembrane     25    41    Psort
                                            transmembrane     27    44    Phd
                                            transmembrane     49    66    Phd
                                            transmembrane     51    67    Psort

PG0508    conserved hypothetical protein    non-globular      1     190   SEG
                                            uncleavable       1     20    Psort
                                            signal
                                            transmembrane     21    37    Psort
                                            transmembrane     39    55    Psort
                                            transmembrane     76    92    Psort
                                            transmembrane     104   120   Psort
                                            transmembrane     176   192   Psort
                                            non-globular      288   498   SEG
                                            transmembrane     380   396   Psort
                                            transmembrane     409   425   Psort
                                            transmembrane     441   457   Psort
                                            transmembrane     474   490   Psort
                                            transmembrane     541   557   Psort

PG0509.1  hypothetical protein              transmembrane     40    56    Psort
                                            transmembrane     79    95    Psort

PG0510    hypothetical protein              coil-coil         102   130   Coils

PG0513    conserved hypothetical protein    non-globular      213   266   SEG
                                            non-globular      365   450   SEG

PG0514    aspartate semialdehyde            cleavable signal  1     41    Psort
          dehydrogenase

PG0516    hypothetical protein              transmembrane     64    80    Psort
                                            transmembrane     65    82    Phd

PG0517    penicillin-binding protein        transmembrane     20    37    Phd
                                            transmembrane     20    36    Psort
                                            non-globular      80    133   SEG

PG0519    phospho-N-acetylmuramoyl          non-globular      1     149   SEG
          pentapeptide transferase
                                            transmembrane     25    41    Psort
                                            transmembrane     75    91    Psort
                                            transmembrane     99    115   Psort
                                            transmembrane     141   157   Psort
                                            non-globular      199   294   SEG
                                            transmembrane     208   224   Psort
                                            transmembrane     239   255   Psort
                                            transmembrane     278   294   Psort
                                            transmembrane     307   323   Psort
                                            transmembrane     329   345   Psort
                                            transmembrane     397   413   Psort

PG0520    N-acetylymuramoyl-L-alanine-D-    transmembrane     8     24    Psort
          glutamate ligase

PG0521    cell division protein (ftsW)      uncleavable       1     24    Psort
                                            signal
                                            transmembrane     12    28    Psort
                                            non-globular      39    209   SEG
                                            transmembrane     49    65    Psort
                                            transmembrane     74    90    Psort
                                            transmembrane     115   131   Psort
                                            transmembrane     140   156   Psort
                                            transmembrane     159   175   Psort
                                            transmembrane     186   202   Psort
                                            non-globular      256   386   SEG
                                            transmembrane     295   311   Psort
                                            transmembrane     337   353   Psort
                                            coil-coil         388   418   Coils

PG0522    GLCNAC transferase (UDP-N-        cleavable signal  1     24    Psort
          acetylglucosamine-N-
          acetylmuramyl-(pentapeptide)-
          pyrophosphoryl-undecaprenol
          Nacetylglucosamine transferase)
                                            transmembrane     49    65    Psort
                                            transmembrane     74    90    Psort
                                            non-globular      292   379   SEG

PG0523    UDP-N-acetylmuramate--alanine     cleavable signal  1     25    Psort
          ligase
                                            transmembrane     432   448   Psort

PG0524    cell division protein             cleavable signal  1     20    Psort
                                            gram negative     1     20    SignalP
                                            signal
                                            transmembrane     148   164   Psort

PG0526    cell division protein             transmembrane     127   144   Phd
                                            transmembrane     131   147   Psort
                                            coil-coil         148   198   Coils

PG0529    conserved hypothetical protein    transmembrane     21    45    Phd
                                            transmembrane     39    55    Psort
                                            transmembrane     69    87    Phd
                                            transmembrane     70    86    Psort
                                            transmembrane     92    109   Phd
                                            transmembrane     97    113   Psort
                                            transmembrane     114   134   Phd
                                            transmembrane     148   165   Phd
                                            transmembrane     156   172   Psort
                                            transmembrane     170   194   Phd
                                            transmembrane     176   192   Psort

PG0530    3-methyl-2-oxobutanoate           non-globular      162   235   SEG
          hydroxymethyltransferase

PG0531    GMP synthase                      transmembrane     215   231   Psort
                                            non-globular      323   399   SEG

PG0532    ISPg5-related orf-1               coil-coil         81    112   Coils

PG0535    periplasmic serine protease       cleavable signal  1     27    Psort
                                            gram negative     1     27    SignalP
                                            signal

PG0536    RNA polymerase sigma factor RpoD  coil-coil         30    57    Coils
                                            coil-coil         135   175   Coils
                                            non-globular      188   241   SEG

PG0537    30S ribosomal protein S6          uncleavable       1     19    Psort
                                            signal

PG0540    50S ribosomal protein L9          coil-coil         48    82    Coils
                                            non-globular      93    179   SEG

PG0541    conserved hypothetical protein    cleavable signal  1     26    Psort
          (possible permease)
                                            transmembrane     19    36    Phd
                                            transmembrane     54    74    Phd
                                            transmembrane     61    77    Psort
                                            transmembrane     106   123   Phd
                                            transmembrane     107   123   Psort
                                            non-globular      271   364   SEG
                                            transmembrane     395   412   Phd
                                            transmembrane     396   412   Psort
                                            transmembrane     417   434   Phd
                                            transmembrane     421   437   Psort
                                            transmembrane     451   468   Phd
                                            transmembrane     451   467   Psort
                                            transmembrane     599   616   Phd
                                            transmembrane     599   615   Psort
                                            coil-coil         619   651   Coils

PG0542    GTP cyclohydrolase II /3,4-       non-globular      1     49    SEG
          dihydroxy-2-butanone-4-phoshate
          synthase
                                            non-globular      270   336   SEG

PG0543    conserved hypothetical protein    transmembrane     18    35    Phd
                                            transmembrane     21    37    Psort
                                            transmembrane     229   246   Phd
                                            transmembrane     313   332   Phd

PG0545    penicillin tolerance protein      transmembrane     252   268   Psort

PG0550    possible lipoprotein              may be a                      Psort
                                            lipoprotein
                                            gram negative     1     25    SignalP
                                            signal

PG0551    possible outer membrane-          cleavable signal  1     21    Psort
          associated protein P23
                                            gram negative     1     22    SignalP
                                            signal

PG0552    hypothetical protein              gram negative     1     43    SignalP
                                            signal
                                            transmembrane     28    44    Psort

PG0554    hypothetical protein              cleavable signal  1     15    Psort
                                            gram negative     1     21    SignalP
                                            signal

PG0557    alkyl hydroperoxide reductase     non-globular      41    120   SEG
          subunit F

PG0558    ATP-dependent protease LA         transmembrane     12    28    Psort
                                            coil-coil         521   564   Coils
                                            transmembrane     599   615   Psort
                                            non-globular      669   810   SEG

PG0559    conserved hypothetical protein    transmembrane     72    88    Psort

PG0560    conserved hypothetical protein    cleavable signal  1     25    Psort
                                            transmembrane     53    69    Psort
                                            transmembrane     54    73    Phd
                                            transmembrane     78    97    Phd
                                            transmembrane     82    98    Psort
                                            transmembrane     114   131   Phd
                                            transmembrane     118   134   Psort
                                            transmembrane     150   166   Psort
                                            transmembrane     152   170   Phd
                                            transmembrane     384   400   Psort
                                            transmembrane     386   405   Phd

PG0561    triosephosphate isomerase         transmembrane     39    56    Phd
                                            transmembrane     39    55    Psort

PG0562    conserved hypothetical protein    cleavable signal  1     22    Psort
                                            gram negative     1     22    SignalP
                                            signal

PG0564    hypothetical protein              uncleavable       1     53    Psort
                                            signal
                                            gram negative     1     28    SignalP
                                            signal
                                            transmembrane     12    28    Psort

PG0570    conserved hypothetical protein    cleavable signal  1     15    Psort
          (probable biopolymer transport)
                                            non-globular      66    204   SEG
                                            transmembrane     106   122   Psort
                                            transmembrane     155   171   Psort

PG0571    possible biopolymer transport     cleavable signal  1     34    Psort
          protein
                                            transmembrane     20    37    Phd

PG0573    hypothetical protein              cleavable signal  1     34    Psort
                                            non-globular      35    103   SEG
                                            coil-coil         105   147   Coils
                                            non-globular      149   275   SEG

PG0575    conserved hypothetical protein    cleavable signal  1     21    Psort
          (probable 4-methyl-5(b-
          hydroxyethyl)-thiazole
          monophosphate biosynthesis
          protein)
                                            transmembrane     131   147   Psort

PG0576    ribosomal protein L11             non-globular      164   311   SEG
          methyltransferase

PG0577    DNA damage-inducible protein      transmembrane     23    40    Phd
                                            transmembrane     50    67    Phd
                                            transmembrane     51    67    Psort
                                            transmembrane     99    115   Psort
                                            transmembrane     102   122   Phd
                                            transmembrane     137   158   Phd
                                            transmembrane     163   181   Phd
                                            transmembrane     174   190   Psort
                                            transmembrane     186   210   Phd
                                            transmembrane     196   212   Psort
                                            transmembrane     243   260   Phd
                                            transmembrane     244   260   Psort
                                            transmembrane     290   307   Phd
                                            transmembrane     320   338   Phd
                                            transmembrane     321   337   Psort
                                            transmembrane     360   384   Phd
                                            transmembrane     390   409   Phd
                                            transmembrane     392   408   Psort
                                            transmembrane     414   434   Phd
                                            transmembrane     420   436   Psort

PG0580    protein protease                  cleavable signal  1     37    Psort
          IV/endopeptidase
                                            coil-coil         83    129   Coils
                                            coil-coil         253   284   Coils
                                            non-globular      304   355   SEG
                                            non-globular      469   564   SEG

PG0582    tonB-linked receptor Tlr          transmembrane     34    53    Phd
                                            transmembrane     36    52    Psort
                                            coil-coil         236   269   Coils

PG0583    conserved hypothetical            non-globular      137   183   SEG
          protein/possible htrD protein

PG0585    permease protein (probable hemin  cleavable signal  1     20    Psort
          permease, htrB)
                                            gram negative     1     20    SignalP
                                            signal
                                            transmembrane     61    78    Phd
                                            transmembrane     95    114   Phd
                                            transmembrane     99    115   Psort
                                            transmembrane     130   146   Psort
                                            transmembrane     131   151   Phd
                                            transmembrane     156   174   Phd
                                            transmembrane     156   172   Psort
                                            transmembrane     179   196   Phd
                                            transmembrane     201   218   Phd
                                            transmembrane     201   217   Psort
                                            transmembrane     244   260   Psort
                                            transmembrane     248   272   Phd
                                            transmembrane     286   302   Psort
                                            transmembrane     289   306   Phd
                                            transmembrane     314   330   Psort
                                            transmembrane     315   332   Phd

PG0586    probable htrA protein (ABC        cleavable signal  1     16    Psort
          solute binding protein)
                                            coil-coil         219   246   Coils

PG0588    conserved hypothetical protein    coil-coil         90    117   Coils

PG0592    hypothetical protein              cleavable signal  1     17    Psort
                                            gram negative     1     21    SignalP
                                            signal

PG0593    MAF protein                       transmembrane     82    98    Psort
          (MAF/YMDE/YCEFrelated)

PG0595    conserved hypothetical protein    non-globular      1     94    SEG

PG0596    NADPH-oxidoreductase              transmembrane     70    86    Psort

PG0597    oxidoreductase                    transmembrane     22    44    Phd
                                            transmembrane     32    48    Psort

PG0598    beta-galactosidase                non-globular      241   303   SEG

PG0600.1  hypothetical protein              uncleavable       1     26    Psort
                                            signal
                                            transmembrane     17    33    Psort

PG0601    tonB-linked outer membrane        cleavable signal  1     25    Psort
          receptor PG13
                                            gram negative     1     23    SignalP
                                            signal

PG0602    heme-binding protein/peripheral   cleavable signal  1     15    Psort
          outer membrane chelatase
                                            gram negative     1     23    SignalP
                                            signal

PG0603    possible ferrichrome-binding      may be a                      Psort
          periplasmic protein               lipoprotein

PG0604    probable iron transport protein   uncleavable       1     28    Psort
                                            signal
                                            transmembrane     10    26    Psort
                                            non-globular      71    291   SEG
                                            transmembrane     102   118   Psort
                                            transmembrane     141   157   Psort
                                            transmembrane     168   184   Psort
                                            transmembrane     215   231   Psort
                                            transmembrane     256   272   Psort
                                            transmembrane     298   314   Psort
                                            transmembrane     329   345   Psort

PG0605    ABC transport system component;   cleavable signal  1     28    Psort
          ATP-binding protein (probable
          ferric enterobactin transport
          ATP-binding protein)

PG0606    indolepyruvate ferredoxin         cleavable signal  1     28    Psort
          oxidoreductase beta subunit

PG0608    short-chain dehydrogenase         non-globular      1     74    SEG
                                            uncleavable       1     18    Psort
                                            signal
                                            gram negative     1     19    SignalP
                                            signal

PG0609    conserved hypothetical protein;   uncleavable       1     38    Psort
          possible saccharopine             signal
          dehydrogenase
                                            transmembrane     4     20    Psort

PG0611    conserved hypothetical protein;   cleavable signal  1     17    Psort
          possible outer membrane protein
                                            gram negative     1     23    SignalP
                                            signal
                                            non-globular      109   290   SEG
                                            non-globular      339   380   SEG
                                            coil-coil         391   426   Coils

PG0612    membrane permease                 cleavable signal  1     36    Psort
                                            gram negative     1     33    SignalP
                                            signal
                                            coil-coil         137   170   Coils
                                            coil-coil         209   236   Coils

PG0612.1  hypothetical protein              uncleavable       1     45    Psort
                                            signal

PG0614    hypothetical protein (possible    uncleavable       1     38    Psort
          ABC transmembrane spanning        signal
          domains)
                                            transmembrane     16    33    Phd
                                            transmembrane     16    32    Psort
                                            transmembrane     283   300   Phd
                                            transmembrane     283   299   Psort
                                            transmembrane     332   349   Phd
                                            transmembrane     336   352   Psort
                                            transmembrane     371   395   Phd
                                            transmembrane     374   390   Psort
                                            transmembrane     423   440   Phd
                                            transmembrane     428   444   Psort
                                            transmembrane     660   676   Psort
                                            transmembrane     662   679   Phd
                                            transmembrane     713   730   Phd
                                            transmembrane     749   766   Phd
                                            transmembrane     753   769   Psort

PG0615    possible permease (ABC            transmembrane     16    32    Psort
          transmembrane spanning domains)
                                            non-globular      254   385   SEG
                                            transmembrane     273   289   Psort
                                            transmembrane     328   344   Psort
                                            transmembrane     368   384   Psort
                                            transmembrane     414   430   Psort
                                            transmembrane     665   681   Psort
                                            non-globular      717   788   SEG
                                            transmembrane     753   769   Psort

PG0616    hypothetical protein/possible     transmembrane     24    41    Phd
          ABC element with MSD domain
                                            transmembrane     24    40    Psort
                                            transmembrane     285   302   Phd
                                            transmembrane     286   302   Psort
                                            transmembrane     334   351   Phd
                                            transmembrane     336   352   Psort
                                            transmembrane     370   388   Phd
                                            transmembrane     373   389   Psort
                                            transmembrane     420   437   Phd
                                            transmembrane     420   436   Psort
                                            transmembrane     669   686   Phd
                                            transmembrane     669   685   Psort
                                            transmembrane     720   737   Phd
                                            transmembrane     723   739   Psort
                                            transmembrane     756   774   Phd
                                            transmembrane     758   774   Psort

PG0620    conserved hypothetical protein    coil-coil         18    48    Coils
                                            coil-coil         172   208   Coils

PG0621    aldehyde dehydrogenase            transmembrane     113   131   Phd
          (succinate semialdehyde
          dehydrogenase (NADP+))
                                            transmembrane     176   192   Psort
                                            transmembrane     369   386   Phd

PG0622    iron-containing alcohol           transmembrane     82    99    Phd
          dehydrogenase
                                            transmembrane     170   187   Phd
                                            transmembrane     238   255   Phd

PG0625    4-hydroxyphenylacetate-3-         transmembrane     298   314   Psort
          hydroxylase

PG0626    outer membrane protein            cleavable signal  1     21    Psort
                                            gram negative     1     21    SignalP
                                            signal

PG0627    outer membrane protein            cleavable signal  1     20    Psort
                                            gram negative     1     20    SignalP
                                            signal

PG0628    possible lipoprotein              cleavable signal  1     26    Psort
                                            gram negative     1     26    SignalP
                                            signal
                                            transmembrane     97    113   Psort

PG0630    hypothetical protein              uncleavable       1     15    Psort
                                            signal
                                            transmembrane     118   134   Psort

PG0632    probable nicotinate-nucleotide--  transmembrane     250   267   Phd
          dimethylbenzimidazole
          phosphoribosyltransferase
                                            transmembrane     253   269   Psort
                                            transmembrane     314   330   Psort
                                            transmembrane     316   333   Phd

PG0633    cobalamin (5`-phosphate)          uncleavable       1     51    Psort
          synthase                          signal
                                            transmembrane     12    28    Psort
                                            transmembrane     46    70    Phd
                                            transmembrane     59    75    Psort
                                            transmembrane     119   143   Phd
                                            transmembrane     119   135   Psort
                                            transmembrane     140   156   Psort
                                            transmembrane     179   196   Phd
                                            transmembrane     184   200   Psort
                                            transmembrane     201   218   Phd
                                            transmembrane     208   224   Psort
                                            transmembrane     238   254   Psort
                                            transmembrane     239   256   Phd

PG0636    hypothetical protein              may be a                      Psort
                                            lipoprotein
                                            gram negative     1     30    SignalP
                                            signal

PG0637    outer membrane protein, TonB      cleavable signal  1     21    Psort
          dependent receptor
                                            gram negative     1     21    SignalP
                                            signal
                                            non-globular      382   440   SEG

PG0639    fkbP-type peptidyl-prolyl cis-    cleavable signal  1     24    Psort
          trans isomerase
                                            gram negative     1     19    SignalP
                                            signal
                                            coil-coil         131   164   Coils

PG0640    fkbP-type peptidyl-prolyl cis-    cleavable signal  1     17    Psort
          trans isomerase (MIP-like
          protein)
                                            gram negative     1     17    SignalP
                                            signal

PG0641    fkbP-type peptidyl-prolyl cis-    coil-coil         46    73    Coils
          trans isomerase (MIP-like
          protein)

PG0644    possible copper homeostasis       transmembrane     43    59    Psort
          protein

PG0645    possible magnesium and cobalt     transmembrane     127   144   Phd
          transport protein
                                            transmembrane     250   266   Psort
                                            transmembrane     251   268   Phd
                                            transmembrane     280   297   Phd
                                            transmembrane     283   299   Psort

PG0647    conserved hypothetical protein    may be a                      Psort
                                            lipoprotein
                                            gram negative     1     22    SignalP
                                            signal

PG0648    hypothetical protein              uncleavable       1     20    Psort
                                            signal
                                            gram negative     1     20    SignalP
                                            signal
                                            transmembrane     6     22    Psort

PG0649    probable sensor histidine kinase  cleavable signal  1     20    Psort
          (histidine kinase sensor
          protein)
                                            transmembrane     137   153   Psort
                                            transmembrane     141   158   Phd

PG0650    response regulator                coil-coil         81    118   Coils

PG0651    conserved hypothetical protein    cleavable signal  1     25    Psort
                                            gram negative     1     27    SignalP
                                            signal

PG0654    possible lipoprotein              may be a                      Psort
                                            lipoprotein
                                            gram negative     1     26    SignalP
                                            signal
                                            transmembrane     90    106   Psort

PG0656    D-alanine-D-alanine ligase        uncleavable       1     23    Psort
                                            signal

PG0658    ribosomal large subunit           uncleavable       1     17    Psort
          pseudouridine synthase D          signal
          (pseudouridylate synthase)
          (uracil hydrolyase)
                                            non-globular      69    153   SEG

PG0659    conserved hypothetical protein    uncleavable       1     24    Psort
                                            signal
                                            gram negative     1     33    SignalP
                                            signal
                                            transmembrane     16    34    Phd
                                            transmembrane     16    32    Psort

PG0660    hypothetical protein              transmembrane     43    60    Phd
                                            transmembrane     43    59    Psort

PG0663    possible nifS-like                coil-coil         39    74    Coils
          aminotransferase

PG0667    tRNaseZ                           non-globular      51    105   SEG
                                            coil-coil         234   265   Coils

PG0669    conserved hypothetical protein    uncleavable       1     29    Psort
          (lipoprotein)                     signal

PG0674    probable sensory transduction     cleavable signal  1     35    Psort
          histidine kinase
                                            gram negative     1     35    SignalP
                                            signal
                                            transmembrane     21    38    Phd
                                            transmembrane     48    64    Psort
                                            transmembrane     50    68    Phd
                                            non-globular      98    190   SEG
                                            transmembrane     126   142   Psort

PG0675    two-component sensor system       cleavable signal  1     35    Psort
          regulatory subunit (ATOC-like,
          NTRC-like) (acetoacetate
          metabolism regulatory protein)
          (ornithine/arginine
          decarboxylase inhibitor)
          (ornithine decarboxylase
          antizyme)
                                            transmembrane     48    64    Psort
                                            transmembrane     106   122   Psort
                                            transmembrane     185   201   Psort

PG0676    glycosyltransferase               uncleavable       1     32    Psort
                                            signal

PG0677    porT protein                      cleavable signal  1     31    Psort
                                            gram negative     1     28    SignalP
                                            signal

PG0679    prtQ protein                      transmembrane     160   176   Psort

PG0680    DNA topoisomerase I               non-globular      103   209   SEG
                                            non-globular      734   788   SEG

PG0682    conserved hypothetical protein    coil-coil         33    205   Coils
                                            coil-coil         262   291   Coils
                                            coil-coil         356   429   Coils

PG0683    conserved hypothetical protein    cleavable signal  1     27    Psort
                                            gram negative     1     24    SignalP
                                            signal
                                            transmembrane     6     23    Phd
                                            transmembrane     37    54    Phd
                                            transmembrane     39    55    Psort
                                            transmembrane     70    93    Phd
                                            transmembrane     73    89    Psort
                                            transmembrane     109   127   Phd
                                            transmembrane     166   184   Phd
                                            transmembrane     189   206   Phd
                                            transmembrane     191   207   Psort

PG0684    peptidyl dipeptidase              non-globular      158   236   SEG
          (oligopeptidase A)

PG0685    hypothetical protein              non-globular      467   538   SEG

PG0686    ISPG1 transposase fragment        non-globular      36    133   SEG
          (IS1106-related transposase)
                                            coil-coil         182   211   Coils

PG0687    trigger factor (peptidyl prolyl   transmembrane     108   124   Psort
          cis-trans isomerase)
                                            coil-coil         403   439   Coils

PG0689    ISPg1 transposase fragment        non-globular      35    133   SEG
          (IS1106-related transposase)

PG0690    polyribonucleotide                transmembrane     31    47    Psort
          nucleotidyltransferase
          (polynucleotide phosphorylase)
                                            non-globular      242   328   SEG
                                            non-globular      558   743   SEG

PG0691    4-alpha-glucanotransferase        cleavable signal  1     38    Psort
          (amylomaltase)
                                            non-globular      76    145   SEG
                                            transmembrane     482   498   Psort

PG0692    conserved hypothetical protein    uncleavable       1     19    Psort
                                            signal
                                            gram negative     1     18    SignalP
                                            signal
                                            transmembrane     4     20    Psort

PG0695    hypothetical protein              cleavable signal  1     23    Psort

PG0698    electron transfer flavoprotein    non-globular      51    155   SEG
          beta subunit

PG0699    possible glycoprotein             transmembrane     17    34    Phd
          endopeptidase
                                            transmembrane     46    64    Phd
                                            transmembrane     84    101   Phd
                                            transmembrane     87    103   Psort
                                            transmembrane     183   200   Phd

PG0700    conserved hypothetical protein    transmembrane     21    37    Psort

PG0701    hypothetical protein              cleavable signal  1     32    Psort

PG0702    conserved hypothetical protein    cleavable signal  1     57    Psort
                                            transmembrane     13    30    Phd
                                            transmembrane     50    67    Phd
                                            transmembrane     82    98    Psort
                                            transmembrane     84    101   Phd
                                            transmembrane     130   147   Phd
                                            transmembrane     134   150   Psort

PG0703    probable biopolymer transport     cleavable signal  1     24    Psort
          (tolQ) protein
                                            gram negative     1     24    SignalP
                                            signal
                                            non-globular      25    59    SEG
                                            transmembrane     75    91    Psort
                                            transmembrane     78    95    Phd
                                            transmembrane     175   193   Phd
                                            transmembrane     176   192   Psort
                                            transmembrane     217   238   Phd
                                            transmembrane     219   235   Psort

PG0705    bifunctional short isoprenyl      transmembrane     171   187   Psort
          diphosphate synthase

PG0707    hypothetical protein (possible    cleavable signal  1     28    Psort
          tonB domain)
                                            non-globular      1     161   SEG

PG0709    conserved hypothetical protein    uncleavable       1     32    Psort
                                            signal
                                            transmembrane     14    30    Psort
                                            non-globular      96    176   SEG

PG0711    GTP-binding protein               transmembrane     155   171   Psort
                                            coil-coil         253   280   Coils
                                            non-globular      318   394   SEG

PG0712    adenylate kinase                  cleavable signal  1     18    Psort

PG0713    hypoxanthine-guanine              transmembrane     41    57    Psort
          phosphoribosyltransferase

PG0714    fructose-1,6-bisphosphatase       coil-coil         92    126   Coils

PG0715    penicillin-binding protein 1      cleavable signal  1     33    Psort
                                            transmembrane     15    33    Phd

PG0716    conserved hypothetical protein    transmembrane     29    45    Psort
                                            transmembrane     30    54    Phd
                                            transmembrane     58    74    Psort
                                            transmembrane     59    79    Phd
                                            transmembrane     84    108   Phd
                                            transmembrane     91    107   Psort
                                            transmembrane     113   130   Phd
                                            transmembrane     113   129   Psort
                                            transmembrane     142   159   Phd
                                            transmembrane     144   160   Psort
                                            transmembrane     164   182   Phd
                                            transmembrane     169   185   Psort
                                            transmembrane     209   225   Psort
                                            transmembrane     211   228   Phd

PG0717    leucyl-tRNA synthetase            non-globular      280   363   SEG
                                            transmembrane     818   834   Psort

PG0718    ISPg3 (IS195) transposase         coil-coil         220   251   Coils

PG0719    probable NAD(FAD)-dependent       non-globular      45    155   SEG
          dehydrogenase
                                            transmembrane     84    100   Psort

PG0720    poly(A) polymerase/tRNA           non-globular      113   199   SEG
          nucleotidyltransferase

PG0721    pyruvate dehydrogenase E3         non-globular      1     73    SEG
          component(dihydrolipoamide
          dehydrogenase)
                                            transmembrane     174   190   Psort
                                            transmembrane     175   192   Phd
                                            transmembrane     403   420   Phd

PG0724    prolipoprotein diacylglyceryl     transmembrane     18    37    Phd
          transferase
                                            transmembrane     23    39    Psort
                                            transmembrane     60    77    Phd
                                            transmembrane     101   118   Phd
                                            transmembrane     130   147   Phd
                                            transmembrane     187   203   Psort
                                            transmembrane     188   205   Phd
                                            transmembrane     215   232   Phd
                                            transmembrane     216   232   Psort
                                            transmembrane     255   272   Phd
                                            transmembrane     258   274   Psort

PG0726    hypothetical protein with         non-globular      1     123   SEG
          conserved nusB domain
                                            non-globular      154   252   SEG

PG0728    gingipains secretion              cleavable signal  1     37    Psort
                                            gram negative     1     33    SignalP
                                            signal

PG0729    Holliday junction DNA helicase    uncleavable       1     36    Psort
          RuvA                              signal

PG0732    ISPg1 fragment (IS1106-related    transmembrane     57    73    Psort
          transposase fragment)
                                            non-globular      168   214   SEG

PG0733    hypothetical protein              transmembrane     45    63    Phd
                                            transmembrane     45    61    Psort
                                            transmembrane     70    86    Psort
                                            transmembrane     84    108   Phd
                                            transmembrane     98    114   Psort

PG0736    Tn5520-like integrase (transfer   coil-coil         61    88    Coils
          factor)

PG0739.1  conserved hypothetical protein    transmembrane     54    70    Psort
                                            transmembrane     84    100   Psort
                                            transmembrane     154   170   Psort
                                            transmembrane     187   203   Psort

PG0740    ISPg1 transposase (IS1106-        transmembrane     58    74    Psort
          related transposase)
                                            non-globular      138   235   SEG
                                            coil-coil         284   313   Coils

PG0742    conserved hypothetical membrane   uncleavable       1     39    Psort
          protein                           signal
                                            non-globular      1     159   SEG
                                            transmembrane     21    37    Psort
                                            transmembrane     50    66    Psort
                                            transmembrane     96    112   Psort
                                            transmembrane     141   157   Psort
                                            transmembrane     169   185   Psort
                                            transmembrane     199   215   Psort
                                            transmembrane     241   257   Psort
                                            transmembrane     274   290   Psort
                                            transmembrane     323   339   Psort
                                            transmembrane     394   410   Psort
                                            transmembrane     419   435   Psort

PG0744    hypothetical protein              coil-coil         129   158   Coils

PG0745    hypothetical protein (possible    non-globular      1     73    SEG
          TraB protein)

PG0747    conserved hypothetical protein    coil-coil         190   238   Coils
                                            coil-coil         263   317   Coils
                                            non-globular      319   420   SEG

PG0747.1  hypothetical protein              uncleavable       1     43    Psort
                                            signal

PG0750.1  hypothetical protein              cleavable signal  1     23    Psort
                                            gram negative     1     26    SignalP
                                            signal

PG0751    hypothetical protein              uncleavable       1     15    Psort
                                            signal
                                            coil-coil         100   131   Coils

PG0752    conserved hypothetical protein    non-globular      220   307   SEG

PG0754    hypothetical protein              transmembrane     62    78    Psort

PG0756    ISPg1 transposase fragment        non-globular      36    133   SEG
          (IS1106-related transposase)
                                            coil-coil         182   211   Coils

PG0758    conserved hypothetical protein    coil-coil         233   297   Coils
                                            non-globular      424   526   SEG

PG0760    hypothetical protein              non-globular      163   256   SEG

PG0762    hypothetical protein              transmembrane     229   246   Phd
                                            transmembrane     229   245   Psort

PG0763    ISPg1 transposase fragment        non-globular      36    133   SEG
          (IS1106-related transposase)
                                            coil-coil         182   211   Coils

PG0766    conserved hypothetical protein    transmembrane     147   164   Phd
                                            coil-coil         231   260   Coils
                                            transmembrane     276   295   Phd
                                            transmembrane     285   301   Psort

PG0768    conserved hypothetical protein    transmembrane     85    101   Psort
          (possible hip protein)

PG0770    hypothetical protein              coil-coil         1     35    Coils

PG0771    superfamily II  helicase          coil-coil         691   748   Coils
                                            non-globular      750   848   SEG
                                            coil-coil         927   961   Coils
                                            non-globular      1020  1160  SEG

PG0772    probable type II DNA              coil-coil         149   176   Coils
          modification enzyme
          (methyltransferase)
                                            coil-coil         589   653   Coils

PG0774    resolvase                         non-globular      96    206   SEG

PG0775    ISPg2 (PGIS2) transposase         transmembrane     22    38    Psort
                                            coil-coil         43    70    Coils
                                            non-globular      331   376   SEG

PG0777    hypothetical protein              coil-coil         1     28    Coils
                                            coil-coil         42    76    Coils
                                            transmembrane     128   145   Phd
                                            transmembrane     128   144   Psort
                                            coil-coil         191   231   Coils

PG0778    transposon, MocA                  cleavable signal  1     40    Psort

PG0780    conserved protein associated      coil-coil         299   340   Coils
          with transposition

PG0781    conserved hypothetical protein    transmembrane     50    67    Phd
                                            transmembrane     51    67    Psort
                                            transmembrane     339   356   Phd
                                            transmembrane     344   360   Psort
                                            non-globular      361   458   SEG

PG0782.1  hypothetical protein              cleavable signal  1     16    Psort

PG0783    hypothetical protein              uncleavable       1     43    Psort
                                            signal
                                            transmembrane     11    27    Psort
                                            transmembrane     15    32    Phd
                                            transmembrane     42    66    Phd
                                            transmembrane     55    71    Psort

PG0786    thiophene and furan oxidation     transmembrane     55    71    Psort
          protein (GTPase)
                                            non-globular      199   271   SEG
                                            non-globular      437   518   SEG

PG0787.1  hypothetical protein              transmembrane     77    93    Psort

PG0789    recA protein                      coil-coil         306   340   Coils

PG0791    possible virulence-modulating     coil-coil         422   453   Coils
          gene, VimE

PG0793    phospho-2-dehydro-3-              non-globular      235   296   SEG
          deoxyheptonate aldolase
          (chorismate mutase) (phospho-2-
          keto-3-deoxyheptonate aldolase)
          (3-deoxy-D-arabino-
          heptulosonate-7-phosphate
          synthase)

PG0796    alkaline phosphatase              cleavable signal  1     24    Psort
                                            gram negative     1     24    SignalP
                                            signal

PG0797    prismane protein; hybrid cluster  transmembrane     34    50    Psort
          protein
                                            transmembrane     497   513   Psort

PG0802    cytochrome d oxidase subunit II   uncleavable       1     29    Psort
                                            signal
                                            transmembrane     11    27    Psort
                                            transmembrane     12    29    Phd
                                            transmembrane     56    73    Phd
                                            transmembrane     78    97    Phd
                                            transmembrane     84    100   Psort
                                            transmembrane     119   135   Psort
                                            transmembrane     121   144   Phd
                                            transmembrane     183   200   Phd
                                            transmembrane     185   201   Psort
                                            transmembrane     223   241   Phd
                                            transmembrane     224   240   Psort
                                            transmembrane     268   287   Phd
                                            transmembrane     269   285   Psort
                                            transmembrane     300   316   Psort
                                            transmembrane     301   318   Phd
                                            transmembrane     348   367   Phd
                                            transmembrane     348   364   Psort

PG0803    cytochrome d oxidase subunit I    transmembrane     22    38    Psort
                                            transmembrane     60    76    Psort
                                            transmembrane     102   118   Psort
                                            transmembrane     133   149   Psort
                                            transmembrane     194   210   Psort
                                            transmembrane     224   240   Psort
                                            transmembrane     416   432   Psort
                                            transmembrane     444   460   Psort
                                            transmembrane     494   510   Psort

PG0804    hypothetical protein              transmembrane     31    52    Phd
                                            transmembrane     35    51    Psort

PG0805    conserved hypothetical protein    uncleavable       1     20    Psort
          (immunoreactive 89kD antigen      signal
          PG87)
                                            transmembrane     3     19    Psort

PG0809    hypothetical protein              may be a                      Psort
                                            lipoprotein
                                            gram negative     1     18    SignalP
                                            signal
                                            non-globular      17    150   SEG

PG0811    conserved hypothetical protein    transmembrane     65    82    Phd
                                            transmembrane     67    83    Psort
                                            non-globular      87    183   SEG
                                            transmembrane     319   336   Phd
                                            transmembrane     319   335   Psort

PG0813    conserved hypothetical protein    uncleavable       1     43    Psort
                                            signal
                                            transmembrane     16    32    Psort
                                            transmembrane     19    36    Phd
                                            non-globular      38    68    SEG
                                            transmembrane     99    116   Phd
                                            transmembrane     100   116   Psort
                                            transmembrane     127   144   Phd
                                            transmembrane     169   185   Psort
                                            transmembrane     172   190   Phd
                                            transmembrane     190   206   Psort
                                            transmembrane     195   212   Phd
                                            transmembrane     261   285   Phd
                                            transmembrane     277   293   Psort
                                            transmembrane     290   307   Phd
                                            transmembrane     316   332   Psort
                                            transmembrane     319   337   Phd
                                            transmembrane     347   364   Phd
                                            transmembrane     351   367   Psort
                                            transmembrane     377   394   Phd
                                            transmembrane     399   420   Phd
                                            transmembrane     403   419   Psort
                                            transmembrane     438   456   Phd
                                            transmembrane     476   493   Phd
                                            transmembrane     477   493   Psort

PG0815    hypothetical protein              uncleavable       1     16    Psort
                                            signal
                                            gram negative     1     26    SignalP
                                            signal
                                            transmembrane     6     22    Psort
                                            transmembrane     7     24    Phd
                                            coil-coil         26    95    Coils

PG0817    conserved hypothetical protein    transmembrane     15    31    Psort
                                            transmembrane     17    34    Phd
                                            transmembrane     41    58    Phd
                                            transmembrane     74    91    Phd
                                            transmembrane     76    92    Psort
                                            transmembrane     107   124   Phd

PG0818    hypothetical protein              coil-coil         151   183   Coils

PG0821    conserved hypothetical protein    cleavable signal  1     38    Psort
                                            gram negative     1     40    SignalP
                                            signal
                                            transmembrane     25    46    Phd
                                            transmembrane     143   162   Phd
                                            transmembrane     168   186   Phd
                                            transmembrane     275   298   Phd
                                            transmembrane     280   296   Psort
                                            transmembrane     332   349   Phd
                                            transmembrane     334   350   Psort
                                            transmembrane     354   371   Phd
                                            transmembrane     374   390   Psort
                                            transmembrane     376   393   Phd

PG0824    acid phosphatase                  may be a                      Psort
                                            lipoprotein
                                            gram negative     1     27    SignalP
                                            signal

PG0825    thymidine kinase                  non-globular      83    145   SEG

PG0827    two-component response regulator  coil-coil         157   195   Coils

PG0828    hypothetical protein              non-globular      1     160   SEG

PG0829    hypothetical protein              transmembrane     27    43    Psort

PG0831    DNA polymerase III gamma/tau      transmembrane     394   410   Psort
          subunit

PG0832    translation elongation factor G   coil-coil         199   226   Coils
          protein

PG0834    isopentenyl monophosphate kinase  transmembrane     124   140   Psort
                                            transmembrane     127   144   Phd
                                            transmembrane     159   177   Phd

PG0835    conserved hypothetical protein    transmembrane     21    37    Psort
          (possible sulfate permease)
                                            transmembrane     26    43    Phd
                                            transmembrane     54    72    Phd
                                            transmembrane     55    71    Psort
                                            transmembrane     77    97    Phd
                                            transmembrane     102   119   Phd
                                            transmembrane     103   119   Psort
                                            transmembrane     134   158   Phd
                                            transmembrane     141   157   Psort
                                            transmembrane     163   187   Phd
                                            transmembrane     172   188   Psort
                                            transmembrane     192   212   Phd
                                            transmembrane     198   214   Psort
                                            transmembrane     241   263   Phd
                                            transmembrane     248   264   Psort
                                            transmembrane     290   307   Phd
                                            transmembrane     327   349   Phd
                                            transmembrane     328   344   Psort
                                            transmembrane     351   367   Psort
                                            transmembrane     354   371   Phd
                                            transmembrane     376   392   Psort
                                            transmembrane     381   405   Phd
                                            transmembrane     394   410   Psort
                                            transmembrane     414   431   Phd
                                            transmembrane     417   433   Psort

PG0836    probable integral outer membrane  cleavable signal  1     19    Psort
          protein P26
                                            gram negative     1     19    SignalP
                                            signal

PG0838    calcium ion-transporting ATPase   non-globular      1     117   SEG
                                            transmembrane     201   218   Phd
                                            transmembrane     202   218   Psort
                                            transmembrane     233   250   Phd
                                            transmembrane     235   251   Psort
                                            transmembrane     401   418   Phd
                                            transmembrane     403   419   Psort
                                            transmembrane     428   447   Phd
                                            transmembrane     434   450   Psort
                                            coil-coil         621   656   Coils
                                            transmembrane     835   852   Phd
                                            transmembrane     837   853   Psort
                                            transmembrane     909   926   Phd
                                            transmembrane     909   925   Psort
                                            transmembrane     956   972   Psort
                                            transmembrane     962   979   Phd
                                            transmembrane     999   1016  Phd
                                            transmembrane     999   1015  Psort
                                            transmembrane     1026  1043  Phd
                                            transmembrane     1026  1042  Psort

PG0839    ISPg1 transposase fragment        non-globular      36    133   SEG
          (IS1106-related transposase)

PG0840    ISPg5-related orf-1               coil-coil         81    112   Coils

PG0842    ISPg1 fragment (IS1126-related    transmembrane     57    73    Psort
          transposase fragment)

PG0843    ABC transporter, permease         cleavable signal  1     55    Psort
          protein
                                            transmembrane     25    42    Phd
                                            coil-coil         73    106   Coils
                                            transmembrane     183   200   Phd
                                            transmembrane     185   201   Psort
                                            transmembrane     238   259   Phd
                                            transmembrane     242   258   Psort
                                            transmembrane     302   326   Phd
                                            transmembrane     308   324   Psort
                                            transmembrane     343   359   Psort
                                            transmembrane     344   361   Phd
                                            transmembrane     370   387   Phd
                                            transmembrane     370   386   Psort
                                            transmembrane     398   414   Psort
                                            transmembrane     401   418   Phd

PG0846    AMP nucleosidase                  transmembrane     73    91    Phd
                                            transmembrane     189   206   Phd

PG0848    glycine cleavage H protein        non-globular      1     85    SEG
          (glycine decarboxylase
          component)

PG0850    phosphoribosylaminoimidazole      cleavable signal  1     44    Psort
          carboxylase
                                            transmembrane     60    76    Psort
                                            transmembrane     62    81    Phd
                                            transmembrane     97    113   Psort
                                            transmembrane     104   121   Phd
                                            coil-coil         130   168   Coils

PG0853    conserved hypothetical protein    cleavable signal  1     21    Psort
                                            gram negative     1     20    SignalP
                                            signal
                                            non-globular      380   495   SEG

PG0854    hypothetical protein              transmembrane     40    56    Psort
                                            transmembrane     41    58    Phd
                                            transmembrane     125   142   Phd

PG0855    conserved hypothetical protein    cleavable signal  1     24    Psort
          (possible membrane protein)
                                            gram negative     1     24    SignalP
                                            signal
                                            coil-coil         30    131   Coils
                                            coil-coil         157   267   Coils
                                            transmembrane     354   370   Psort

PG0857    BN ribonuclease                   transmembrane     32    48    Psort
                                            transmembrane     88    104   Psort
                                            transmembrane     128   144   Psort
                                            non-globular      132   228   SEG
                                            transmembrane     170   186   Psort
                                            transmembrane     204   220   Psort
                                            transmembrane     241   257   Psort
                                            transmembrane     285   301   Psort

PG0858    ATP-binding protein, Mrp/Nbp35    non-globular      33    146   SEG
          family
                                            transmembrane     229   245   Psort

PG0860    hypothetical protein              non-globular      1     109   SEG

PG0861    prolyl-tRNA synthetase            non-globular      169   232   SEG

PG0862    hypothetical protein              transmembrane     60    82    Phd
                                            transmembrane     64    80    Psort

PG0863    hypothetical protein              uncleavable       1     27    Psort
                                            signal
                                            transmembrane     5     21    Psort
                                            transmembrane     7     24    Phd

PG0864    CDP-diacylglycerol-serine-O-      may be a                      Psort
          phosphatidyltransferase           lipoprotein
                                            transmembrane     17    41    Phd
                                            transmembrane     32    48    Psort
                                            transmembrane     46    63    Phd
                                            transmembrane     72    89    Phd
                                            transmembrane     75    91    Psort
                                            transmembrane     94    111   Phd
                                            transmembrane     97    113   Psort
                                            transmembrane     126   142   Psort
                                            transmembrane     130   147   Phd
                                            transmembrane     155   178   Phd
                                            transmembrane     158   174   Psort
                                            transmembrane     197   213   Psort
                                            transmembrane     200   223   Phd
                                            transmembrane     217   233   Psort

PG0865    phosphatidylserine decarboxylase  uncleavable       1     37    Psort
                                            signal
                                            non-globular      1     50    SEG
                                            transmembrane     10    26    Psort
                                            transmembrane     33    49    Psort

PG0866    mrr restriction system related    non-globular      144   231   SEG
          protein

PG0868    ISPg4 transposase                 uncleavable       1     51    Psort
                                            signal
                                            transmembrane     321   337   Psort

PG0870    hypothetical protein              transmembrane     132   148   Psort

PG0871    conserved hypothetical            cleavable signal  1     19    Psort
          protein/immunoreactive 87kD
          antigen PG92
                                            gram negative     1     22    SignalP
                                            signal

PG0873    phosphoribosylaminoimidazole-     transmembrane     33    49    Psort
          succinocarboxamide synthase

PG0875    shikimate 5-dehydrogenase         transmembrane     124   140   Psort

PG0878    O-linked GlcNAc transferase       non-globular      517   631   SEG
                                            transmembrane     665   681   Psort
                                            transmembrane     691   707   Psort

PG0880    hypothetical protein              transmembrane     96    113   Phd
                                            transmembrane     97    113   Psort
                                            non-globular      127   186   SEG

PG0881    hypothetical protein              cleavable signal  1     44    Psort
                                            transmembrane     16    37    Phd
                                            transmembrane     42    66    Phd
                                            transmembrane     100   116   Psort
                                            transmembrane     104   122   Phd
                                            transmembrane     186   203   Phd
                                            transmembrane     223   239   Psort
                                            transmembrane     224   241   Phd

PG0882    hypothetical protein              cleavable signal  1     22    Psort
                                            gram negative     1     22    SignalP
                                            signal
                                            coil-coil         176   240   Coils

PG0885    hypothetical protein              transmembrane     27    44    Phd

PG0888    threonyl-tRNA synthetase          coil-coil         225   253   Coils
                                            transmembrane     401   417   Psort

PG0889    ISPg2 fragment (PGIS2-related     transmembrane     24    40    Psort
          fragment)

PG0892    hypothetical protein              cleavable signal  1     20    Psort
                                            transmembrane     68    85    Phd
                                            transmembrane     70    86    Psort
                                            transmembrane     90    114   Phd
                                            transmembrane     116   132   Psort
                                            transmembrane     119   136   Phd
                                            transmembrane     147   166   Phd
                                            transmembrane     150   166   Psort

PG0895    hypothetical protein              transmembrane     97    113   Psort

PG0897    probable acylamino-acid-          cleavable signal  1     20    Psort
          releasing enzyme (dipeptidyl
          aminopeptidase)
                                            gram negative     1     20    SignalP
                                            signal

PG0898    hypothetical protein              may be a                      Psort
                                            lipoprotein
                                            gram negative     1     21    SignalP
                                            signal
                                            non-globular      110   246   SEG

PG0899    conserved hypothetical protein;   transmembrane     62    79    Phd
          possible TonB-dependent receptor
                                            transmembrane     64    80    Psort
                                            non-globular      284   379   SEG

PG0901    hypothetical protein/possible     transmembrane     34    51    Phd
          ABC element with MSD domain
                                            transmembrane     35    51    Psort
                                            transmembrane     70    87    Phd
                                            transmembrane     70    86    Psort
                                            transmembrane     104   128   Phd
                                            transmembrane     110   126   Psort
                                            transmembrane     133   150   Phd
                                            transmembrane     170   187   Phd
                                            transmembrane     174   190   Psort
                                            transmembrane     192   211   Phd
                                            transmembrane     198   214   Psort
                                            transmembrane     227   244   Phd
                                            transmembrane     228   244   Psort

PG0902    hypothetical protein/possible     transmembrane     35    52    Phd
          ABC element with MSD domain
                                            transmembrane     37    53    Psort
                                            transmembrane     64    82    Phd
                                            transmembrane     103   127   Phd
                                            transmembrane     120   136   Psort
                                            transmembrane     132   154   Phd
                                            transmembrane     174   194   Phd
                                            transmembrane     177   193   Psort
                                            transmembrane     207   229   Phd
                                            transmembrane     214   230   Psort
                                            transmembrane     257   274   Phd
                                            transmembrane     260   276   Psort

PG0903    ABC transporter ATP binding       non-globular      1     81    SEG
          protein
                                            transmembrane     136   152   Psort

PG0907    pyruvate phosphate dikinase       coil-coil         164   198   Coils

PG0908    hypothetical protein              transmembrane     82    98    Psort

PG0909    hypothetical protein              gram negative     1     23    SignalP
                                            signal
                                            cleavable signal  1     23    Psort

PG0910    conserved hypothetical protein;   cleavable signal  1     29    Psort
          possible outer membrane receptor
          protein
                                            non-globular      131   270   SEG

PG0911    conserved hypothetical protein    non-globular      1     89    SEG
                                            non-globular      221   292   SEG

PG0913    possible para-aminobenzoate       non-globular      230   277   SEG
          synthase component I

PG0916    probable outer membrane           gram negative     1     23    SignalP
          lipoprotein P61                   signal
                                            coil-coil         67    95    Coils
                                            coil-coil         113   147   Coils
                                            non-globular      302   384   SEG

PG0917    hypothetical protein              gram negative     1     24    SignalP
                                            signal
                                            cleavable signal  1     22    Psort

PG0918    ISPg1 transposase (IS1106-        transmembrane     58    74    Psort
          related transposase)
                                            non-globular      138   235   SEG
                                            coil-coil         284   313   Coils

PG0919    ISPg3 (IS195) transposase         coil-coil         220   255   Coils

PG0920    conserved hypothetical            transmembrane     45    65    Phd
          protein/possible ABC element
          with MSD domain
                                            transmembrane     45    61    Psort
                                            transmembrane     84    100   Psort
                                            transmembrane     86    103   Phd
                                            transmembrane     133   157   Phd
                                            transmembrane     138   154   Psort
                                            transmembrane     187   207   Phd
                                            transmembrane     227   244   Phd
                                            transmembrane     231   247   Psort

PG0922    conserved hypothetical protein    transmembrane     46    62    Psort

PG0923    excinuclease ABC subunit A        transmembrane     638   654   Psort

PG0926    conserved hypothetical protein    transmembrane     28    44    Psort
                                            transmembrane     64    80    Psort
                                            transmembrane     94    110   Psort
                                            non-globular      154   223   SEG
                                            transmembrane     154   170   Psort
                                            transmembrane     177   193   Psort

PG0928    conserved hypothetical protein    transmembrane     1     18    Phd
                                            cleavable signal  1     18    Psort
                                            transmembrane     35    51    Psort
                                            transmembrane     38    57    Phd
                                            transmembrane     72    94    Phd
                                            transmembrane     78    94    Psort
                                            transmembrane     99    118   Phd
                                            transmembrane     103   119   Psort
                                            transmembrane     135   152   Phd
                                            transmembrane     138   154   Psort
                                            transmembrane     169   185   Psort
                                            transmembrane     171   190   Phd
                                            transmembrane     204   225   Phd
                                            transmembrane     207   223   Psort
                                            transmembrane     240   261   Phd
                                            transmembrane     246   262   Psort
                                            transmembrane     268   287   Phd
                                            transmembrane     273   289   Psort
                                            transmembrane     299   316   Phd
                                            transmembrane     301   317   Psort

PG0930    ferrous iron transport protein B  non-globular      94    225   SEG
                                            transmembrane     323   339   Psort
                                            transmembrane     324   341   Phd
                                            transmembrane     378   402   Phd
                                            transmembrane     387   403   Psort
                                            transmembrane     473   490   Phd
                                            transmembrane     477   493   Psort
                                            transmembrane     495   519   Phd
                                            transmembrane     496   512   Psort
                                            transmembrane     558   574   Psort
                                            transmembrane     563   581   Phd
                                            transmembrane     605   628   Phd
                                            transmembrane     607   623   Psort
                                            non-globular      629   685   SEG
                                            transmembrane     702   719   Phd
                                            transmembrane     703   719   Psort

PG0932    probable N-acetylmuramoyl-l-      uncleavable       1     48    Psort
          alanine amidase                   signal
                                            transmembrane     9     25    Psort
                                            non-globular      191   348   SEG
                                            transmembrane     210   226   Psort

PG0933    conserved hypothetical protein    uncleavable       1     29    Psort
                                            signal
                                            transmembrane     9     25    Psort
                                            transmembrane     11    28    Phd
                                            non-globular      107   204   SEG
                                            coil-coil         205   251   Coils

PG0934    hypothetical protein              cleavable signal  1     56    Psort
                                            transmembrane     15    32    Phd
                                            transmembrane     155   172   Phd

PG0935    hypothetical protein              uncleavable       1     47    Psort
                                            signal
                                            transmembrane     18    35    Phd
                                            transmembrane     20    36    Psort
                                            transmembrane     49    66    Phd
                                            transmembrane     51    67    Psort
                                            transmembrane     77    101   Phd
                                            transmembrane     83    99    Psort
                                            transmembrane     100   116   Psort
                                            transmembrane     121   137   Psort
                                            transmembrane     123   140   Phd
                                            transmembrane     182   202   Phd
                                            transmembrane     188   204   Psort
                                            transmembrane     220   237   Phd
                                            transmembrane     242   259   Phd
                                            transmembrane     244   260   Psort
                                            transmembrane     267   284   Phd
                                            transmembrane     272   288   Psort
                                            transmembrane     289   310   Phd
                                            transmembrane     292   308   Psort
                                            transmembrane     319   335   Psort
                                            transmembrane     320   337   Phd
                                            transmembrane     400   416   Psort
                                            transmembrane     401   418   Phd
                                            transmembrane     431   455   Phd
                                            transmembrane     431   447   Psort

PG0936    conserved hypothetical protein    coil-coil         75    118   Coils

PG0937    conserved hypothetical protein    transmembrane     76    92    Psort
                                            transmembrane     82    100   Phd
                                            transmembrane     130   147   Phd

PG0938    thiol protease                    non-globular      1     56    SEG
                                            non-globular      124   199   SEG
                                            transmembrane     227   244   Phd
                                            transmembrane     230   246   Psort
                                            transmembrane     400   417   Phd

PG0941    peptidoglycan-associated          may be a                      Psort
          lipoprotein                       lipoprotein

PG0941.1  hypothetical protein              uncleavable       1     59    Psort
                                            signal

PG0942    probable tail-specific protease   may be a                      Psort
                                            lipoprotein
                                            gram negative     1     24    SignalP
                                            signal
                                            coil-coil         453   519   Coils

PG0947    probable dihydroorotate           transmembrane     219   236   Phd
          dehydrogenase catalytic subunit
                                            transmembrane     241   263   Phd

PG0948    acetoacetate:butyrate/acetate     non-globular      89    162   SEG
          coenzyme A transferase

PG0950    conserved hypothetical protein    uncleavable       1     42    Psort
                                            signal

PG0951    hypothetical protein              non-globular      58    158   SEG

PG0953    conserved hypothetical protein    transmembrane     182   200   Phd

PG0954    DNA mismatch repair protein,      transmembrane     90    106   Psort
          MUTS family
                                            coil-coil         149   193   Coils
                                            transmembrane     200   216   Psort

PG0961    3-hydroxybutryl-CoA dehydratase   non-globular      1     141   SEG
          (crotonase)

PG0962    3-hydroxybutyryl-CoA              uncleavable       1     57    Psort
          dehydrogenase (beta-              signal
          hydroxybutyryl-CoA
          dehydrogenase) (BHBD)
                                            transmembrane     3     19    Psort
                                            non-globular      50    127   SEG
                                            transmembrane     228   244   Psort

PG0965    conserved hypothetical protein    gram negative     1     67    SignalP
                                            signal
                                            uncleavable       1     22    Psort
                                            signal
                                            transmembrane     6     22    Psort
                                            transmembrane     47    64    Phd
                                            transmembrane     47    63    Psort

PG0966    conserved hypothetical protein    uncleavable       1     47    Psort
          (probable cytochrome c            signal
          biogenesis protein,
          thiol:disulfide interchange
          protein)
                                            transmembrane     6     22    Psort
                                            coil-coil         105   151   Coils

PG0967    hypothetical protein              coil-coil         34    82    Coils

PG0970    probable inner membrane signal-   non-globular      44    120   SEG
          transducing protein
                                            non-globular      203   245   SEG

PG0972    hypothetical protein              uncleavable       1     16    Psort
                                            signal
                                            coil-coil         14    45    Coils

PG0973    phosphomannomutase or             transmembrane     164   181   Phd
          phosphoglucomutase
                                            transmembrane     188   205   Phd
                                            transmembrane     189   205   Psort

PG0975    conserved hypothetical protein    uncleavable       1     28    Psort
                                            signal

PG0976    alanine racemase; N-              transmembrane     374   390   Psort
          acetylymuramoylalanyl-D-
          glutamate-2,6,-diaminopimelate-
          D-alanine-D-alanine ligase
                                            non-globular      592   658   SEG

PG0977    hypothetical protein              transmembrane     188   204   Psort

PG0978    probable glucokinase regulatory   coil-coil         12    40    Coils
          protein-related protein

PG0980    sodium permease-related protein   cleavable signal  1     48    Psort
                                            transmembrane     46    66    Phd
                                            transmembrane     76    92    Psort
                                            transmembrane     80    98    Phd
                                            transmembrane     121   145   Phd
                                            transmembrane     131   147   Psort
                                            transmembrane     150   169   Phd
                                            transmembrane     154   170   Psort
                                            transmembrane     182   199   Phd
                                            transmembrane     185   201   Psort
                                            transmembrane     233   250   Phd
                                            transmembrane     277   294   Phd
                                            transmembrane     277   293   Psort
                                            transmembrane     321   340   Phd
                                            transmembrane     324   340   Psort
                                            transmembrane     377   393   Psort
                                            transmembrane     379   399   Phd
                                            transmembrane     404   422   Phd
                                            transmembrane     431   448   Phd
                                            transmembrane     432   448   Psort
                                            transmembrane     461   478   Phd
                                            transmembrane     463   479   Psort

PG0981    conserved hypothetical protein    transmembrane     60    77    Phd
                                            transmembrane     62    78    Psort
                                            non-globular      503   593   SEG

PG0982    ATPase                            non-globular      154   229   SEG

PG0983    probable methylase                non-globular      130   255   SEG

PG0984    RNA polymerase sigma-54 factor    non-globular      1     104   SEG
          (major sigma factor)

PG0986    hypothetical protein              non-globular      1     60    SEG
                                            transmembrane     21    37    Psort

PG0988    mobilization protein              coil-coil         217   268   Coils
                                            coil-coil         284   325   Coils
                                            non-globular      353   455   SEG

PG0989    hypothetical protein              may be a                      Psort
                                            lipoprotein

PG0991    conserved hypothetical protein    uncleavable       1     33    Psort
                                            signal
                                            transmembrane     4     20    Psort

PG0994    transposase                       coil-coil         92    123   Coils
                                            non-globular      218   273   SEG
                                            transmembrane     244   260   Psort

PG0999    conserved hypothetical protein    transmembrane     52    68    Psort
                                            transmembrane     91    107   Psort
                                            transmembrane     134   150   Psort
                                            non-globular      201   254   SEG
                                            transmembrane     233   249   Psort
                                            transmembrane     308   324   Psort
                                            transmembrane     357   373   Psort
                                            transmembrane     387   403   Psort
                                            transmembrane     433   449   Psort
                                            transmembrane     458   474   Psort

PG1000    heat shock protein ClpB           coil-coil         120   169   Coils
                                            coil-coil         389   487   Coils

PG1001    hypothetical protein              gram negative     1     22    SignalP
                                            signal
                                            cleavable signal  1     22    Psort

PG1004    adenylosuccinate lyase            transmembrane     255   271   Psort

PG1006    hypothetical protein              non-globular      1     71    SEG

PG1007    uracil permease                   cleavable signal  1     43    Psort
                                            transmembrane     17    34    Phd
                                            transmembrane     58    74    Psort
                                            transmembrane     59    77    Phd
                                            transmembrane     84    102   Phd
                                            transmembrane     87    103   Psort
                                            transmembrane     116   134   Phd
                                            transmembrane     118   134   Psort
                                            transmembrane     144   168   Phd
                                            transmembrane     144   160   Psort
                                            transmembrane     166   182   Psort
                                            transmembrane     173   190   Phd
                                            transmembrane     208   224   Psort
                                            transmembrane     209   228   Phd
                                            transmembrane     288   307   Phd
                                            transmembrane     288   304   Psort
                                            transmembrane     316   333   Phd
                                            transmembrane     316   332   Psort
                                            transmembrane     350   366   Psort
                                            transmembrane     355   379   Phd
                                            transmembrane     374   390   Psort

PG1009    exodeoxyribonuclease VII large    transmembrane     213   229   Psort
          subunit

PG1011    hypothetical protein              coil-coil         113   151   Coils
                                            non-globular      153   198   SEG
                                            coil-coil         199   226   Coils
                                            coil-coil         240   272   Coils
                                            coil-coil         383   505   Coils

PG1012    hypothetical protein              transmembrane     36    53    Phd

PG1013    valyl-tRNA synthetase (valine--   coil-coil         841   876   Coils
          tRNA ligase)

PG1014    hypothetical protein              coil-coil         119   150   Coils

PG1016    NADPH thioredoxin reductase       non-globular      56    169   SEG

PG1017    glycosyltransferase               non-globular      1     66    SEG
                                            transmembrane     26    42    Psort

PG1019    PorS protein                      transmembrane     27    45    Phd
                                            transmembrane     27    43    Psort
                                            transmembrane     52    69    Phd
                                            transmembrane     54    70    Psort
                                            transmembrane     91    110   Phd
                                            transmembrane     97    113   Psort
                                            transmembrane     126   142   Psort
                                            transmembrane     128   145   Phd
                                            transmembrane     175   196   Phd
                                            transmembrane     183   199   Psort
                                            transmembrane     234   251   Phd
                                            transmembrane     235   251   Psort
                                            transmembrane     256   273   Phd
                                            transmembrane     303   327   Phd
                                            transmembrane     304   320   Psort
                                            transmembrane     335   351   Psort
                                            transmembrane     337   356   Phd
                                            transmembrane     375   392   Phd
                                            transmembrane     377   393   Psort
                                            transmembrane     407   424   Phd

PG1021    hypothetical protein              uncleavable       1     24    Psort
                                            signal
                                            transmembrane     7     23    Psort
                                            coil-coil         132   173   Coils

PG1022    probable rhamnosyltransferase     uncleavable       1     31    Psort
                                            signal
                                            non-globular      1     53    SEG

PG1024    hypothetical protein              uncleavable       1     41    Psort
                                            signal

PG1025    conserved hypothetical protein    transmembrane     44    60    Psort
                                            transmembrane     116   132   Psort
                                            transmembrane     144   160   Psort
                                            transmembrane     191   207   Psort
                                            transmembrane     222   238   Psort
                                            transmembrane     240   256   Psort
                                            transmembrane     271   287   Psort

PG1026    UDP-glucose dehydrogenase         transmembrane     81    97    Psort

PG1027    peptide chain release factor RF-  non-globular      1     79    SEG
          2
                                            coil-coil         238   266   Coils

PG1029    transferase protein               cleavable signal  1     43    Psort
                                            transmembrane     103   119   Psort

PG1031    conserved hypothetical protein    transmembrane     239   255   Psort
          (probable alcohol dehydrogenase)
                                            non-globular      305   382   SEG

PG1031.1  hypothetical protein              transmembrane     88    104   Psort

PG1031.3  hypothetical protein              uncleavable       1     30    Psort
                                            signal

PG1033    hypothetical protein              transmembrane     23    40    Phd
                                            transmembrane     61    77    Psort
                                            transmembrane     62    79    Phd
                                            transmembrane     111   130   Phd
                                            transmembrane     152   169   Phd
                                            transmembrane     178   195   Phd
                                            transmembrane     180   196   Psort

PG1036    cobalamin biosynthesis protein    uncleavable       1     20    Psort
                                            signal
                                            non-globular      1     177   SEG
                                            transmembrane     5     21    Psort
                                            transmembrane     70    86    Psort
                                            transmembrane     97    113   Psort
                                            transmembrane     233   249   Psort
                                            transmembrane     316   332   Psort

PG1038    cobyric acid synthase             transmembrane     108   124   Psort

PG1040    cobyrinic acid a,c-diamide        transmembrane     118   135   Phd
          synthase

PG1041    hypothetical protein              transmembrane     191   207   Psort
                                            non-globular      245   313   SEG
                                            coil-coil         518   549   Coils

PG1042    hypothetical protein              uncleavable       1     49    Psort
                                            signal
                                            transmembrane     10    26    Psort
                                            transmembrane     13    30    Phd
                                            transmembrane     44    62    Phd
                                            transmembrane     45    61    Psort
                                            transmembrane     156   175   Phd
                                            transmembrane     164   180   Psort
                                            transmembrane     195   211   Psort
                                            transmembrane     198   215   Phd

PG1043    phosphoserine phosphatase         cleavable signal  1     28    Psort

PG1048    ABC transporter, ATP-binding      transmembrane     28    44    Psort
          protein
                                            transmembrane     60    76    Psort
                                            transmembrane     138   154   Psort
                                            transmembrane     159   175   Psort
                                            coil-coil         199   232   Coils
                                            transmembrane     249   265   Psort
                                            transmembrane     270   286   Psort

PG1049    ABC transporter protein (NBD and  uncleavable       1     59    Psort
          MSD domains)                      signal
                                            non-globular      1     82    SEG
                                            transmembrane     17    33    Psort
                                            transmembrane     48    64    Psort
                                            transmembrane     130   146   Psort
                                            transmembrane     153   169   Psort
                                            transmembrane     243   259   Psort
                                            transmembrane     266   282   Psort

PG1050    ISPg1 transposase (IS1106-        transmembrane     58    74    Psort
          related) transposase
                                            non-globular      138   235   SEG
                                            coil-coil         284   313   Coils

PG1051    hypothetical protein              cleavable signal  1     29    Psort

PG1052    conserved hypothetical protein    gram negative     1     23    SignalP
                                            signal
                                            cleavable signal  1     20    Psort
                                            non-globular      67    116   SEG

PG1053    conserved hypothetical protein    transmembrane     22    39    Phd
          (probable membrane transport
          protein)
                                            transmembrane     23    39    Psort
                                            transmembrane     236   252   Psort
                                            transmembrane     238   255   Phd
                                            transmembrane     258   274   Psort
                                            transmembrane     260   277   Phd
                                            transmembrane     286   302   Psort
                                            transmembrane     288   305   Phd
                                            transmembrane     340   356   Psort
                                            transmembrane     341   365   Phd
                                            transmembrane     361   377   Psort
                                            transmembrane     370   387   Phd
                                            transmembrane     421   438   Phd
                                            transmembrane     422   438   Psort
                                            transmembrane     626   642   Psort
                                            transmembrane     627   644   Phd
                                            transmembrane     646   662   Psort
                                            transmembrane     649   666   Phd
                                            transmembrane     672   688   Psort
                                            transmembrane     720   737   Phd
                                            transmembrane     723   739   Psort
                                            transmembrane     749   768   Phd
                                            transmembrane     750   766   Psort

PG1055    probable alginate O-acetylation   transmembrane     27    44    Phd
          protein
                                            transmembrane     29    45    Psort
                                            transmembrane     57    80    Phd
                                            transmembrane     69    85    Psort
                                            transmembrane     100   116   Psort
                                            transmembrane     104   121   Phd
                                            transmembrane     153   170   Phd
                                            transmembrane     279   296   Phd
                                            transmembrane     284   300   Psort
                                            transmembrane     358   375   Phd
                                            transmembrane     360   376   Psort
                                            transmembrane     401   417   Psort
                                            transmembrane     404   421   Phd
                                            transmembrane     443   460   Phd
                                            transmembrane     445   461   Psort
                                            transmembrane     480   496   Psort
                                            transmembrane     482   499   Phd

PG1056    conserved hypothetical protein    gram negative     1     34    SignalP
                                            signal
                                            cleavable signal  1     30    Psort

PG1057    conserved hypothetical protein;   transmembrane     31    48    Phd
          possible periplasmic protein
                                            transmembrane     31    47    Psort
                                            transmembrane     403   420   Phd

PG1058    ISPg2 fragment (PGIS2-related     transmembrane     29    45    Psort
          fragment)

PG1059    conserved hypothetical protein    non-globular      1     116   SEG
                                            coil-coil         123   165   Coils
                                            coil-coil         357   418   Coils
                                            coil-coil         511   626   Coils

PG1060    dehydrogenase                     transmembrane     143   159   Psort

PG1061    8-amino-7-oxononanoate synthase   non-globular      1     103   SEG

PG1061.2  hypothetical protein              transmembrane     22    38    Psort

PG1062    ISPg1 transposase (IS1106-        transmembrane     58    74    Psort
          related) transposase
                                            non-globular      138   235   SEG
                                            coil-coil         284   313   Coils

PG1063    hypothetical protein              uncleavable       1     45    Psort
                                            signal
                                            transmembrane     22    38    Psort
                                            transmembrane     24    48    Phd

PG1064    hypothetical protein              gram negative     1     23    SignalP
                                            signal
                                            uncleavable       1     24    Psort
                                            signal
                                            transmembrane     4     20    Psort
                                            transmembrane     7     24    Phd
                                            coil-coil         66    93    Coils

PG1066    hypothetical protein              coil-coil         324   368   Coils
                                            non-globular      397   481   SEG
                                            non-globular      681   746   SEG
                                            transmembrane     1052  1068  Psort
                                            non-globular      1067  1140  SEG

PG1067    hypothetical protein              transmembrane     43    59    Psort

PG1069    DnaK protein (Hsp70)              non-globular      171   246   SEG
                                            coil-coil         501   595   Coils

PG1072    conserved hypothetical protein    transmembrane     110   129   Phd
          (possible carbonic anhydrase)
                                            transmembrane     122   138   Psort

PG1073    hypothetical protein              coil-coil         99    131   Coils
                                            coil-coil         164   207   Coils

PG1075    hypothetical protein              non-globular      164   232   SEG

PG1076    conserved hypothetical protein,   gram negative     1     23    SignalP
          with TPR repeats                  signal
                                            cleavable signal  1     20    Psort

PG1077    hypothetical protein              coil-coil         39    76    Coils

PG1078    conserved hypothetical protein    cleavable signal  1     50    Psort
                                            transmembrane     9     26    Phd
                                            transmembrane     35    52    Phd
                                            transmembrane     57    76    Phd
                                            transmembrane     58    74    Psort
                                            transmembrane     84    102   Phd
                                            transmembrane     85    101   Psort
                                            transmembrane     117   134   Phd
                                            transmembrane     119   135   Psort

PG1080    hypothetical protein              transmembrane     80    96    Psort

PG1081    erythronate-4-phosphate           non-globular      280   338   SEG
          dehydrogenase

PG1082    probable oxidoreductase (short-   uncleavable       1     34    Psort
          chain dehydrogenase)              signal

PG1082.1  hypothetical protein              transmembrane     67    83    Psort

PG1083    conserved hypothetical protein    gram negative     1     33    SignalP
                                            signal
                                            cleavable signal  1     30    Psort
                                            non-globular      1     118   SEG

PG1084    ABC transporter ATP-binding       non-globular      198   287   SEG
          protein
                                            coil-coil         555   609   Coils

PG1085    probable peptidyl-prolyl cis-     may be a                      Psort
          trans isomerase                   lipoprotein
                                            gram negative     1     32    SignalP
                                            signal

PG1086    hypothetical protein              uncleavable       1     58    Psort
                                            signal
                                            transmembrane     7     23    Psort

PG1087    ISPg1 transposase fragment        non-globular      36    133   SEG
          (IS1106-related transposase)
                                            coil-coil         182   211   Coils

PG1088    hypothetical protein              uncleavable       1     18    Psort
                                            signal

PG1089    hypothetical protein              gram negative     1     27    SignalP
                                            signal
                                            cleavable signal  1     27    Psort
                                            coil-coil         108   138   Coils

PG1091.1  hypothetical protein              transmembrane     68    84    Psort

PG1093    probable response regulator       non-globular      98    199   SEG

PG1095    3-oxyacyl [acyl-carrier protein]  non-globular      110   196   SEG
          reductase

PG1098    replicative DNA helicase          coil-coil         134   168   Coils
                                            non-globular      446   528   SEG

PG1099    ISPg1 transposase (IS1106-        transmembrane     58    74    Psort
          related transposase)
                                            non-globular      168   218   SEG

PG1101    alanyl-tRNA synthetase (alanine-  coil-coil         357   392   Coils
          tRNA ligase) (ALARS)
                                            coil-coil         710   751   Coils

PG1102    3-dehydroquinate synthase         transmembrane     254   271   Phd
                                            transmembrane     255   271   Psort

PG1104    1-acyl-sn-glycerol-3-phosphate    cleavable signal  1     33    Psort
          acyltransferase

PG1105    hypothetical protein              transmembrane     136   152   Psort

PG1105.2  hypothetical protein              uncleavable       1     25    Psort
                                            signal
                                            transmembrane     9     25    Psort

PG1106    conserved hypothetical protein    transmembrane     30    46    Psort
                                            non-globular      166   335   SEG
                                            transmembrane     283   299   Psort
                                            transmembrane     330   346   Psort
                                            transmembrane     378   394   Psort

PG1110    probable cytoplasmic axial        coil-coil         182   226   Coils
          filament protein/ribonuclease G

PG1112    anaerobic ribonucleotide          transmembrane     233   249   Psort
          reductase activating protein
          (anaerobic ribonucleoside-
          triphosphate reductase
          activating protein) (class III
          anaerobic ribonucleotide
          reductase small component)

PG1114    ISPg4 transposase                 uncleavable       1     51    Psort
                                            signal
                                            transmembrane     282   299   Phd
                                            transmembrane     321   337   Psort
                                            transmembrane     324   341   Phd

PG1115    ISPg3 (IS195) transposase         coil-coil         220   255   Coils

PG1119    hypothetical protein              non-globular      1     129   SEG
                                            cleavable signal  1     47    Psort

PG1121    conserved hypothetical protein    transmembrane     194   210   Psort

PG1122    ornithine aminotransferase        transmembrane     256   272   Psort
          (glutamate-1-semialdehyde 2,1-
          aminomutase)
                                            transmembrane     293   309   Psort

PG1125    UDP-glucose 6-dehydrogenase       uncleavable       1     30    Psort
                                            signal
                                            transmembrane     6     22    Psort
                                            coil-coil         195   222   Coils

PG1126    phosphoserine aminotransferase    may be a                      Psort
          (PSAT) (vegetative protein 234)   lipoprotein

PG1127    D-3-phosphoglycerate              coil-coil         17    53    Coils
          dehydrogenase

PG1128    conserved hypothetical protein    non-globular      319   369   SEG

PG1129    conserved hypothetical protein;   non-globular      75    112   SEG
          possible DNA mismatch repair
          protein

PG1131    conserved hypothetical protein    gram negative     1     21    SignalP
                                            signal
                                            cleavable signal  1     21    Psort

PG1137    hypothetical protein              non-globular      200   269   SEG

PG1138    ferrous iron transport protein B  non-globular      58    136   SEG
                                            transmembrane     419   436   Phd
                                            transmembrane     423   439   Psort
                                            transmembrane     477   495   Phd
                                            transmembrane     481   497   Psort
                                            transmembrane     525   541   Psort
                                            transmembrane     561   578   Phd
                                            transmembrane     583   600   Phd
                                            transmembrane     584   600   Psort
                                            transmembrane     646   662   Psort
                                            transmembrane     647   664   Phd
                                            coil-coil         669   707   Coils
                                            transmembrane     786   802   Psort
                                            transmembrane     787   804   Phd
                                            transmembrane     821   839   Phd
                                            transmembrane     828   844   Psort

PG1139    hypothetical protein              cleavable signal  1     53    Psort
                                            non-globular      1     81    SEG

PG1140    30S ribosomal protein S1          non-globular      170   242   SEG
                                            coil-coil         541   573   Coils

PG1143    conserved hypothetical protein    transmembrane     28    46    Phd
                                            transmembrane     29    45    Psort

PG1144    exodeoxyribonuclease V            non-globular      184   284   SEG

PG1145    hypothetical protein              gram negative     1     26    SignalP
                                            signal
                                            cleavable signal  1     24    Psort

PG1145.1  hypothetical protein              uncleavable       1     21    Psort
                                            signal
                                            transmembrane     38    54    Psort

PG1146    probable glycine dehydrogenase    cleavable signal  1     24    Psort
          [decarboxylating], mitochondrial
          precursor (glycine
          decarboxylase) (glycine cleavage
          system p-protein)

PG1148    glucose inhibited division        transmembrane     91    107   Psort
          protein B (glucose-inhibited
          division protein B)

PG1149    conserved hypothetical protein    gram negative     1     38    SignalP
                                            signal
                                            transmembrane     17    33    Psort

PG1152    conserved hypothetical protein    gram negative     1     26    SignalP
          (possible encapsulation-related   signal
          protein)
                                            cleavable signal  1     40    Psort

PG1153    dipeptidase                       gram negative     1     24    SignalP
                                            signal
                                            cleavable signal  1     24    Psort

PG1155    FKBP-type peptidyl-prolyl cis-    non-globular      162   190   SEG
          trans isomerase

PG1156    conserved hypothetical protein    gram negative     1     41    SignalP
                                            signal
                                            transmembrane     24    40    Psort
                                            coil-coil         101   140   Coils

PG1157    hypothetical protein              transmembrane     60    77    Phd
                                            transmembrane     61    77    Psort

PG1159    ISPg1 fragment (IS1126-related    transmembrane     57    73    Psort
          transposase fragment)

PG1160    formate--tetrahydrofolate ligase  non-globular      37    117   SEG
          (formyltetrahydrofolate
          synthetase)
                                            transmembrane     513   529   Psort

PG1166    acyl-CoA synthetase               uncleavable       1     13    Psort
                                            signal
                                            non-globular      520   599   SEG

PG1167    large conductance                 cleavable signal  1     31    Psort
          mechanosensitive channel protein
                                            non-globular      89    139   SEG
                                            transmembrane     91    107   Psort

PG1168    NAD(P)+ transhydrogenase subunit  non-globular      1     76    SEG
          alpha 1 (pyridine nucleotide
          transhydrogenase subunit alpha
          1) (nicotinamide nucleotide
          transhydrogenase subunit alpha
          1)
                                            cleavable signal  1     31    Psort
                                            transmembrane     163   187   Phd
                                            non-globular      188   259   SEG
                                            transmembrane     236   252   Psort
                                            transmembrane     262   279   Phd
                                            transmembrane     320   336   Psort

PG1169    probable NAD(P) transhydrogenase  cleavable signal  1     31    Psort
          subunit alpha 2(pyridine
          nucleotide transhydrogenase
          subunit alpha 2) (nicotinamide
          nucleotide transhydrogenase
          subunit alpha 2)
                                            transmembrane     3     20    Phd
                                            transmembrane     36    53    Phd
                                            transmembrane     67    85    Phd
                                            transmembrane     69    85    Psort
                                            transmembrane     104   120   Psort
                                            transmembrane     128   144   Psort

PG1170    NAD(P) transhydrogenase subunit   cleavable signal  1     31    Psort
          beta (pyridine nucleotide
          transhydrogenase subunit beta)
          (nicotinamide nucleotide
          transhydrogenase subunit beta)
                                            transmembrane     6     23    Phd
                                            transmembrane     30    47    Phd
                                            transmembrane     52    70    Phd
                                            transmembrane     59    75    Psort
                                            transmembrane     86    102   Psort
                                            transmembrane     92    109   Phd
                                            transmembrane     105   121   Psort
                                            transmembrane     129   146   Phd
                                            transmembrane     146   162   Psort
                                            transmembrane     168   185   Phd
                                            transmembrane     181   197   Psort
                                            transmembrane     190   208   Phd
                                            transmembrane     221   237   Psort
                                            transmembrane     234   255   Phd
                                            transmembrane     246   262   Psort
                                            transmembrane     271   287   Psort
                                            non-globular      274   348   SEG
                                            transmembrane     294   310   Psort
                                            non-globular      441   531   SEG

PG1171    hypothetical protein              cleavable signal  1     27    Psort

PG1172    conserved hypothetical protein    cleavable signal  1     39    Psort
          (possible secreted protein)
          (possible protease) (stomatin-
          like protein)
                                            transmembrane     5     22    Phd
                                            coil-coil         193   224   Coils
                                            coil-coil         235   268   Coils

PG1173    conserved hypothetical protein    cleavable signal  1     40    Psort
                                            transmembrane     13    37    Phd
                                            transmembrane     42    66    Phd
                                            transmembrane     56    72    Psort
                                            transmembrane     134   150   Psort

PG1176    L-lactate permease                cleavable signal  1     47    Psort
                                            transmembrane     5     22    Phd
                                            transmembrane     29    46    Phd
                                            transmembrane     65    81    Psort
                                            transmembrane     66    83    Phd
                                            transmembrane     111   127   Psort
                                            transmembrane     128   144   Psort
                                            transmembrane     130   154   Phd
                                            transmembrane     150   166   Psort
                                            transmembrane     192   210   Phd
                                            transmembrane     195   211   Psort
                                            transmembrane     225   242   Phd
                                            transmembrane     225   241   Psort
                                            transmembrane     251   267   Psort
                                            transmembrane     252   269   Phd
                                            transmembrane     289   305   Psort
                                            transmembrane     292   309   Phd
                                            transmembrane     344   361   Phd
                                            transmembrane     345   361   Psort
                                            transmembrane     385   402   Phd
                                            transmembrane     387   403   Psort
                                            transmembrane     407   425   Phd
                                            non-globular      426   496   SEG
                                            transmembrane     497   514   Phd
                                            transmembrane     500   516   Psort
                                            non-globular      515   516   SEG

PG1177    probable outer membrane           gram negative     1     50    SignalP
          lipoprotein P15                   signal
                                            transmembrane     32    48    Psort

PG1179    lipoate-protein ligase B; phnP-   transmembrane     381   397   Psort
          like protein

PG1180    conserved hypothetical protein    transmembrane     298   314   Psort

PG1183    conserved hypothetical protein    cleavable signal  1     52    Psort

PG1184    ISPG1 transposase fragment        non-globular      36    133   SEG
          (IS1106-related transposase)
                                            coil-coil         182   211   Coils

PG1185    ISPg2 (PGIS2) transposase         transmembrane     22    38    Psort
                                            coil-coil         43    70    Coils
                                            non-globular      331   376   SEG

PG1186    hypothetical protein              uncleavable       1     27    Psort
                                            signal
                                            transmembrane     11    27    Psort

PG1188    orotate                           transmembrane     74    91    Phd
          phosphoribosyltransferase
                                            transmembrane     78    94    Psort

PG1190    conserved hypothetical protein    cleavable signal  1     14    Psort
          (probable 1-acylglycerol-3-
          phosphate O-acyltransferase)

PG1191    conserved hypothetical protein    transmembrane     42    60    Phd
                                            transmembrane     42    58    Psort
                                            coil-coil         134   162   Coils

PG1192    hypothetical protein              transmembrane     42    66    Phd
                                            transmembrane     52    68    Psort

PG1194    hypothetical protein              cleavable signal  1     26    Psort
                                            transmembrane     11    28    Phd
                                            transmembrane     46    70    Phd
                                            transmembrane     53    69    Psort
                                            transmembrane     78    95    Phd
                                            transmembrane     101   119   Phd
                                            transmembrane     105   121   Psort
                                            transmembrane     135   159   Phd
                                            transmembrane     141   157   Psort
                                            transmembrane     170   189   Phd
                                            transmembrane     174   190   Psort
                                            transmembrane     222   240   Phd
                                            transmembrane     222   238   Psort
                                            transmembrane     252   274   Phd
                                            transmembrane     253   269   Psort
                                            transmembrane     279   296   Phd
                                            transmembrane     301   319   Phd
                                            transmembrane     303   319   Psort

PG1195    phosphoribosylamine--glycine      cleavable signal  1     26    Psort
          ligase (GARS) (glycinamide
          ribonucleotide synthetase)
          (phosphoribosylglycinamide
          synthetase)

PG1196    prolyl tripeptidyl peptidase      gram negative     1     24    SignalP
          (Ptp-A)                           signal
                                            cleavable signal  1     31    Psort
                                            transmembrane     120   136   Psort

PG1197    conserved hypothetical protein    transmembrane     207   224   Phd
          (possible oxidoreductase)
                                            transmembrane     207   223   Psort
                                            non-globular      352   484   SEG

PG1198    hypothetical protein              gram negative     1     25    SignalP
                                            signal
                                            uncleavable       1     33    Psort
                                            signal
                                            transmembrane     10    26    Psort
                                            transmembrane     14    31    Phd

PG1199    1-deoxy-d-xylulose-5-phosphate    uncleavable       1     43    Psort
          reductoisomerase (DXP             signal
          reductoisomerase) (1-
          deoxyxylulose 5-phosphate
          reductoisomerase)
                                            transmembrane     10    26    Psort

PG1200    hypothetical protein              non-globular      1     81    SEG

PG1201    UDP-N-acetylglucosamine-1-        transmembrane     173   190   Phd
          carboxyvinyltransferase
          (enoylpyruvate transferase)
          (UDP-N-acetylglucosamine
          enolpyruvyl transferase) (EPT)
                                            transmembrane     241   258   Phd
                                            transmembrane     316   333   Phd
                                            transmembrane     373   389   Psort
                                            transmembrane     386   403   Phd
                                            transmembrane     443   459   Psort

PG1203    glucose-6-phosphate isomerase     coil-coil         161   188   Coils
                                            transmembrane     201   217   Psort

PG1206    uridine phosphorylase             transmembrane     250   266   Psort

PG1207    hypothetical protein              cleavable signal  1     24    Psort
                                            coil-coil         108   164   Coils
                                            coil-coil         395   473   Coils

PG1207.1  hypothetical protein              uncleavable       1     24    Psort
                                            signal

PG1208    immunoreactive 47 kDa antigen     gram negative     1     23    SignalP
          PG97                              signal
                                            cleavable signal  1     23    Psort
                                            non-globular      109   269   SEG

PG1210    probable thiamine biosynthesis    gram negative     1     23    SignalP
          protein/ABC related SBP           signal
                                            uncleavable       1     20    Psort
                                            signal
                                            transmembrane     4     20    Psort

PG1211    ABC transporter, ATP-binding      non-globular      110   176   SEG
          protein (nitrate ABC
          transporter, ATP-binding
          protein)

PG1212    permease protein (probable        gram negative     1     35    SignalP
          nitrate ABC transporter,          signal
          permease protein)
                                            cleavable signal  1     28    Psort
                                            transmembrane     16    36    Phd
                                            transmembrane     57    81    Phd
                                            transmembrane     63    79    Psort
                                            transmembrane     86    103   Phd
                                            transmembrane     101   117   Psort
                                            transmembrane     108   132   Phd
                                            transmembrane     119   135   Psort
                                            transmembrane     174   191   Phd
                                            transmembrane     176   192   Psort
                                            transmembrane     215   234   Phd
                                            transmembrane     220   236   Psort

PG1214    hypothetical protein/possible     cleavable signal  1     18    Psort
          ABC element with MSD domain
                                            transmembrane     74    90    Psort
                                            transmembrane     116   132   Psort
                                            transmembrane     146   162   Psort
                                            transmembrane     190   206   Psort

PG1215    ISPg1 transposase fragment        non-globular      36    133   SEG
          (IS1106-related transposase)

PG1216    conserved hypothetical protein    gram negative     1     21    SignalP
                                            signal
                                            cleavable signal  1     21    Psort

PG1217    DNA gyrase subunit A              coil-coil         346   382   Coils
          (topoisomerase)
                                            non-globular      384   430   SEG
                                            coil-coil         431   484   Coils
                                            non-globular      703   859   SEG

PG1218    conserved hypothetical protein    uncleavable       1     26    Psort
                                            signal
                                            transmembrane     8     24    Psort
                                            transmembrane     11    28    Phd
                                            coil-coil         30    69    Coils
                                            coil-coil         83    184   Coils

PG1220    hypothetical protein              uncleavable       1     59    Psort
                                            signal
                                            transmembrane     12    28    Psort
                                            transmembrane     14    31    Phd
                                            transmembrane     41    57    Psort
                                            transmembrane     42    59    Phd
                                            transmembrane     141   158   Phd

PG1222    hypothetical protein              uncleavable       1     42    Psort
                                            signal
                                            transmembrane     19    35    Psort
                                            transmembrane     22    39    Phd
                                            transmembrane     68    85    Phd
                                            transmembrane     90    112   Phd
                                            transmembrane     94    110   Psort
                                            transmembrane     124   141   Phd
                                            transmembrane     128   144   Psort
                                            transmembrane     146   164   Phd
                                            transmembrane     151   167   Psort
                                            transmembrane     178   195   Phd
                                            transmembrane     217   234   Phd
                                            transmembrane     218   234   Psort
                                            transmembrane     300   317   Phd
                                            transmembrane     301   317   Psort
                                            transmembrane     324   340   Psort
                                            transmembrane     325   342   Phd
                                            transmembrane     349   366   Phd
                                            transmembrane     381   398   Phd
                                            transmembrane     382   398   Psort

PG1223    rod shape-determining protein     cleavable signal  1     35    Psort
                                            transmembrane     19    36    Phd
                                            transmembrane     54    72    Phd
                                            transmembrane     56    72    Psort
                                            transmembrane     82    101   Phd
                                            transmembrane     83    99    Psort
                                            transmembrane     146   163   Phd
                                            transmembrane     147   163   Psort
                                            transmembrane     182   202   Phd
                                            transmembrane     188   204   Psort
                                            transmembrane     220   237   Phd
                                            transmembrane     220   236   Psort
                                            transmembrane     246   262   Psort
                                            transmembrane     250   274   Phd
                                            transmembrane     270   286   Psort
                                            transmembrane     290   311   Phd
                                            transmembrane     293   309   Psort
                                            transmembrane     396   413   Phd
                                            transmembrane     397   413   Psort
                                            transmembrane     429   447   Phd
                                            transmembrane     429   445   Psort
                                            transmembrane     452   473   Phd
                                            transmembrane     462   478   Psort

PG1224    penicillin binding protein 2      uncleavable       1     26    Psort
                                            signal
                                            transmembrane     15    31    Psort
                                            transmembrane     18    35    Phd

PG1225    conserved hypothetical protein    uncleavable       1     53    Psort
                                            signal
                                            transmembrane     5     21    Psort
                                            transmembrane     12    34    Phd
                                            transmembrane     27    43    Psort
                                            transmembrane     39    63    Phd
                                            transmembrane     47    63    Psort
                                            transmembrane     68    85    Phd
                                            transmembrane     111   131   Phd
                                            transmembrane     113   129   Psort
                                            transmembrane     141   158   Phd
                                            transmembrane     146   162   Psort

PG1226    conserved hypothetical protein    cleavable signal  1     45    Psort
          (probable rod shape-determining
          protein MreC)
                                            transmembrane     15    32    Phd
                                            coil-coil         43    87    Coils
                                            transmembrane     156   173   Phd
                                            transmembrane     254   271   Phd

PG1227    rod shape-determining protein     non-globular      97    201   SEG
          MreB

PG1230    ISPg1 transposase fragment        non-globular      36    133   SEG
          (IS1106-related transposase)
                                            coil-coil         182   211   Coils

PG1233    conserved hypothetical protein    uncleavable       1     29    Psort
                                            signal
                                            transmembrane     12    28    Psort

PG1234    conserved hypothetical protein    gram negative     1     21    SignalP
                                            signal
                                            cleavable signal  1     28    Psort
                                            non-globular      22    235   SEG
                                            transmembrane     94    110   Psort
                                            transmembrane     123   139   Psort
                                            transmembrane     156   172   Psort
                                            transmembrane     180   196   Psort

PG1235    conserved hypothetical protein    uncleavable       1     54    Psort
                                            signal
                                            transmembrane     18    35    Phd
                                            transmembrane     19    35    Psort
                                            transmembrane     73    90    Phd
                                            transmembrane     96    118   Phd
                                            transmembrane     98    114   Psort
                                            transmembrane     150   174   Phd
                                            transmembrane     150   166   Psort
                                            transmembrane     179   197   Phd
                                            transmembrane     186   202   Psort
                                            transmembrane     207   224   Phd
                                            transmembrane     211   227   Psort

PG1236    conserved hypothetical protein    cleavable signal  1     36    Psort

PG1236.1  hypothetical protein              cleavable signal  1     18    Psort

PG1238    cation transport protein (cation  transmembrane     40    56    Psort
          efflux system protein)
                                            transmembrane     44    64    Phd
                                            transmembrane     109   126   Phd
                                            transmembrane     110   126   Psort
                                            transmembrane     141   158   Phd
                                            transmembrane     143   159   Psort
                                            transmembrane     180   196   Psort
                                            transmembrane     182   200   Phd
                                            transmembrane     198   214   Psort
                                            transmembrane     205   222   Phd

PG1240    potassium uptake protein          uncleavable       1     29    Psort
                                            signal
                                            non-globular      1     185   SEG
                                            transmembrane     19    35    Psort
                                            transmembrane     37    53    Psort
                                            transmembrane     102   118   Psort
                                            transmembrane     171   187   Psort
                                            non-globular      306   561   SEG
                                            transmembrane     385   401   Psort
                                            transmembrane     409   425   Psort
                                            transmembrane     443   459   Psort
                                            transmembrane     481   497   Psort
                                            transmembrane     543   559   Psort

PG1241.1  hypothetical protein              uncleavable       1     21    Psort
                                            signal

PG1242    tonB-linked outer membrane        gram negative     1     28    SignalP
          receptor PG47                     signal
                                            cleavable signal  1     28    Psort
                                            non-globular      426   522   SEG

PG1243    conserved hypothetical protein    non-globular      75    161   SEG
                                            transmembrane     152   168   Psort
                                            transmembrane     162   184   Phd
                                            non-globular      240   313   SEG

PG1245    DNA polymerase III subunit        non-globular      369   455   SEG
          gamma/tau
                                            coil-coil         458   506   Coils

PG1246    ISPg5-related orf-1               coil-coil         81    112   Coils

PG1248    penicillin-binding protein 4 (D-  gram negative     1     42    SignalP
          alanyl-D-alanine                  signal
          carboxypeptidase)

PG1249    peptidylarginine deiminase        gram negative     1     23    SignalP
                                            signal
                                            cleavable signal  1     23    Psort

PG1251    thiol protease (PrtT related)     gram negative     1     21    SignalP
                                            signal
                                            cleavable signal  1     21    Psort
                                            non-globular      354   470   SEG

PG1252    riboflavin synthase beta subunit  cleavable signal  1     21    Psort
          (6,7-dimethyl-8-ribityllumazine
          synthase) (DMRL synthase)
          (lumazine synthase)

PG1253    hypothetical protein              transmembrane     31    48    Phd
                                            transmembrane     31    47    Psort

PG1255    conserved hypothetical protein    transmembrane     22    38    Psort
                                            transmembrane     24    41    Phd
                                            coil-coil         116   143   Coils
                                            coil-coil         338   369   Coils
                                            transmembrane     377   394   Phd
                                            transmembrane     378   394   Psort
                                            non-globular      540   621   SEG

PG1256    probable exodeoxyribonuclease     coil-coil         1     71    Coils
          VII small subunit

PG1258    transposase                       coil-coil         49    76    Coils

PG1259    conserved hypothetical protein    coil-coil         405   444   Coils

PG1260    hypothetical protein              uncleavable       1     24    Psort
                                            signal
                                            transmembrane     13    29    Psort
                                            transmembrane     58    76    Phd
                                            transmembrane     59    75    Psort
                                            transmembrane     83    102   Phd
                                            transmembrane     87    103   Psort

PG1261    hypothetical protein              transmembrane     32    49    Phd
                                            transmembrane     33    49    Psort
                                            transmembrane     112   128   Psort
                                            transmembrane     113   130   Phd
                                            coil-coil         154   205   Coils

PG1262.1  hypothetical protein              transmembrane     81    97    Psort

PG1263    hypothetical protein              coil-coil         109   138   Coils

PG1265    conserved hypothetical protein    uncleavable       1     26    Psort
          (probable integral membrane       signal
          protein)
                                            non-globular      1     146   SEG
                                            transmembrane     8     24    Psort
                                            transmembrane     37    53    Psort
                                            transmembrane     83    99    Psort
                                            transmembrane     128   144   Psort
                                            transmembrane     156   172   Psort
                                            transmembrane     186   202   Psort
                                            transmembrane     228   244   Psort
                                            transmembrane     261   277   Psort
                                            transmembrane     310   326   Psort
                                            transmembrane     381   397   Psort
                                            transmembrane     406   422   Psort

PG1267    ISPG1 transposase (IS1106-like    transmembrane     58    74    Psort
          transposase)
                                            non-globular      138   235   SEG
                                            coil-coil         284   313   Coils

PG1267.1  conserved hypothetical protein    transmembrane     54    70    Psort
                                            transmembrane     84    100   Psort
                                            transmembrane     154   170   Psort
                                            transmembrane     187   203   Psort

PG1271    Tn5520-like integrase (transfer   coil-coil         61    88    Coils
          factor)

PG1273    conserved hypothetical protein    coil-coil         97    139   Coils

PG1278.1  hypothetical protein              gram negative     1     27    SignalP
                                            signal

PG1280    hypothetical protein              uncleavable       1     56    Psort
                                            signal
                                            transmembrane     52    68    Psort
                                            transmembrane     54    72    Phd
                                            transmembrane     85    101   Psort
                                            transmembrane     90    109   Phd
                                            transmembrane     128   150   Phd
                                            transmembrane     135   151   Psort
                                            transmembrane     160   176   Psort
                                            transmembrane     161   178   Phd
                                            transmembrane     183   203   Phd

PG1281    conserved hypothetical protein    transmembrane     21    37    Psort
                                            transmembrane     59    75    Psort
                                            transmembrane     83    99    Psort
                                            transmembrane     128   144   Psort
                                            transmembrane     146   162   Psort

PG1284    conserved hypothetical protein    non-globular      782   893   SEG

PG1285    hypothetical protein              transmembrane     24    40    Psort
                                            transmembrane     28    45    Phd
                                            transmembrane     46    62    Psort
                                            transmembrane     50    67    Phd
                                            transmembrane     107   124   Phd

PG1287    transfer region-related protein   may be a                      Psort
          TraQ                              lipoprotein
                                            gram negative     1     26    SignalP
                                            signal

PG1288    transfer region-related protein   gram negative     1     22    SignalP
          TraO                              signal
                                            cleavable signal  1     17    Psort
                                            transmembrane     149   165   Psort

PG1289    transfer region-related protein   gram negative     1     20    SignalP
          TraN                              signal
                                            cleavable signal  1     20    Psort

PG1290    transfer region-related protein   non-globular      1     79    SEG
          TraM
                                            transmembrane     44    60    Psort
                                            coil-coil         166   211   Coils

PG1291    transfer region-related protein   gram negative     1     42    SignalP
          TraK                              signal
                                            cleavable signal  1     42    Psort
                                            transmembrane     19    36    Phd

PG1292    hypothetical protein              transmembrane     28    44    Psort
                                            transmembrane     29    46    Phd

PG1293    transfer region-related protein   transmembrane     26    42    Psort
          TraJ
                                            transmembrane     63    79    Psort
                                            coil-coil         88    115   Coils
                                            transmembrane     192   208   Psort
                                            transmembrane     224   240   Psort
                                            transmembrane     270   286   Psort
                                            non-globular      270   368   SEG

PG1295    transfer region-related protein   gram negative     1     21    SignalP
          TraI                              signal
                                            cleavable signal  1     21    Psort
                                            coil-coil         35    62    Coils
                                            coil-coil         125   159   Coils

PG1296    transfer region-related protein   non-globular      141   260   SEG
          TraG
                                            coil-coil         274   301   Coils
                                            transmembrane     645   661   Psort
                                            coil-coil         813   841   Coils

PG1297    transfer region-related protein   transmembrane     22    38    Psort
          TraF
                                            transmembrane     25    42    Phd
                                            transmembrane     47    64    Phd

PG1298    transfer region-related protein   gram negative     1     22    SignalP
          TraE                              signal
                                            cleavable signal  1     22    Psort
                                            transmembrane     44    61    Phd
                                            transmembrane     47    63    Psort
                                            transmembrane     81    98    Phd
                                            transmembrane     84    100   Psort

PG1299    hypothetical protein              uncleavable       1     24    Psort
                                            signal
                                            transmembrane     2     18    Psort
                                            non-globular      45    234   SEG

PG1306    probable mobilization protein C   uncleavable       1     21    Psort
                                            signal
                                            transmembrane     17    34    Phd
                                            transmembrane     60    77    Phd
                                            transmembrane     64    80    Psort
                                            transmembrane     97    113   Psort
                                            transmembrane     102   120   Phd
                                            transmembrane     123   139   Psort
                                            transmembrane     125   142   Phd
                                            transmembrane     313   329   Psort
                                            transmembrane     316   333   Phd
                                            coil-coil         630   658   Coils

PG1306.1  hypothetical protein              transmembrane     71    87    Psort

PG1307    hypothetical protein              gram negative     1     21    SignalP
                                            signal
                                            cleavable signal  1     19    Psort

PG1308    conserved hypothetical protein    cleavable signal  1     27    Psort
                                            non-globular      199   287   SEG
                                            non-globular      624   685   SEG

PG1309    hypothetical protein              non-globular      369   437   SEG

PG1310    DNA topoisomerase III             non-globular      471   602   SEG

PG1313    hypothetical protein              transmembrane     254   274   Phd

PG1314    hypothetical protein              transmembrane     29    46    Phd
                                            transmembrane     29    45    Psort
                                            transmembrane     51    75    Phd
                                            transmembrane     55    71    Psort

PG1315    conserved hypothetical protein    coil-coil         1     45    Coils
                                            coil-coil         483   540   Coils
                                            coil-coil         680   711   Coils

PG1316    hypothetical protein              transmembrane     50    66    Psort

PG1316.1  hypothetical protein              transmembrane     123   139   Psort

PG1318    conserved hypothetical protein    coil-coil         36    70    Coils
                                            non-globular      157   224   SEG

PG1319    possible oxygen-independent       transmembrane     195   211   Psort
          coproporphyrinogen III oxidase

PG1319.1  hypothetical protein              uncleavable       1     20    Psort
                                            signal
                                            transmembrane     4     20    Psort
                                            transmembrane     62    78    Psort
                                            transmembrane     99    115   Psort

PG1320    hypothetical protein              may be a                      Psort
                                            lipoprotein

PG1321    hypothetical protein              may be a                      Psort
                                            lipoprotein
                                            gram negative     1     21    SignalP
                                            signal

PG1324    phosphoglycerate mutase           uncleavable       1     19    Psort
                                            signal
                                            transmembrane     10    26    Psort
                                            transmembrane     12    29    Phd
                                            transmembrane     94    111   Phd

PG1327    hypothetical protein              uncleavable       1     59    Psort
                                            signal
                                            transmembrane     2     19    Phd
                                            transmembrane     3     19    Psort
                                            transmembrane     35    52    Phd
                                            transmembrane     57    81    Phd
                                            transmembrane     62    78    Psort
                                            transmembrane     266   283   Phd
                                            transmembrane     271   287   Psort
                                            coil-coil         381   416   Coils
                                            coil-coil         430   458   Coils

PG1333    2-succinyl-6-hydroxy-2,4-         transmembrane     140   156   Psort
          cyclohexadiene-1-carboxylate
          synthase (2-oxoglutarate
          decarboxylase) (alpha-
          ketoglutarate decarboxylase)
          (menaquinone biosynthesis
          protein)

PG1336    conserved hypothetical protein    transmembrane     425   441   Psort

PG1337    hypothetical protein              transmembrane     522   538   Psort

PG1338    hypothetical protein              coil-coil         32    66    Coils

PG1340    conserved hypothetical protein    transmembrane     527   543   Psort

PG1342    hypothetical protein              transmembrane     82    98    Psort

PG1343    cell-division protein ftsX        uncleavable       1     24    Psort
                                            signal
                                            transmembrane     19    36    Phd
                                            transmembrane     20    36    Psort
                                            transmembrane     163   179   Psort
                                            transmembrane     165   183   Phd
                                            transmembrane     218   237   Phd
                                            transmembrane     223   239   Psort
                                            transmembrane     258   274   Psort
                                            transmembrane     259   276   Phd

PG1344    hypothetical protein              gram negative     1     55    SignalP
                                            signal
                                            transmembrane     32    48    Psort
                                            transmembrane     33    50    Phd
                                            transmembrane     71    88    Phd
                                            transmembrane     75    91    Psort

PG1345    undecaprenol kinase; bacitracin   uncleavable       1     32    Psort
          resistance protein                signal
                                            transmembrane     3     19    Psort
                                            transmembrane     21    38    Phd
                                            transmembrane     43    61    Phd
                                            transmembrane     44    60    Psort
                                            transmembrane     89    106   Phd
                                            transmembrane     91    107   Psort
                                            transmembrane     116   134   Phd
                                            transmembrane     119   135   Psort
                                            transmembrane     152   168   Psort
                                            transmembrane     153   171   Phd
                                            transmembrane     190   207   Phd
                                            transmembrane     226   242   Psort
                                            transmembrane     227   251   Phd
                                            transmembrane     256   276   Phd
                                            transmembrane     262   278   Psort

PG1346    tRNA pseudouridine synthase B     uncleavable       1     32    Psort
          (tRNA pseudouridine 55 synthase)  signal
          (PSI55 synthase)
          (pseudouridylate synthase)
          (uracil hydrolyase)
                                            transmembrane     3     19    Psort

PG1348    7,8-dihydro-6-                    transmembrane     118   134   Psort
          hydroxymethylpterin
          pyrophosphokinase (2-amino-4-
          hydroxy-6-
          hydroxymethyldihydropteridine
          pyrophosphokinase) (6-
          hydroxymethyl-7,8-dihydropterin
          pyrophosphokinase)

PG1356    protease/hemagglutinin PrtT       uncleavable       1     44    Psort
                                            signal
                                            transmembrane     5     21    Psort
                                            transmembrane     49    65    Psort

PG1358    tonB-dependent receptor HmuR (or  gram negative     1     24    SignalP
          HemR)                             signal
                                            cleavable signal  1     24    Psort

PG1359    magnesium-protoporphyrin O-       cleavable signal  1     50    Psort
          methyltransferase; cobalamin
          biosynthesis protein N
                                            transmembrane     7     24    Phd
                                            coil-coil         762   789   Coils
                                            coil-coil         827   863   Coils
                                            non-globular      1361  1429  SEG
                                            transmembrane     1444  1461  Phd
                                            transmembrane     1445  1461  Psort

PG1360    hypothetical protein              cleavable signal  1     45    Psort
                                            transmembrane     30    47    Phd
                                            transmembrane     67    84    Phd
                                            transmembrane     68    84    Psort
                                            transmembrane     97    114   Phd
                                            transmembrane     103   119   Psort
                                            transmembrane     119   143   Phd
                                            transmembrane     125   141   Psort
                                            transmembrane     161   178   Phd
                                            transmembrane     161   177   Psort
                                            transmembrane     194   213   Phd
                                            transmembrane     197   213   Psort

PG1361    conserved hypothetical protein    uncleavable       1     14    Psort
                                            signal
                                            transmembrane     16    34    Phd
                                            transmembrane     19    35    Psort
                                            transmembrane     119   136   Phd
                                            transmembrane     120   136   Psort
                                            transmembrane     152   170   Phd
                                            transmembrane     157   173   Psort

PG1363    conserved hypothetical protein    transmembrane     20    36    Psort

PG1366    dTDP-4-keto-L-rhamnose reductase  non-globular      73    133   SEG
          (dTDP-L-rhamnose synthase)

PG1369    dTDP-4-dehydrorhamnose 3,5-       cleavable signal  1     17    Psort
          epimerase
                                            transmembrane     21    37    Psort
                                            transmembrane     64    80    Psort
                                            transmembrane     145   161   Psort
                                            transmembrane     183   199   Psort
                                            transmembrane     546   562   Psort

PG1370    3-deoxy-D-manno-2-octulosonic     cleavable signal  1     59    Psort
          acid (Kdo transferase)

PG1374    conserved hypothetical protein    uncleavable       1     43    Psort
                                            signal
                                            non-globular      1     268   SEG
                                            transmembrane     3     19    Psort
                                            transmembrane     25    41    Psort
                                            transmembrane     69    85    Psort
                                            transmembrane     112   128   Psort
                                            transmembrane     165   181   Psort
                                            transmembrane     190   206   Psort
                                            transmembrane     218   234   Psort
                                            transmembrane     252   268   Psort

PG1375    possible cAMP receptor protein    cleavable signal  1     32    Psort
          (catabolite gene activator)
          (cAMP-regulatory protein)
                                            coil-coil         219   270   Coils

PG1376    l-aspartate oxidase (quinolinate  cleavable signal  1     54    Psort
          synthetase B)
                                            non-globular      61    130   SEG

PG1379    probable methanol dehydrogenase   non-globular      1     81    SEG
          regulator
                                            transmembrane     38    54    Psort

PG1380    conserved hypothetical protein    non-globular      69    113   SEG

PG1381    conserved hypothetical protein    gram negative     1     25    SignalP
                                            signal
                                            cleavable signal  1     25    Psort
                                            transmembrane     165   182   Phd
                                            transmembrane     167   183   Psort
                                            coil-coil         207   241   Coils

PG1382    bacteroides aerotolerance operon  cleavable signal  1     26    Psort
          protein, batA
                                            transmembrane     8     25    Phd
                                            transmembrane     55    72    Phd
                                            transmembrane     56    72    Psort
                                            transmembrane     301   318   Phd
                                            transmembrane     302   318   Psort

PG1383    bacteroides aerotolerance operon  cleavable signal  1     26    Psort
          protein, batB
                                            transmembrane     9     26    Phd
                                            transmembrane     60    77    Phd
                                            transmembrane     60    76    Psort
                                            transmembrane     307   324   Phd
                                            transmembrane     307   323   Psort

PG1384    bacteroides aerotolerance operon  gram negative     1     24    SignalP
          protein, batC                     signal
                                            cleavable signal  1     24    Psort
                                            non-globular      147   202   SEG
                                            coil-coil         203   247   Coils

PG1385    bacteroides aerotolerance operon  gram negative     1     21    SignalP
          protein, batD                     signal
                                            cleavable signal  1     29    Psort
                                            non-globular      107   160   SEG
                                            transmembrane     449   466   Phd
                                            transmembrane     452   468   Psort

PG1386    bacteroides aerotolerance operon  gram negative     1     28    SignalP
          protein, batE                     signal
                                            cleavable signal  1     28    Psort
                                            non-globular      32    104   SEG
                                            transmembrane     169   193   Phd
                                            transmembrane     179   195   Psort
                                            transmembrane     206   223   Phd
                                            transmembrane     208   224   Psort

PG1387    hypothetical protein              transmembrane     29    48    Phd
                                            transmembrane     34    50    Psort
                                            transmembrane     58    75    Phd
                                            transmembrane     59    75    Psort
                                            transmembrane     114   131   Phd
                                            transmembrane     136   160   Phd
                                            transmembrane     156   172   Psort
                                            transmembrane     165   182   Phd
                                            transmembrane     206   223   Phd
                                            transmembrane     207   223   Psort

PG1388    conserved hypothetical protein    cleavable signal  1     25    Psort
                                            transmembrane     10    27    Phd
                                            transmembrane     34    50    Psort
                                            transmembrane     38    56    Phd
                                            transmembrane     61    78    Phd
                                            transmembrane     61    77    Psort
                                            transmembrane     178   195   Phd
                                            transmembrane     178   194   Psort

PG1389    dihydropterin                     cleavable signal  1     22    Psort
          pyrophosphokinase/dihydropteroat
          e synthase

PG1390    conserved hypothetical protein    coil-coil         313   340   Coils

PG1391    conserved hypothetical protein    cleavable signal  1     22    Psort
                                            non-globular      249   463   SEG
                                            transmembrane     259   275   Psort
                                            transmembrane     290   306   Psort
                                            transmembrane     309   325   Psort
                                            transmembrane     333   349   Psort
                                            transmembrane     352   368   Psort
                                            transmembrane     384   400   Psort
                                            transmembrane     413   429   Psort

PG1392    shikimate kinase                  non-globular      1     82    SEG
                                            coil-coil         157   186   Coils

PG1393    possible competence protein       uncleavable       1     57    Psort
                                            signal
                                            transmembrane     12    28    Psort
                                            transmembrane     35    51    Psort
                                            transmembrane     37    54    Phd
                                            transmembrane     63    79    Psort
                                            transmembrane     66    83    Phd
                                            non-globular      169   257   SEG
                                            transmembrane     259   277   Phd
                                            transmembrane     267   283   Psort
                                            transmembrane     300   317   Phd
                                            transmembrane     303   319   Psort
                                            transmembrane     334   351   Phd
                                            transmembrane     356   374   Phd
                                            transmembrane     356   372   Psort
                                            transmembrane     392   409   Phd
                                            transmembrane     393   409   Psort
                                            transmembrane     414   438   Phd
                                            transmembrane     428   444   Psort
                                            transmembrane     443   460   Phd
                                            transmembrane     445   461   Psort
                                            transmembrane     486   503   Phd
                                            transmembrane     486   502   Psort

PG1396    probable DNAK suppressor protein  coil-coil         16    65    Coils

PG1397    possible lipoprotein signal       uncleavable       1     61    Psort
          peptidase                         signal
                                            transmembrane     14    31    Phd
                                            transmembrane     14    30    Psort
                                            transmembrane     66    85    Phd
                                            transmembrane     68    84    Psort
                                            transmembrane     98    114   Psort
                                            transmembrane     102   123   Phd
                                            transmembrane     152   169   Phd
                                            transmembrane     180   199   Phd
                                            transmembrane     182   198   Psort

PG1398    conserved hypothetical protein    may be a                      Psort
                                            lipoprotein
                                            gram negative     1     27    SignalP
                                            signal
                                            coil-coil         91    122   Coils

PG1399    hypothetical protein              uncleavable       1     60    Psort
                                            signal
                                            transmembrane     7     23    Psort
                                            transmembrane     41    59    Phd
                                            transmembrane     82    98    Psort
                                            transmembrane     86    103   Phd
                                            transmembrane     118   142   Phd
                                            transmembrane     129   145   Psort
                                            transmembrane     157   174   Phd
                                            transmembrane     161   177   Psort
                                            transmembrane     183   200   Phd
                                            transmembrane     212   229   Phd
                                            transmembrane     214   230   Psort
                                            transmembrane     236   252   Psort
                                            transmembrane     239   256   Phd
                                            transmembrane     273   291   Phd
                                            transmembrane     279   295   Psort
                                            transmembrane     303   319   Psort
                                            transmembrane     306   323   Phd

PG1401    conserved hypothetical protein    transmembrane     25    41    Psort

PG1403    immunoreactive 84kD antigen PG93  gram negative     1     25    SignalP
                                            signal
                                            cleavable signal  1     25    Psort
                                            non-globular      622   691   SEG

PG1405    probable voltage-gated potassium  gram negative     1     42    SignalP
          channel (potassium channel        signal
          protein)
                                            transmembrane     30    46    Psort
                                            transmembrane     63    79    Psort
                                            non-globular      106   175   SEG
                                            transmembrane     146   162   Psort
                                            transmembrane     203   219   Psort

PG1406    oxaloacetate decarboxylase beta   transmembrane     25    42    Phd
          subunit
                                            transmembrane     27    43    Psort
                                            transmembrane     47    64    Phd
                                            transmembrane     50    66    Psort
                                            transmembrane     94    111   Phd
                                            transmembrane     97    113   Psort
                                            transmembrane     116   137   Phd
                                            transmembrane     118   134   Psort
                                            transmembrane     147   164   Phd
                                            transmembrane     169   186   Phd
                                            transmembrane     172   188   Psort
                                            transmembrane     222   238   Psort
                                            transmembrane     225   242   Phd
                                            transmembrane     265   282   Phd
                                            transmembrane     265   281   Psort
                                            transmembrane     290   314   Phd
                                            transmembrane     294   310   Psort
                                            transmembrane     364   381   Phd
                                            transmembrane     365   381   Psort

PG1407    probable oxaloacetate             non-globular      1     144   SEG
          decarboxylase alpha subunit

PG1407.1  hypothetical protein              transmembrane     76    92    Psort

PG1408    conserved hypothetical protein    gram negative     1     23    SignalP
                                            signal
                                            cleavable signal  1     26    Psort
                                            non-globular      120   184   SEG
                                            transmembrane     202   226   Phd
                                            transmembrane     206   222   Psort

PG1412    succinate dehydrogenase iron-     transmembrane     167   184   Phd
          sulfur subunit

PG1413    fumarate reductase/succinate      transmembrane     37    53    Psort
          dehydrogenase flavoprotein
          subunit
                                            non-globular      129   248   SEG

PG1414    hypothetical protein              gram negative     1     38    SignalP
                                            signal
                                            cleavable signal  1     30    Psort
                                            transmembrane     17    35    Phd
                                            transmembrane     49    73    Phd
                                            transmembrane     60    76    Psort
                                            transmembrane     105   121   Psort
                                            transmembrane     107   124   Phd
                                            transmembrane     162   182   Phd
                                            transmembrane     163   179   Psort
                                            transmembrane     206   226   Phd
                                            transmembrane     207   223   Psort

PG1414.1  hypothetical protein              transmembrane     35    51    Psort
                                            transmembrane     113   129   Psort

PG1417    hypothetical protein              gram negative     1     25    SignalP
                                            signal
                                            cleavable signal  1     20    Psort

PG1418    conserved hypothetical protein    gram negative     1     23    SignalP
                                            signal
                                            cleavable signal  1     23    Psort

PG1419    DNA gyrase subunit A              non-globular      234   318   SEG
          (topoisomerase)
                                            coil-coil         363   413   Coils
                                            coil-coil         439   473   Coils
                                            non-globular      800   898   SEG

PG1420    probable membrane-bound           gram negative     1     29    SignalP
          regulatory protein NosR           signal
                                            cleavable signal  1     49    Psort
                                            transmembrane     193   210   Phd
                                            transmembrane     193   209   Psort
                                            transmembrane     215   232   Phd
                                            transmembrane     220   236   Psort
                                            transmembrane     253   271   Phd
                                            transmembrane     255   271   Psort
                                            transmembrane     310   327   Phd
                                            transmembrane     315   331   Psort
                                            transmembrane     341   363   Phd
                                            transmembrane     347   363   Psort

PG1421    hypothetical protein              may be a                      Psort
                                            lipoprotein
                                            transmembrane     82    98    Psort
                                            transmembrane     84    101   Phd
                                            transmembrane     114   131   Phd

PG1422    ISPg1 transposase (IS1106-like    transmembrane     58    74    Psort
          transposase)
                                            non-globular      138   235   SEG
                                            coil-coil         284   313   Coils

PG1423    hypothetical protein              gram negative     1     25    SignalP
                                            signal
                                            cleavable signal  1     25    Psort
                                            non-globular      33    400   SEG

PG1424    possible outer membrane-          gram negative     1     33    SignalP
          associated protein P58            signal
                                            cleavable signal  1     35    Psort
                                            transmembrane     374   390   Psort

PG1427    galactokinase (galactose kinase)  non-globular      204   314   SEG

PG1428    hypothetical protein              gram negative     1     25    SignalP
                                            signal
                                            cleavable signal  1     22    Psort

PG1429    hypothetical protein              gram negative     1     32    SignalP
                                            signal
                                            cleavable signal  1     25    Psort

PG1430    cell division protein (ATPase)    transmembrane     83    99    Psort
                                            transmembrane     84    101   Phd
                                            transmembrane     148   166   Phd
                                            transmembrane     154   170   Psort
                                            transmembrane     180   197   Phd
                                            transmembrane     180   196   Psort
                                            transmembrane     227   245   Phd
                                            transmembrane     228   244   Psort
                                            non-globular      264   371   SEG
                                            transmembrane     636   652   Psort

PG1431    thioredoxin family protein        coil-coil         87    139   Coils

PG1432    DNA-damage-inducible protein F    uncleavable       1     43    Psort
                                            signal
                                            non-globular      1     436   SEG
                                            transmembrane     13    29    Psort
                                            transmembrane     42    58    Psort
                                            transmembrane     87    103   Psort
                                            transmembrane     126   142   Psort
                                            transmembrane     157   173   Psort
                                            transmembrane     189   205   Psort
                                            transmembrane     259   275   Psort
                                            transmembrane     314   330   Psort
                                            transmembrane     347   363   Psort
                                            transmembrane     383   399   Psort

PG1433    protein-tyrosine-phosphatase      cleavable signal  1     22    Psort
          (low molecular weight protein-
          tyrosine-phosphatase)

PG1434    cation-transporting ATPase        transmembrane     96    112   Psort
                                            transmembrane     158   174   Psort
                                            transmembrane     183   199   Psort
                                            non-globular      292   463   SEG
                                            transmembrane     339   355   Psort
                                            transmembrane     368   384   Psort
                                            non-globular      684   735   SEG
                                            transmembrane     685   701   Psort

PG1435    probable cation-transporting      gram negative     1     41    SignalP
          ATPase                            signal

PG1437    ISPg5-related orf-1               coil-coil         79    110   Coils

PG1438    cardiolipin synthase              cleavable signal  1     18    Psort
                                            transmembrane     32    49    Phd
                                            transmembrane     34    50    Psort
                                            transmembrane     192   209   Phd
                                            transmembrane     254   271   Phd
                                            transmembrane     337   354   Phd
                                            transmembrane     340   356   Psort

PG1440    GTP pyrophosphokinase, (p)ppGpp   transmembrane     70    86    Psort
          synthetase
                                            transmembrane     137   153   Psort
                                            coil-coil         485   513   Coils

PG1441    conserved hypothetical protein    gram negative     1     21    SignalP
          (possible TPR-repeat protein)     signal
                                            cleavable signal  1     21    Psort
                                            non-globular      119   184   SEG
                                            coil-coil         185   239   Coils
                                            non-globular      269   366   SEG
                                            non-globular      465   557   SEG
                                            non-globular      725   824   SEG

PG1442    probable integral outer membrane  cleavable signal  1     27    Psort
          protein P64

PG1445    methylmalonyl-CoA mutase alpha    coil-coil         93    142   Coils
          subunit
                                            non-globular      511   618   SEG

PG1446    methylmalonyl-CoA mutase beta     transmembrane     158   174   Psort
          subunit

PG1447    ISPg4 transposase                 uncleavable       1     51    Psort
                                            signal
                                            transmembrane     321   337   Psort

PG1448    hypothetical protein              transmembrane     51    68    Phd
                                            transmembrane     51    67    Psort
                                            transmembrane     98    115   Phd
                                            transmembrane     100   116   Psort

PG1449    RNA polymerase sigma factor, ECF  non-globular      81    174   SEG
          subfamily (sigma-70)

PG1450    hypothetical protein              transmembrane     61    77    Psort
                                            transmembrane     99    115   Psort

PG1452    conserved hypothetical            transmembrane     23    39    Psort
          protein/possible ABC element
          with MSD domain
                                            transmembrane     24    41    Phd
                                            transmembrane     206   223   Phd
                                            transmembrane     284   303   Phd
                                            transmembrane     284   300   Psort
                                            transmembrane     331   354   Phd
                                            transmembrane     337   353   Psort
                                            transmembrane     388   405   Phd
                                            transmembrane     388   404   Psort

PG1453    ABC transporter element with MSD  transmembrane     24    40    Psort
          domain
                                            transmembrane     28    45    Phd
                                            transmembrane     279   303   Phd
                                            transmembrane     288   304   Psort
                                            transmembrane     342   360   Phd
                                            transmembrane     346   362   Psort
                                            transmembrane     384   404   Phd
                                            transmembrane     387   403   Psort

PG1454    possible periplasmic protein      gram negative     1     30    SignalP
                                            signal
                                            cleavable signal  1     30    Psort
                                            coil-coil         101   170   Coils

PG1455    outer membrane protein P49        gram negative     1     21    SignalP
                                            signal
                                            uncleavable       1     21    Psort
                                            signal
                                            transmembrane     5     21    Psort
                                            coil-coil         121   176   Coils
                                            non-globular      181   322   SEG
                                            coil-coil         356   444   Coils

PG1459    hypothetical protein              non-globular      1     141   SEG
                                            cleavable signal  1     47    Psort

PG1461    ISPg4 transposase                 uncleavable       1     51    Psort
                                            signal
                                            transmembrane     283   300   Phd
                                            transmembrane     321   337   Psort
                                            transmembrane     324   341   Phd

PG1462    hypothetical protein              coil-coil         13    49    Coils

PG1464    phosphoenolpyruvate               transmembrane     352   368   Psort
          carboxykinase

PG1465    phosphoglycerate kinase           non-globular      74    418   SEG
          (cytosolic phosphoglycerate
          kinase)

PG1466    conserved hypothetical protein;   cleavable signal  1     34    Psort
          possible ABC element with MSD
          domain
                                            non-globular      1     164   SEG
                                            transmembrane     41    57    Psort
                                            transmembrane     93    109   Psort
                                            transmembrane     117   133   Psort
                                            transmembrane     147   163   Psort
                                            transmembrane     177   193   Psort
                                            transmembrane     253   269   Psort
                                            transmembrane     278   294   Psort
                                            transmembrane     325   341   Psort
                                            transmembrane     354   370   Psort
                                            transmembrane     397   413   Psort
                                            transmembrane     425   441   Psort

PG1468    glycogen debranching enzyme/4-    non-globular      176   248   SEG
          alpha-glucanotransferase

PG1470    alpha-amylase                     coil-coil         392   428   Coils

PG1471    hypothetical protein              gram negative     1     22    SignalP
                                            signal
                                            cleavable signal  1     22    Psort

PG1472    hypothetical protein              gram negative     1     24    SignalP
                                            signal
                                            cleavable signal  1     24    Psort

PG1472.1  conserved hypothetical protein    gram negative     1     39    SignalP
                                            signal
                                            transmembrane     86    102   Psort

PG1474    transcription elongation factor   non-globular      1     156   SEG
          (GreA) (trancript cleavage
          factor)

PG1475    possible translation factor       non-globular      118   200   SEG

PG1476    conserved hypothetical protein;   cleavable signal  1     43    Psort
          possible DNA uptake-related
          protein
                                            transmembrane     13    30    Phd

PG1477    ABC transporter ATPase            non-globular      1     86    SEG
          (lipoprotein releasing system
          ATP-binding protein LolD)

PG1478    conserved hypothetical protein    non-globular      83    211   SEG

PG1479    conserved hypothetical protein    gram negative     1     58    SignalP
                                            signal
                                            transmembrane     30    46    Psort

PG1481    restriction endonuclease          uncleavable       1     21    Psort
                                            signal
                                            non-globular      646   742   SEG

PG1485    probable thiol-disulfide          gram negative     1     29    SignalP
          interchange protein; inner        signal
          membrane copper tolerance
          protein
                                            cleavable signal  1     29    Psort
                                            non-globular      145   227   SEG
                                            transmembrane     230   246   Psort
                                            transmembrane     233   252   Phd
                                            transmembrane     277   294   Phd
                                            transmembrane     279   295   Psort
                                            transmembrane     307   324   Phd
                                            transmembrane     310   326   Psort
                                            transmembrane     348   364   Psort
                                            transmembrane     352   374   Phd
                                            transmembrane     391   408   Phd
                                            transmembrane     392   408   Psort
                                            transmembrane     427   444   Phd
                                            transmembrane     427   443   Psort
                                            transmembrane     457   474   Phd
                                            transmembrane     458   474   Psort
                                            transmembrane     494   511   Phd
                                            transmembrane     494   510   Psort

PG1487    hypothetical protein              cleavable signal  1     52    Psort
                                            transmembrane     30    47    Phd
                                            transmembrane     66    82    Psort
                                            transmembrane     72    96    Phd
                                            transmembrane     89    105   Psort

PG1489    hypothetical protein              transmembrane     31    48    Phd
                                            transmembrane     31    47    Psort
                                            coil-coil         55    103   Coils

PG1490    ISPg5-related orf-1               coil-coil         79    110   Coils

PG1492    conserved hypothetical protein    may be a                      Psort
                                            lipoprotein

PG1493    conserved hypothetical protein    cleavable signal  1     47    Psort
          (immunoreactive 89kD antigen
          PG87)

PG1494    conserved hypothetical protein    gram negative     1     21    SignalP
          (possible phage shock protein)    signal
                                            cleavable signal  1     21    Psort

PG1496    conserved hypothetical protein    cleavable signal  1     57    Psort
                                            non-globular      273   335   SEG

PG1497    ABC transporter, ATP-binding      transmembrane     28    45    Phd
          protein, MsbA family; MSD-NBD
          fusion protein
                                            transmembrane     28    44    Psort
                                            transmembrane     98    117   Phd
                                            transmembrane     99    115   Psort
                                            transmembrane     187   211   Phd
                                            transmembrane     196   212   Psort
                                            transmembrane     293   310   Phd
                                            transmembrane     294   310   Psort
                                            transmembrane     316   333   Phd
                                            transmembrane     316   332   Psort

PG1498    auxin-responsive protein          non-globular      1     57    SEG
          homologue
                                            transmembrane     215   231   Psort

PG1499    ribonuclease II                   non-globular      229   278   SEG
                                            coil-coil         370   404   Coils

PG1502    O-sialoglycoprotein               transmembrane     136   152   Psort
          endopeptidase (glycoprotease)

PG1504    hypothetical protein              gram negative     1     24    SignalP
                                            signal
                                            cleavable signal  1     24    Psort

PG1505    conserved hypothetical protein    non-globular      196   243   SEG

PG1507    thiol peroxidase                  gram negative     1     20    SignalP
                                            signal
                                            uncleavable       1     14    Psort
                                            signal
                                            transmembrane     2     18    Psort

PG1509    3-dehydroquinate dehydratase      transmembrane     82    98    Psort

PG1512    hypothetical protein              gram negative     1     29    SignalP
                                            signal
                                            transmembrane     17    33    Psort
                                            transmembrane     23    47    Phd
                                            transmembrane     36    52    Psort
                                            transmembrane     67    91    Phd
                                            transmembrane     67    83    Psort
                                            transmembrane     95    111   Psort
                                            transmembrane     96    120   Phd
                                            transmembrane     125   143   Phd
                                            transmembrane     125   141   Psort
                                            transmembrane     155   176   Phd
                                            transmembrane     156   172   Psort
                                            transmembrane     191   207   Psort
                                            transmembrane     193   210   Phd
                                            transmembrane     225   242   Phd
                                            transmembrane     226   242   Psort
                                            transmembrane     272   290   Phd

PG1513    hypothetical protein              non-globular      124   184   SEG

PG1515    glucose kinase                    transmembrane     142   158   Psort

PG1516    hypothetical protein              gram negative     1     23    SignalP
                                            signal
                                            cleavable signal  1     23    Psort
                                            transmembrane     28    45    Phd
                                            transmembrane     32    48    Psort
                                            transmembrane     59    75    Psort
                                            transmembrane     60    77    Phd
                                            transmembrane     82    99    Phd
                                            transmembrane     125   142   Phd
                                            transmembrane     147   165   Phd
                                            transmembrane     151   167   Psort
                                            transmembrane     177   193   Psort
                                            transmembrane     178   195   Phd
                                            transmembrane     261   278   Phd
                                            transmembrane     279   295   Psort
                                            transmembrane     283   307   Phd
                                            transmembrane     299   315   Psort
                                            transmembrane     312   329   Phd

PG1517    probable exopolyphosphatase       transmembrane     160   177   Phd

PG1520.1  hypothetical protein              transmembrane     83    99    Psort

PG1521    uridine kinase                    non-globular      117   199   SEG
                                            non-globular      465   529   SEG

PG1522    ISPg2 (PGIS2) transposase         transmembrane     22    38    Psort
                                            coil-coil         43    70    Coils
                                            non-globular      331   376   SEG

PG1524    transketolase                     transmembrane     413   429   Psort
                                            non-globular      534   675   SEG

PG1525    possible alpha-1,3/4-fucosidase   gram negative     1     24    SignalP
          precursor                         signal
                                            uncleavable       1     19    Psort
                                            signal
                                            transmembrane     4     20    Psort

PG1526    NifS-like cysteine sulfinate      transmembrane     247   263   Psort
          desulfinase (cysteine
          desulfurase)

PG1528    probable acylaminoacyl            gram negative     1     20    SignalP
          peptidase; alanyl dipeptidyl      signal
          peptidase
                                            cleavable signal  1     17    Psort
                                            non-globular      131   199   SEG

PG1530    hypothetical protein              cleavable signal  1     21    Psort

PG1530.1  hypothetical protein              transmembrane     28    44    Psort

PG1532    ABC transporter (SBP domain);     gram negative     1     46    SignalP
          adhesin                           signal
                                            transmembrane     20    36    Psort

PG1533    ABC transporter/NBD protein for   transmembrane     144   160   Psort
          possibly Zn/Mn

PG1536    protein translocation membrane    non-globular      33    76    SEG
          protein SECF
                                            non-globular      203   286   SEG
                                            non-globular      442   679   SEG
                                            transmembrane     458   474   Psort
                                            transmembrane     486   502   Psort
                                            transmembrane     504   520   Psort
                                            transmembrane     557   573   Psort
                                            transmembrane     584   600   Psort
                                            transmembrane     644   660   Psort
                                            transmembrane     774   790   Psort
                                            transmembrane     799   815   Psort
                                            transmembrane     836   852   Psort
                                            non-globular      875   944   SEG
                                            transmembrane     887   903   Psort
                                            transmembrane     909   925   Psort

PG1538    3-oxoacyl-acyl-carrier-protein    uncleavable       1     35    Psort
          synthase                          signal
                                            transmembrane     342   358   Psort

PG1539    phosphoribosylglycinamide         transmembrane     74    90    Psort
          formyltransferase

PG1540    hypothetical protein              cleavable signal  1     32    Psort

PG1541    competence protein ComM           non-globular      65    163   SEG
                                            transmembrane     83    99    Psort

PG1542    hypothetical protein              transmembrane     48    64    Psort

PG1543    hypothetical protein              may be a                      Psort
                                            lipoprotein
                                            gram negative     1     22    SignalP
                                            signal

PG1544    hypothetical protein              transmembrane     170   186   Psort

PG1545    phenylalanyl-tRNA synthetase      coil-coil         52    83    Coils
          alpha subunit

PG1548    hypothetical protein              gram negative     1     22    SignalP
                                            signal
                                            cleavable signal  1     20    Psort
                                            transmembrane     211   227   Psort

PG1549    transcription repair coupling     non-globular      148   246   SEG
          factor (TRCF) helicase
                                            non-globular      900   1046  SEG

PG1550    GrpE-related chaperonin; HSP-70   coil-coil         48    86    Coils
          cofactor

PG1552    DnaJ protein                      non-globular      70    196   SEG

PG1557    uridine kinase                    transmembrane     100   116   Psort

PG1558    conserved hypothetical protein    cleavable signal  1     29    Psort
                                            transmembrane     13    30    Phd
                                            transmembrane     69    93    Phd
                                            transmembrane     73    89    Psort
                                            transmembrane     113   129   Psort
                                            transmembrane     117   141   Phd
                                            transmembrane     131   147   Psort
                                            transmembrane     157   173   Psort
                                            transmembrane     158   176   Phd
                                            transmembrane     186   202   Psort
                                            transmembrane     187   204   Phd
                                            transmembrane     252   268   Psort
                                            transmembrane     253   270   Phd
                                            transmembrane     277   293   Psort
                                            transmembrane     281   305   Phd
                                            transmembrane     329   347   Phd
                                            transmembrane     352   368   Psort
                                            transmembrane     354   373   Phd

PG1562    probable integral outer membrane  gram negative     1     20    SignalP
          protein P30                       signal
                                            cleavable signal  1     20    Psort

PG1563    hypothetical protein              uncleavable       1     53    Psort
                                            signal
                                            transmembrane     8     24    Psort

PG1564    conserved hypothetical protein    gram negative     1     43    SignalP
                                            signal
                                            transmembrane     27    43    Psort

PG1565    peptidyl-dipeptidase Dcp          non-globular      592   678   SEG

PG1566    conserved hypothetical protein    gram negative     1     21    SignalP
                                            signal
                                            cleavable signal  1     21    Psort

PG1567    Na+/H+-exchanging protein         cleavable signal  1     30    Psort
          (Na+/H+ antiporter)
                                            transmembrane     74    91    Phd
                                            transmembrane     74    90    Psort
                                            transmembrane     100   118   Phd
                                            transmembrane     101   117   Psort
                                            transmembrane     136   152   Psort
                                            transmembrane     137   154   Phd
                                            transmembrane     169   185   Psort
                                            transmembrane     170   187   Phd
                                            transmembrane     202   219   Phd
                                            transmembrane     204   220   Psort
                                            transmembrane     242   259   Phd
                                            transmembrane     242   258   Psort
                                            transmembrane     265   285   Phd
                                            transmembrane     268   284   Psort
                                            transmembrane     301   317   Psort
                                            transmembrane     307   324   Phd
                                            transmembrane     323   339   Psort
                                            transmembrane     355   371   Psort
                                            transmembrane     381   397   Psort
                                            transmembrane     384   401   Phd
                                            transmembrane     441   457   Psort
                                            transmembrane     443   461   Phd

PG1569    DNA polymerase I                  non-globular      1     48    SEG

PG1570    LPS-modified surface protein P27  gram negative     1     20    SignalP
                                            signal
                                            cleavable signal  1     18    Psort

PG1571    adenylate cyclase                 may be a                      Psort
                                            lipoprotein
                                            coil-coil         239   269   Coils
                                            coil-coil         299   333   Coils
                                            non-globular      338   436   SEG
                                            transmembrane     387   403   Psort
                                            non-globular      798   849   SEG

PG1572    immunoreactive 46 kDa antigen     gram negative     1     20    SignalP
          PG99                              signal
                                            uncleavable       1     20    Psort
                                            signal
                                            transmembrane     4     20    Psort

PG1573    ATP synthase subunit E            coil-coil         14    70    Coils

PG1574    conserved hypothetical protein    coil-coil         53    91    Coils

PG1577    H+-transporting ATP synthase      coil-coil         1     67    Coils
          subunit D
                                            coil-coil         164   191   Coils

PG1578    vacuolar ATPase subunit I         coil-coil         32    67    Coils
                                            transmembrane     318   334   Psort
                                            transmembrane     324   343   Phd
                                            transmembrane     369   386   Phd
                                            transmembrane     373   389   Psort
                                            transmembrane     409   426   Phd
                                            transmembrane     410   426   Psort
                                            transmembrane     440   458   Phd
                                            transmembrane     444   460   Psort
                                            transmembrane     463   481   Phd
                                            transmembrane     466   482   Psort
                                            transmembrane     516   533   Phd
                                            transmembrane     518   534   Psort
                                            transmembrane     545   561   Psort
                                            transmembrane     547   567   Phd

PG1579    probable H+-transporting ATP      cleavable signal  1     24    Psort
          synthase  subunit K
                                            transmembrane     12    29    Phd
                                            transmembrane     55    72    Phd
                                            transmembrane     61    77    Psort
                                            transmembrane     77    100   Phd
                                            transmembrane     88    104   Psort
                                            transmembrane     127   148   Phd
                                            transmembrane     136   152   Psort

PG1581    ketoisovalerate/2-oxoisoverate-   uncleavable       1     19    Psort
          ferredoxin oxidoreductase gamma   signal
          subunit
                                            transmembrane     126   142   Psort

PG1583    ketoisovalerate/2-oxoisovalerate  coil-coil         210   247   Coils
          oxidoreductase alpha subunit

PG1585    DNA primase                       coil-coil         603   673   Coils

PG1588    cytochrome c-type synthesis       cleavable signal  1     17    Psort
          protein (cytochrome c biogenesis
          protein)
                                            transmembrane     19    35    Psort
                                            transmembrane     39    55    Psort
                                            transmembrane     73    89    Psort
                                            transmembrane     96    112   Psort
                                            transmembrane     135   151   Psort
                                            transmembrane     178   194   Psort
                                            transmembrane     234   250   Psort

PG1589    hypothetical protein              transmembrane     207   224   Phd
                                            transmembrane     210   226   Psort

PG1590    conserved hypothetical protein    cleavable signal  1     38    Psort
                                            transmembrane     15    39    Phd
                                            transmembrane     43    59    Psort
                                            transmembrane     44    61    Phd
                                            transmembrane     77    94    Phd
                                            transmembrane     78    94    Psort
                                            transmembrane     120   139   Phd
                                            transmembrane     126   142   Psort
                                            transmembrane     157   173   Psort
                                            transmembrane     158   175   Phd

PG1591    cytochrome c nitrite reductase    gram negative     1     31    SignalP
          large subunit                     signal
                                            uncleavable       1     39    Psort
                                            signal
                                            transmembrane     15    31    Psort
                                            coil-coil         337   378   Coils

PG1591.1  cytochrome c nitrite reductase    transmembrane     24    40    Psort
          small subunit

PG1592    probable integral outer membrane  gram negative     1     33    SignalP
          protein P20                       signal
                                            cleavable signal  1     33    Psort

PG1593    enolase (phosphopyruvate          transmembrane     111   128   Phd
          hydratase)(2-phosphoglycerate
          dehydratase) (laminin binding
          protein)
                                            transmembrane     117   133   Psort

PG1594    hypothetical protein              non-globular      50    139   SEG
                                            transmembrane     77    93    Psort

PG1595    RNA polymerase sigma factor       cleavable signal  1     19    Psort
          (possible ECF sigma factor)
                                            coil-coil         42    87    Coils

PG1596    long-chain-fatty-acid-CoA ligase  transmembrane     71    87    Psort
          (probable polyketide synthetase)
                                            transmembrane     122   138   Psort
                                            non-globular      238   318   SEG
                                            transmembrane     263   279   Psort

PG1597    ATP-dependent DNA helicase RecQ   non-globular      32    99    SEG
                                            transmembrane     66    82    Psort

PG1597.1  hypothetical protein              transmembrane     95    111   Psort

PG1600    possible lipoprotein              gram negative     1     18    SignalP
                                            signal
                                            cleavable signal  1     18    Psort
                                            non-globular      178   278   SEG

PG1601    nucleoside-transporting protein   uncleavable       1     61    Psort
          nupG (nucleoside permease)        signal
                                            non-globular      1     130   SEG
                                            transmembrane     9     25    Psort
                                            transmembrane     48    64    Psort
                                            transmembrane     73    89    Psort
                                            transmembrane     96    112   Psort
                                            transmembrane     143   159   Psort
                                            transmembrane     165   181   Psort
                                            transmembrane     212   228   Psort
                                            transmembrane     255   271   Psort
                                            transmembrane     283   299   Psort
                                            transmembrane     307   323   Psort
                                            transmembrane     347   363   Psort
                                            transmembrane     385   401   Psort

PG1602    hemagglutinin/adhesin precursor   cleavable signal  1     24    Psort
          hagA
                                            non-globular      455   557   SEG
                                            non-globular      859   998   SEG
                                            non-globular      1311  1450  SEG

PG1603    conserved hypothetical protein    non-globular      169   225   SEG

PG1605    porphypain polyprotein; lys-X     cleavable signal  1     21    Psort
          proteinase/hemagglutinin
                                            non-globular      43    107   SEG
                                            transmembrane     1474  1491  Phd

PG1607    ISPG1 fragment (TnpA3-related)    transmembrane     57    73    Psort

PG1610    rRNA/tRNA methyltransferase       transmembrane     218   235   Phd
                                            transmembrane     220   236   Psort

PG1611    DNA recombination and repair      non-globular      195   252   SEG
          protein recN
                                            coil-coil         329   377   Coils

PG1612    conserved hypothetical protein    gram negative     1     22    SignalP
                                            signal
                                            cleavable signal  1     20    Psort
                                            transmembrane     139   155   Psort
                                            transmembrane     255   271   Psort

PG1613    DNA/pantothenate metabolism       uncleavable       1     23    Psort
          flavoprotein dfp                  signal
                                            transmembrane     10    26    Psort

PG1615    DNA polymerase III beta subunit   transmembrane     128   144   Psort

PG1616    conserved hypothetical protein    non-globular      51    185   SEG
          (probable 5-
          formyltetrahydrofolate cyclo-
          ligase)
                                            transmembrane     110   126   Psort

PG1617    carboxyl-terminal proteinase      gram negative     1     27    SignalP
                                            signal
                                            cleavable signal  1     24    Psort
                                            transmembrane     95    111   Psort

PG1621    flavodoxin A                      non-globular      1     116   SEG

PG1622    glycerate kinase                  non-globular      1     85    SEG
                                            transmembrane     257   274   Phd
                                            transmembrane     262   278   Psort
                                            transmembrane     333   350   Phd

PG1624    conserved hypothetical protein    non-globular      198   262   SEG

PG1625    hypothetical protein              cleavable signal  1     16    Psort
                                            transmembrane     67    85    Phd
                                            transmembrane     70    86    Psort

PG1626    conserved leucine-rich protein    non-globular      101   150   SEG
                                            coil-coil         151   227   Coils
                                            coil-coil         239   271   Coils
                                            coil-coil         305   362   Coils
                                            coil-coil         393   428   Coils
                                            coil-coil         746   778   Coils

PG1627    conserved hypothetical protein    cleavable signal  1     50    Psort
                                            transmembrane     5     22    Phd
                                            transmembrane     43    60    Phd
                                            transmembrane     73    90    Phd
                                            transmembrane     73    89    Psort
                                            transmembrane     134   152   Phd
                                            transmembrane     140   156   Psort

PG1633    conserved hypothetical protein    non-globular      1     52    SEG

PG1634    Na+/H+-exchanging protein         gram negative     1     41    SignalP
          (Na+/H+ antiporter)               signal
                                            transmembrane     20    36    Psort
                                            transmembrane     24    41    Phd
                                            transmembrane     71    87    Psort
                                            transmembrane     74    91    Phd
                                            transmembrane     109   127   Phd
                                            transmembrane     110   126   Psort
                                            transmembrane     139   155   Psort
                                            transmembrane     142   163   Phd
                                            transmembrane     168   192   Phd
                                            transmembrane     169   185   Psort
                                            transmembrane     192   208   Psort
                                            transmembrane     215   231   Psort
                                            transmembrane     216   240   Phd
                                            transmembrane     316   332   Psort
                                            transmembrane     317   338   Phd
                                            transmembrane     339   355   Psort
                                            transmembrane     343   364   Phd
                                            transmembrane     386   402   Psort
                                            transmembrane     387   406   Phd
                                            transmembrane     418   437   Phd
                                            transmembrane     422   438   Psort

PG1635    cysteinyl-tRNA synthetase         coil-coil         327   354   Coils
                                            non-globular      403   490   SEG

PG1636    conserved hypothetical protein    transmembrane     39    55    Psort

PG1637    possible beta 1,3-                uncleavable       1     36    Psort
          glucosyltransferase               signal
                                            non-globular      229   336   SEG
                                            transmembrane     245   261   Psort
                                            transmembrane     266   282   Psort

PG1638    conserved hypothetical protein    gram negative     1     30    SignalP
                                            signal
                                            uncleavable       1     30    Psort
                                            signal
                                            transmembrane     5     21    Psort

PG1641    HFLX-related GTP-binding protein  coil-coil         163   197   Coils

PG1642    conserved hypothetical protein    non-globular      54    125   SEG

PG1643    hypothetical protein              uncleavable       1     24    Psort
                                            signal

PG1644    hypothetical protein              gram negative     1     23    SignalP
                                            signal
                                            cleavable signal  1     25    Psort

PG1645    hypothetical protein              transmembrane     15    31    Psort

PG1646    hypothetical protein              transmembrane     155   171   Psort
                                            transmembrane     156   173   Phd
                                            transmembrane     189   209   Phd
                                            transmembrane     218   237   Phd
                                            transmembrane     273   290   Phd
                                            transmembrane     275   291   Psort

PG1647    hypothetical protein              gram negative     1     25    SignalP
                                            signal
                                            cleavable signal  1     25    Psort
                                            non-globular      26    109   SEG

PG1648    conserved hypothetical protein,   cleavable signal  1     58    Psort
          with TPR repeat

PG1649    hypothetical protein              gram negative     1     20    SignalP
                                            signal
                                            cleavable signal  1     16    Psort

PG1651    hypothetical protein              gram negative     1     20    SignalP
                                            signal
                                            cleavable signal  1     20    Psort

PG1653    conserved hypothetical protein    uncleavable       1     21    Psort
                                            signal

PG1654    possible transporter protein      uncleavable       1     19    Psort
                                            signal
                                            transmembrane     5     21    Psort
                                            transmembrane     14    34    Phd
                                            transmembrane     36    52    Psort
                                            transmembrane     42    66    Phd
                                            transmembrane     60    76    Psort
                                            transmembrane     95    115   Phd
                                            transmembrane     96    112   Psort
                                            transmembrane     125   142   Phd
                                            transmembrane     126   142   Psort
                                            transmembrane     147   164   Phd
                                            transmembrane     169   186   Phd
                                            transmembrane     170   186   Psort

PG1655    probable tonB-linked outer        transmembrane     51    67    Psort
          membrane receptor

PG1657    ribosome recycling factor         coil-coil         102   129   Coils
          (ribosome releasing factor)
                                            coil-coil         141   173   Coils

PG1660    ISPg3 C-terminal fragment         coil-coil         67    98    Coils

PG1662    ISPg1 transposase (IS1106-        transmembrane     58    74    Psort
          related transposase)
                                            non-globular      138   235   SEG
                                            coil-coil         284   313   Coils

PG1663.1  hypothetical protein              gram negative     1     19    SignalP
                                            signal
                                            cleavable signal  1     19    Psort

PG1664    hypothetical protein              cleavable signal  1     21    Psort

PG1665    ISPg1 transposase                 non-globular      36    133   SEG
          fragment(IS1106-related
          transposase)

PG1667    RNA polymerase alpha subunit      uncleavable       1     18    Psort
          (DNA-directed RNA polymerase      signal
          alpha subunit) (transcriptase
          alpha chain)
                                            non-globular      239   330   SEG

PG1673    preprotein translocase SecY       transmembrane     22    39    Phd
                                            transmembrane     22    38    Psort
                                            transmembrane     73    92    Phd
                                            transmembrane     83    99    Psort
                                            transmembrane     119   136   Phd
                                            transmembrane     120   136   Psort
                                            transmembrane     150   167   Phd
                                            transmembrane     155   171   Psort
                                            transmembrane     183   200   Phd
                                            transmembrane     186   202   Psort
                                            transmembrane     213   235   Phd
                                            transmembrane     220   236   Psort
                                            transmembrane     270   291   Phd
                                            transmembrane     275   291   Psort
                                            transmembrane     311   328   Phd
                                            transmembrane     314   330   Psort
                                            transmembrane     370   386   Psort
                                            transmembrane     372   391   Phd
                                            transmembrane     396   414   Phd
                                            transmembrane     396   412   Psort

PG1674    30S ribosomal protein S5          non-globular      1     172   SEG

PG1675    50S ribosomal protein L18         non-globular      41    114   SEG

PG1678    30S ribosomal protein S14         coil-coil         1     39    Coils

PG1681    50S ribosomal protein L14         non-globular      1     85    SEG

PG1683    50S ribosomal protein L16         non-globular      40    144   SEG

PG1685    50S ribosomal protein L22         coil-coil         39    67    Coils

PG1689    50S ribosomal protein L4          non-globular      50    209   SEG

PG1690    50S ribosomal protein L3          non-globular      33    158   SEG

PG1692    elongation factor G protein       transmembrane     100   116   Psort

PG1693    30S ribosomal protein S7          coil-coil         119   158   Coils

PG1694.1  hypothetical protein              cleavable signal  1     36    Psort

PG1695    hypothetical protein              transmembrane     35    52    Phd
                                            transmembrane     40    56    Psort
                                            transmembrane     57    74    Phd
                                            transmembrane     193   210   Phd
                                            transmembrane     198   214   Psort
                                            coil-coil         225   252   Coils
                                            transmembrane     301   318   Phd
                                            transmembrane     304   320   Psort
                                            transmembrane     336   352   Psort
                                            transmembrane     337   356   Phd
                                            transmembrane     362   378   Psort
                                            transmembrane     364   381   Phd
                                            transmembrane     395   419   Phd
                                            transmembrane     403   419   Psort

PG1696    3-phosphoshikimate-1-             transmembrane     143   159   Psort
          carboxyvinyltransferase
                                            transmembrane     304   320   Psort

PG1697    hypothetical protein              gram negative     1     19    SignalP
                                            signal
                                            cleavable signal  1     31    Psort

PG1698    ABC transporter; metal transport  uncleavable       1     15    Psort
                                            signal
                                            non-globular      1     268   SEG
                                            transmembrane     17    33    Psort
                                            transmembrane     63    79    Psort
                                            transmembrane     90    106   Psort
                                            transmembrane     132   148   Psort
                                            transmembrane     181   197   Psort
                                            transmembrane     218   234   Psort
                                            transmembrane     242   258   Psort

PG1699    hypothetical protein              uncleavable       1     23    Psort
                                            signal
                                            transmembrane     6     22    Psort
                                            non-globular      189   322   SEG
                                            coil-coil         442   477   Coils
                                            non-globular      541   609   SEG
                                            coil-coil         1053  1160  Coils

PG1700    possible lipoprotein              uncleavable       1     27    Psort
                                            signal
                                            transmembrane     5     21    Psort

PG1700.1  hypothetical protein              uncleavable       1     27    Psort
                                            signal

PG1701    malate dehydrogenase              cleavable signal  1     25    Psort
                                            transmembrane     120   136   Psort

PG1703    possible permease                 uncleavable       1     33    Psort
                                            signal
                                            transmembrane     17    33    Psort
                                            transmembrane     20    44    Phd
                                            transmembrane     36    52    Psort
                                            transmembrane     68    90    Phd
                                            transmembrane     71    87    Psort
                                            transmembrane     162   184   Phd
                                            transmembrane     169   185   Psort
                                            transmembrane     224   240   Psort
                                            transmembrane     226   244   Phd
                                            transmembrane     242   258   Psort
                                            transmembrane     256   273   Phd
                                            transmembrane     261   277   Psort
                                            transmembrane     284   301   Phd
                                            transmembrane     285   301   Psort
                                            transmembrane     321   345   Phd
                                            transmembrane     332   348   Psort

PG1705    dedA homolog                      cleavable signal  1     21    Psort
                                            transmembrane     12    29    Phd
                                            transmembrane     46    70    Phd
                                            transmembrane     51    67    Psort
                                            transmembrane     75    92    Phd
                                            transmembrane     119   136   Phd
                                            transmembrane     141   161   Phd
                                            transmembrane     187   204   Phd
                                            transmembrane     187   203   Psort

PG1706    conserved hypothetical protein    may be a                      Psort
          (possible YitT family)            lipoprotein
                                            transmembrane     20    38    Phd
                                            transmembrane     47    71    Phd
                                            transmembrane     64    80    Psort
                                            transmembrane     76    100   Phd
                                            transmembrane     83    99    Psort
                                            transmembrane     125   145   Phd
                                            transmembrane     127   143   Psort
                                            transmembrane     150   167   Phd
                                            transmembrane     172   189   Phd
                                            transmembrane     172   188   Psort
                                            transmembrane     200   217   Phd
                                            transmembrane     200   216   Psort

PG1711    conserved hypothetical protein    cleavable signal  1     40    Psort
                                            transmembrane     4     21    Phd
                                            transmembrane     40    57    Phd
                                            transmembrane     43    59    Psort
                                            transmembrane     80    97    Phd
                                            transmembrane     82    98    Psort
                                            transmembrane     111   127   Psort
                                            transmembrane     146   162   Psort
                                            transmembrane     149   167   Phd
                                            transmembrane     187   204   Phd
                                            transmembrane     187   203   Psort
                                            transmembrane     227   243   Psort
                                            transmembrane     228   246   Phd
                                            transmembrane     249   265   Psort
                                            transmembrane     251   268   Phd
                                            transmembrane     310   327   Phd
                                            transmembrane     311   327   Psort
                                            transmembrane     402   418   Psort
                                            transmembrane     405   422   Phd
                                            transmembrane     460   480   Phd
                                            transmembrane     466   482   Psort
                                            transmembrane     485   503   Phd
                                            transmembrane     487   503   Psort
                                            coil-coil         543   589   Coils
                                            coil-coil         663   702   Coils

PG1712    hypothetical protein              non-globular      77    208   SEG

PG1714    conserved hypothetical protein    coil-coil         39    74    Coils
          (possible SuA5 family protein)

PG1715    probable glycosyltransferase      uncleavable       1     23    Psort
                                            signal
                                            non-globular      1     135   SEG
                                            transmembrane     53    69    Psort
                                            transmembrane     89    105   Psort
                                            transmembrane     114   130   Psort
                                            transmembrane     215   231   Psort
                                            transmembrane     291   307   Psort

PG1716    possible chloride channel         transmembrane     28    44    Psort
          protein
                                            transmembrane     67    83    Psort
                                            non-globular      105   230   SEG
                                            transmembrane     117   133   Psort
                                            transmembrane     145   161   Psort
                                            transmembrane     187   203   Psort

PG1717    conserved hypothetical protein    non-globular      1     142   SEG
          (possible transport)
                                            transmembrane     40    56    Psort
                                            transmembrane     59    75    Psort

PG1718    conserved hypothetical protein    gram negative     1     27    SignalP
          (possible O-linked-GlcNAc         signal
          transferase homolog)
                                            cleavable signal  1     32    Psort

PG1719    hypothetical protein              transmembrane     46    62    Psort
                                            transmembrane     61    83    Phd
                                            transmembrane     69    85    Psort

PG1720    hypothetical protein              transmembrane     274   290   Psort

PG1721    hemagglutinin hagB                non-globular      194   373   SEG

PG1722.1  hypothetical protein              gram negative     1     26    SignalP
                                            signal
                                            cleavable signal  1     26    Psort

PG1723    hypothetical protein              gram negative     1     66    SignalP
                                            signal
                                            transmembrane     48    64    Psort
                                            transmembrane     49    66    Phd
                                            transmembrane     141   158   Phd
                                            transmembrane     145   161   Psort
                                            transmembrane     163   182   Phd

PG1724    hemagglutinin hagC                non-globular      171   350   SEG

PG1726    hypothetical protein              uncleavable       1     41    Psort
                                            signal
                                            transmembrane     4     20    Psort

PG1727    hypothetical protein              gram negative     1     28    SignalP
                                            signal
                                            cleavable signal  1     30    Psort

PG1728.1  hypothetical protein              transmembrane     102   118   Psort

PG1734    possible CRISPR-associated        coil-coil         323   350   Coils
          protein, TM1793 family

PG1735    possible CRISPR-associated        non-globular      39    85    SEG
          protein, TM1793 family
                                            coil-coil         86    122   Coils
                                            coil-coil         277   323   Coils
                                            coil-coil         382   420   Coils

PG1737    hypothetical protein              uncleavable       1     49    Psort
                                            signal
                                            transmembrane     2     18    Psort
                                            coil-coil         16    44    Coils

PG1738    hypothetical protein              transmembrane     462   479   Phd
                                            transmembrane     463   479   Psort
                                            transmembrane     499   515   Psort
                                            transmembrane     501   518   Phd

PG1739    glucose inhibited division        non-globular      126   219   SEG
          protein A(oxidoreductase)
                                            coil-coil         545   572   Coils

PG1740    excinuclease ABC subunit C        non-globular      456   528   SEG
                                            coil-coil         541   579   Coils

PG1745    conserved hypothetical protein    transmembrane     128   144   Psort

PG1746    signal peptidase I (leader        uncleavable       1     23    Psort
          peptidase)                        signal
                                            transmembrane     11    27    Psort
                                            transmembrane     15    32    Phd

PG1747    possible signal peptidase I       uncleavable       1     32    Psort
                                            signal
                                            transmembrane     19    43    Phd
                                            transmembrane     26    42    Psort
                                            transmembrane     67    91    Phd
                                            transmembrane     72    88    Psort

PG1748    dihydropicolinate reductase       non-globular      129   206   SEG

PG1750    conserved membrane protein        uncleavable       1     48    Psort
                                            signal
                                            transmembrane     13    30    Phd
                                            transmembrane     15    31    Psort
                                            transmembrane     40    57    Phd
                                            transmembrane     41    57    Psort
                                            transmembrane     98    115   Phd
                                            transmembrane     98    114   Psort
                                            transmembrane     128   144   Psort
                                            transmembrane     129   146   Phd
                                            transmembrane     157   173   Psort
                                            transmembrane     160   177   Phd
                                            transmembrane     187   204   Phd
                                            transmembrane     220   237   Phd
                                            transmembrane     221   237   Psort
                                            transmembrane     249   267   Phd
                                            transmembrane     250   266   Psort
                                            transmembrane     283   300   Phd
                                            transmembrane     305   327   Phd
                                            transmembrane     314   330   Psort

PG1751    hypothetical protein              cleavable signal  1     30    Psort
                                            transmembrane     17    35    Phd
                                            transmembrane     89    105   Psort

PG1752    tonB-linked outer membrane        gram negative     1     22    SignalP
          receptor P90                      signal
                                            cleavable signal  1     22    Psort

PG1753    hypothetical protein              transmembrane     93    110   Phd
                                            transmembrane     94    110   Psort
                                            transmembrane     137   154   Phd
                                            transmembrane     139   155   Psort

PG1755    ISPg1 transposase fragment        non-globular      36    133   SEG
          (IS1106-related transposase)
                                            coil-coil         182   211   Coils

PG1757    conserved hypothetical protein    non-globular      34    87    SEG

PG1760    conserved hypothetical protein    transmembrane     397   413   Psort

PG1761    hypothetical protein              uncleavable       1     24    Psort
                                            signal

PG1765    conserved hypothetical protein    cleavable signal  1     58    Psort
                                            transmembrane     22    40    Phd
                                            transmembrane     69    87    Phd
                                            transmembrane     69    85    Psort
                                            transmembrane     108   125   Phd
                                            transmembrane     110   126   Psort
                                            transmembrane     156   173   Phd
                                            transmembrane     157   173   Psort
                                            transmembrane     198   215   Phd
                                            transmembrane     199   215   Psort
                                            transmembrane     301   317   Psort

PG1766    conserved hypothetical protein    transmembrane     27    43    Psort
                                            transmembrane     30    47    Phd
                                            transmembrane     124   141   Phd
                                            transmembrane     124   140   Psort
                                            transmembrane     149   170   Phd
                                            transmembrane     151   167   Psort
                                            transmembrane     175   192   Phd
                                            transmembrane     175   191   Psort
                                            transmembrane     197   213   Psort
                                            transmembrane     216   235   Phd
                                            transmembrane     222   238   Psort
                                            transmembrane     246   263   Phd
                                            transmembrane     247   263   Psort
                                            transmembrane     371   387   Psort
                                            transmembrane     374   398   Phd
                                            transmembrane     392   408   Psort
                                            transmembrane     403   420   Phd
                                            transmembrane     435   452   Phd
                                            transmembrane     435   451   Psort
                                            transmembrane     470   486   Psort
                                            transmembrane     473   490   Phd
                                            transmembrane     532   549   Phd
                                            transmembrane     532   548   Psort
                                            transmembrane     554   571   Phd
                                            transmembrane     555   571   Psort
                                            transmembrane     818   835   Phd
                                            transmembrane     818   834   Psort

PG1768    arginine-specific cysteine        cleavable signal  1     23    Psort
          proteinase; gingipain R1
                                            non-globular      582   732   SEG
                                            non-globular      823   1006  SEG

PG1770    hypothetical protein              transmembrane     43    60    Phd
                                            transmembrane     44    60    Psort
                                            transmembrane     73    89    Psort
                                            transmembrane     77    94    Phd
                                            transmembrane     122   139   Phd
                                            transmembrane     124   140   Psort
                                            transmembrane     150   167   Phd
                                            transmembrane     151   167   Psort

PG1772    conserved hypothetical protein    gram negative     1     23    SignalP
                                            signal
                                            cleavable signal  1     23    Psort
                                            coil-coil         733   775   Coils

PG1775    primosomal protein N'             non-globular      707   837   SEG
          (replication factor Y)

PG1776    glutamate synthase beta subunit   non-globular      335   462   SEG
          (glutamate synthase small
          subunit)

PG1777    hydrogenase gamma subunit         transmembrane     101   117   Psort
                                            transmembrane     182   198   Psort

PG1779    ion transporter                   transmembrane     31    48    Phd
                                            transmembrane     31    47    Psort
                                            transmembrane     66    83    Phd
                                            transmembrane     69    85    Psort
                                            transmembrane     95    113   Phd
                                            transmembrane     109   125   Psort
                                            transmembrane     118   137   Phd
                                            transmembrane     152   173   Phd
                                            transmembrane     157   173   Psort
                                            transmembrane     190   207   Phd
                                            transmembrane     216   235   Phd
                                            transmembrane     221   237   Psort

PG1782    hypothetical protein              gram negative     1     20    SignalP
                                            signal
                                            cleavable signal  1     18    Psort

PG1783    hypothetical protein              transmembrane     126   142   Psort

PG1785    conserved hypothetical protein    coil-coil         11    183   Coils

PG1786    conserved hypothetical protein    transmembrane     26    42    Psort
          (potential cell cycle protein)

PG1786.1  hypothetical protein              uncleavable       1     30    Psort
                                            signal

PG1787    helicase-related protein          non-globular      596   704   SEG

PG1789    hypothetical protein              transmembrane     36    52    Psort
                                            transmembrane     37    56    Phd
                                            transmembrane     66    89    Phd
                                            transmembrane     72    88    Psort

PG1790    hypothetical protein              gram negative     1     25    SignalP
                                            signal
                                            cleavable signal  1     22    Psort
                                            coil-coil         34    91    Coils

PG1793    outer membrane protein            may be a                      Psort
          (immunogenic 23 kDa lipoprotein   lipoprotein
          PG3)
                                            gram negative     1     26    SignalP
                                            signal
                                            transmembrane     46    63    Phd
                                            transmembrane     52    68    Psort

PG1794    dihydroorotate dehydrogenase      transmembrane     149   165   Psort
                                            transmembrane     151   168   Phd
                                            transmembrane     225   242   Phd
                                            transmembrane     228   244   Psort
                                            transmembrane     252   269   Phd

PG1797    ISPg5-related orf-1               coil-coil         79    110   Coils

PG1798    ISPg1 transposase fragment        non-globular      36    133   SEG
          (IS1106-related transposase)
                                            coil-coil         182   211   Coils

PG1799    thymidylate synthase              transmembrane     177   194   Phd

PG1801    histidyl-tRNA synthetase          non-globular      147   248   SEG
                                            coil-coil         249   279   Coils

PG1805    lipoprotein                       gram negative     1     26    SignalP
                                            signal
                                            cleavable signal  1     21    Psort

PG1808    3-oxoacyl-(acyl-carrier-protein)  coil-coil         55    84    Coils
          reductase

PG1809    conserved hypothetical protein    transmembrane     45    62    Phd
                                            transmembrane     47    63    Psort
                                            transmembrane     68    85    Phd
                                            transmembrane     72    88    Psort
                                            transmembrane     108   124   Psort
                                            transmembrane     110   127   Phd
                                            transmembrane     138   156   Phd
                                            transmembrane     139   155   Psort
                                            transmembrane     262   286   Phd
                                            transmembrane     277   293   Psort

PG1811    possible ATP-dependent nuclease   coil-coil         73    108   Coils
                                            non-globular      574   716   SEG

PG1814    hypothetical protein              non-globular      1     182   SEG

PG1815    possible peptidylarginine         gram negative     1     26    SignalP
          deiminase                         signal
                                            cleavable signal  1     28    Psort
                                            transmembrane     68    84    Psort

PG1818    adenosylmethionine-8-amino-7-     non-globular      316   390   SEG
          oxononanoate  aminotransferase

PG1820    conserved hypothetical protein    non-globular      1     93    SEG
          (possible transporter membrane
          protein)
                                            transmembrane     25    41    Psort
                                            transmembrane     51    67    Psort
                                            transmembrane     77    93    Psort
                                            transmembrane     106   122   Psort
                                            transmembrane     153   169   Psort
                                            transmembrane     242   258   Psort
                                            transmembrane     294   310   Psort
                                            transmembrane     352   368   Psort
                                            transmembrane     381   397   Psort
                                            transmembrane     421   437   Psort
                                            transmembrane     461   477   Psort
                                            transmembrane     488   504   Psort

PG1821    conserved hypothetical protein    gram negative     1     26    SignalP
                                            signal
                                            cleavable signal  1     26    Psort

PG1822    tryptophanyl-tRNA synthetase      non-globular      273   327   SEG

PG1823    conserved hypothetical protein    non-globular      93    139   SEG

PG1826    peptide methionine sulfoxide      gram negative     1     27    SignalP
          reductase                         signal
                                            cleavable signal  1     19    Psort

PG1827    conserved hypothetical protein    cleavable signal  1     21    Psort
                                            non-globular      203   287   SEG
                                            transmembrane     277   293   Psort

PG1827.1  hypothetical protein              cleavable signal  1     44    Psort

PG1828    cation efflux system protein      transmembrane     17    33    Psort
                                            transmembrane     52    68    Psort
                                            transmembrane     86    102   Psort
                                            transmembrane     120   136   Psort
                                            transmembrane     168   184   Psort
                                            transmembrane     188   204   Psort

PG1830    conserved hypothetical protein    gram negative     1     25    SignalP
                                            signal
                                            cleavable signal  1     25    Psort
                                            transmembrane     150   166   Psort

PG1831    conserved hypothetical protein    transmembrane     36    52    Psort
                                            transmembrane     39    56    Phd
                                            non-globular      97    177   SEG
                                            coil-coil         201   231   Coils
                                            non-globular      802   896   SEG
                                            non-globular      1355  1440  SEG

PG1832    conserved hypothetical protein    may be a                      Psort
                                            lipoprotein

PG1833    conserved hypothetical protein    uncleavable       1     32    Psort
                                            signal
                                            transmembrane     11    27    Psort
                                            transmembrane     15    32    Phd
                                            non-globular      1019  1088  SEG

PG1835    DEAD box-related helicase (ATP-   coil-coil         250   284   Coils
          dependent RNA helicase)
                                            non-globular      384   427   SEG

PG1836    immunoreactive antigen            gram negative     1     29    SignalP
                                            signal
                                            cleavable signal  1     29    Psort

PG1837    conserved hypothetical protein    gram negative     1     28    SignalP
                                            signal
                                            uncleavable       1     28    Psort
                                            signal
                                            transmembrane     12    28    Psort
                                            coil-coil         45    80    Coils

PG1838    LPS-modified surface protein P59  gram negative     1     25    SignalP
                                            signal
                                            cleavable signal  1     25    Psort

PG1839    possible lipoprotein              gram negative     1     20    SignalP
                                            signal
                                            cleavable signal  1     17    Psort

PG1840    probable integral outer membrane  gram negative     1     22    SignalP
          protein P22                       signal
                                            cleavable signal  1     21    Psort
                                            transmembrane     115   132   Phd
                                            transmembrane     177   195   Phd

PG1843    thiamin biosynthesis protein      non-globular      144   259   SEG

PG1844    phosphomethylpyrimidine           non-globular      105   181   SEG
          kinase/thiamine-phosphate
          pyrophosphorylase
                                            non-globular      586   647   SEG

PG1848    hypothetical protein              transmembrane     27    44    Phd
                                            transmembrane     116   132   Psort
                                            transmembrane     118   135   Phd

PG1849    hypothetical protein              transmembrane     25    41    Psort

PG1850    30S ribosomal protein S16         coil-coil         96    176   Coils

PG1851.1  hypothetical protein              transmembrane     14    30    Psort

PG1852    oxidoreductase, Gfo/Idh/MocA      uncleavable       1     51    Psort
          family                            signal

PG1854    L-asparaginase I                  uncleavable       1     22    Psort
                                            signal

PG1855    ISPg2 fragment                    transmembrane     25    41    Psort

PG1858    transcription regulator           transmembrane     30    47    Phd
                                            transmembrane     93    110   Phd
                                            transmembrane     95    111   Psort
                                            transmembrane     150   166   Psort

PG1859    conserved hypothetical protein    non-globular      139   224   SEG

PG1862    ISPg5-related orf-1               coil-coil         79    110   Coils

PG1862.1  hypothetical protein              uncleavable       1     21    Psort
                                            signal
                                            transmembrane     67    83    Psort

PG1863    hypothetical protein              gram negative     1     24    SignalP
                                            signal
                                            uncleavable       1     24    Psort
                                            signal
                                            transmembrane     6     22    Psort

PG1864    60 kDa antigen                    gram negative     1     21    SignalP
                                            signal
                                            cleavable signal  1     19    Psort
                                            non-globular      395   490   SEG

PG1865    major fimbrillin A                may be a                      Psort
                                            lipoprotein
                                            gram negative     1     21    SignalP
                                            signal

PG1866    hypothetical protein              may be a                      Psort
                                            lipoprotein

PG1867    hypothetical protein              gram negative     1     28    SignalP
                                            signal
                                            cleavable signal  1     30    Psort

PG1868    hypothetical protein              may be a                      Psort
                                            lipoprotein
                                            non-globular      352   456   SEG

PG1869    hypothetical protein              uncleavable       1     24    Psort
                                            signal
                                            transmembrane     4     20    Psort
                                            non-globular      334   411   SEG

PG1871    hypothetical protein              coil-coil         50    77    Coils

PG1873    GTP-binding protein               non-globular      162   299   SEG

PG1875    conserved hypothetical protein    cleavable signal  1     19    Psort
                                            transmembrane     13    30    Phd
                                            transmembrane     83    99    Psort
                                            transmembrane     84    101   Phd
                                            transmembrane     129   145   Psort
                                            transmembrane     131   148   Phd
                                            transmembrane     155   172   Phd
                                            transmembrane     158   174   Psort
                                            transmembrane     189   205   Psort
                                            transmembrane     194   215   Phd
                                            transmembrane     230   246   Psort
                                            transmembrane     232   250   Phd
                                            transmembrane     255   271   Psort
                                            transmembrane     270   288   Phd
                                            transmembrane     274   290   Psort
                                            transmembrane     311   327   Psort
                                            transmembrane     320   344   Phd
                                            transmembrane     331   347   Psort
                                            transmembrane     358   376   Phd
                                            transmembrane     362   378   Psort
                                            transmembrane     568   584   Psort
                                            transmembrane     593   610   Phd
                                            transmembrane     595   611   Psort
                                            transmembrane     629   646   Phd
                                            transmembrane     631   647   Psort
                                            transmembrane     653   670   Phd
                                            transmembrane     657   673   Psort

PG1878    xanthine                          transmembrane     58    75    Phd
          phosphoribosyltransferase
                                            transmembrane     62    78    Psort

PG1879    xanthine/uracil permease family   non-globular      1     445   SEG
          protein
                                            transmembrane     35    51    Psort
                                            transmembrane     61    77    Psort
                                            transmembrane     114   130   Psort
                                            transmembrane     146   162   Psort
                                            transmembrane     179   195   Psort
                                            transmembrane     207   223   Psort
                                            transmembrane     248   264   Psort
                                            transmembrane     339   355   Psort
                                            transmembrane     369   385   Psort
                                            transmembrane     393   409   Psort

PG1880    conserved hypothetical protein    gram negative     1     38    SignalP
                                            signal
                                            cleavable signal  1     38    Psort
                                            transmembrane     21    38    Phd
                                            non-globular      160   240   SEG

PG1881    conserved hypothetical protein,   uncleavable       1     26    Psort
          with LysM repeats                 signal
                                            transmembrane     10    26    Psort

PG1883    lipoprotein                       gram negative     1     22    SignalP
                                            signal
                                            cleavable signal  1     22    Psort
                                            coil-coil         191   228   Coils

PG1885    conserved hypothetical protein    may be a                      Psort
                                            lipoprotein
                                            gram negative     1     19    SignalP
                                            signal

PG1886    conserved hypothetical protein    transmembrane     73    89    Psort

PG1887    protoporphryninogen oxidase       cleavable signal  1     23    Psort
          (PPO)

PG1888    hypothetical protein              transmembrane     99    115   Psort

PG1889    lipid A disaccharide synthase     transmembrane     54    70    Psort

PG1891    conserved hypothetical protein    gram negative     1     23    SignalP
                                            signal
                                            cleavable signal  1     23    Psort

PG1892    glycyl-tRNA synthetase (glycine-  transmembrane     401   417   Psort
          -tRNA ligase)

PG1893    possible outer membrane-          gram negative     1     20    SignalP
          associated protein P51            signal
                                            cleavable signal  1     22    Psort
                                            non-globular      289   337   SEG

PG1894    hypothetical protein              uncleavable       1     14    Psort
                                            signal

PG1895    ISPg1 transposase fragment        non-globular      37    131   SEG
          (IS1106-related transposase)

PG1895.1  hypothetical protein              transmembrane     34    50    Psort

PG1897    probable glucose/galactose        cleavable signal  1     22    Psort
          transporter
                                            transmembrane     14    32    Phd
                                            transmembrane     50    67    Phd
                                            transmembrane     80    96    Psort
                                            transmembrane     81    98    Phd
                                            transmembrane     103   120   Phd
                                            transmembrane     104   120   Psort
                                            transmembrane     148   165   Phd
                                            transmembrane     148   164   Psort
                                            transmembrane     178   197   Phd
                                            transmembrane     180   196   Psort
                                            transmembrane     222   239   Phd
                                            transmembrane     224   240   Psort
                                            transmembrane     261   277   Psort
                                            transmembrane     265   286   Phd
                                            transmembrane     295   311   Psort
                                            transmembrane     296   316   Phd
                                            transmembrane     333   352   Phd
                                            transmembrane     334   350   Psort
                                            transmembrane     371   387   Psort
                                            transmembrane     375   392   Phd
                                            transmembrane     397   414   Phd
                                            transmembrane     402   418   Psort

PG1898    dehydrogenase protein (probable   cleavable signal  1     14    Psort
          glycerate dehydrogenase)
                                            transmembrane     98    114   Psort

PG1899    hypothetical protein              gram negative     1     28    SignalP
                                            signal
                                            cleavable signal  1     28    Psort

PG1901    outer membrane protein            gram negative     1     19    SignalP
                                            signal
                                            cleavable signal  1     16    Psort

PG1902    hypothetical protein              gram negative     1     20    SignalP
                                            signal
                                            cleavable signal  1     20    Psort

PG1903    probable thioredoxin              gram negative     1     19    SignalP
                                            signal
                                            cleavable signal  1     19    Psort

PG1905    ISPg2 (PGIS2) transposase         transmembrane     22    38    Psort
                                            coil-coil         43    70    Coils
                                            non-globular      331   376   SEG

PG1906    Na+-translocating NADH-quinone    gram negative     1     26    SignalP
          reductase (possible               signal
          phenolhydroxylase component)
                                            cleavable signal  1     26    Psort

PG1907    Na+-translocating NADH-quinone    cleavable signal  1     45    Psort
          reductase subunit Nqr5 (sodium-
          translocating NADH
          dehydrogenase)
                                            transmembrane     15    32    Phd
                                            transmembrane     38    59    Phd
                                            transmembrane     52    68    Psort
                                            transmembrane     80    98    Phd
                                            transmembrane     94    110   Psort
                                            transmembrane     112   129   Phd
                                            transmembrane     126   142   Psort
                                            transmembrane     148   165   Phd
                                            transmembrane     164   180   Psort
                                            transmembrane     181   198   Phd
                                            transmembrane     195   211   Psort

PG1908    Na+-translocating NADH-quinone    cleavable signal  1     60    Psort
          reductase subunit Nqr4 (sodium-
          translocating NADH
          dehydrogenase)
                                            transmembrane     25    49    Phd
                                            transmembrane     62    78    Psort
                                            transmembrane     71    89    Phd
                                            transmembrane     85    101   Psort
                                            transmembrane     102   119   Phd
                                            transmembrane     115   131   Psort
                                            transmembrane     140   159   Phd
                                            transmembrane     159   175   Psort
                                            transmembrane     181   198   Phd
                                            transmembrane     194   210   Psort

PG1909    Na+-translocating NADH-quinone    uncleavable       1     16    Psort
          reductase gamma subunit (sodium-  signal
          translocating NADH dehydrogenase
          subunit nqr3)
                                            transmembrane     2     18    Psort
                                            transmembrane     34    50    Psort

PG1910    NADH dehydrogenase (ubiquinone)   transmembrane     57    73    Psort
                                            transmembrane     60    78    Phd
                                            transmembrane     86    102   Psort
                                            transmembrane     89    112   Phd
                                            transmembrane     105   121   Psort
                                            transmembrane     139   158   Phd
                                            transmembrane     146   162   Psort
                                            transmembrane     174   191   Phd
                                            transmembrane     176   192   Psort
                                            transmembrane     260   277   Phd
                                            transmembrane     262   278   Psort
                                            transmembrane     282   306   Phd
                                            transmembrane     282   298   Psort
                                            transmembrane     311   328   Phd
                                            transmembrane     311   327   Psort
                                            transmembrane     341   357   Psort
                                            transmembrane     343   360   Phd
                                            transmembrane     365   383   Phd
                                            transmembrane     368   384   Psort

PG1911.1  hypothetical protein              transmembrane     47    63    Psort

PG1912    conserved hypothetical protein    uncleavable       1     17    Psort
          (possible tonB domain)            signal
                                            transmembrane     5     21    Psort
                                            transmembrane     6     23    Phd
                                            transmembrane     41    58    Phd
                                            transmembrane     41    57    Psort
                                            transmembrane     101   121   Phd
                                            transmembrane     102   118   Psort
                                            transmembrane     187   203   Psort
                                            transmembrane     191   208   Phd
                                            transmembrane     282   299   Phd
                                            transmembrane     282   298   Psort
                                            non-globular      303   345   SEG

PG1914    1,4-dihydroxy-2-naphthoate        transmembrane     20    37    Phd
          octaprenyltransferase (DHNA-
          octaprenyltransferase)
                                            transmembrane     22    38    Psort
                                            transmembrane     42    59    Phd
                                            transmembrane     47    63    Psort
                                            transmembrane     98    122   Phd
                                            transmembrane     101   117   Psort
                                            transmembrane     122   138   Psort
                                            transmembrane     147   164   Phd
                                            transmembrane     148   164   Psort
                                            transmembrane     178   195   Phd
                                            transmembrane     228   252   Phd
                                            transmembrane     238   254   Psort
                                            transmembrane     275   292   Phd
                                            transmembrane     277   293   Psort

PG1915    diaminopimelate decarboxylase     non-globular      48    132   SEG

PG1916    aspartokinase-I                   coil-coil         57    98    Coils

PG1918    conserved hypothetical protein    gram negative     1     21    SignalP
          (possible membrane protein        signal
          related to metalloendopeptidases
                                            transmembrane     27    43    Psort
                                            non-globular      257   337   SEG

PG1919    ISPg1 transposase fragment        non-globular      36    133   SEG
          (IS1106-related transposase)
                                            coil-coil         182   211   Coils

PG1920    ISPg4 transposase                 uncleavable       1     51    Psort
                                            signal
                                            transmembrane     283   300   Phd
                                            transmembrane     321   337   Psort
                                            transmembrane     324   341   Phd

PG1921    conserved hypothetical protein    may be a                      Psort
                                            lipoprotein
                                            gram negative     1     26    SignalP
                                            signal

PG1922    hemagglutinin/gingipain-related   gram negative     1     28    SignalP
          protein                           signal
                                            cleavable signal  1     28    Psort
                                            non-globular      35    106   SEG

PG1923    ABC transporter (ATP-binding      non-globular      381   469   SEG
          protein)
                                            coil-coil         563   645   Coils

PG1924    TPR-repeat-containing protein     gram negative     1     21    SignalP
                                            signal
                                            cleavable signal  1     21    Psort
                                            non-globular      327   459   SEG

PG1925    polypeptide deformylase           transmembrane     44    60    Psort
          (formylmethionine deformylase)

PG1927    conserved hypothetical protein    cleavable signal  1     22    Psort
                                            coil-coil         27    60    Coils
                                            coil-coil         219   256   Coils
                                            non-globular      1002  1069  SEG
                                            non-globular      1326  1421  SEG
                                            transmembrane     1367  1383  Psort
                                            coil-coil         1426  1462  Coils
                                            non-globular      1754  1825  SEG

PG1928    possible oxidoreductase           cleavable signal  1     43    Psort
          (ketopantoate reductase)
                                            non-globular      1     68    SEG

PG1929    ABC transporter protein,NBD-NBD   coil-coil         241   298   Coils
          fusion protein

PG1932    conserved hypothetical protein    uncleavable       1     13    Psort
                                            signal
                                            transmembrane     2     18    Psort
                                            transmembrane     3     20    Phd
                                            transmembrane     32    53    Phd
                                            transmembrane     34    50    Psort
                                            transmembrane     60    78    Phd
                                            transmembrane     60    76    Psort

PG1933    hypothetical protein              uncleavable       1     17    Psort
                                            signal
                                            transmembrane     2     18    Psort
                                            transmembrane     4     21    Phd
                                            transmembrane     28    44    Psort
                                            transmembrane     32    56    Phd
                                            transmembrane     61    78    Phd
                                            transmembrane     63    79    Psort

PG1934    excinuclease ABC subunit A        coil-coil         462   495   Coils

PG1935    hypothetical protein              non-globular      177   317   SEG
                                            transmembrane     330   346   Psort

PG1938    conserved hypothetical protein    non-globular      1     120   SEG
                                            transmembrane     82    98    Psort
                                            transmembrane     213   229   Psort
                                            transmembrane     342   358   Psort

PG1939    1-deoxyxylulose-5-phosphate       non-globular      122   266   SEG
          synthase (DXP synthase)

PG1941    potassium uptake system protein   transmembrane     17    33    Psort
                                            transmembrane     44    60    Psort
                                            transmembrane     78    94    Psort
                                            transmembrane     143   159   Psort
                                            transmembrane     190   206   Psort
                                            transmembrane     281   297   Psort
                                            transmembrane     336   352   Psort
                                            transmembrane     401   417   Psort
                                            transmembrane     464   480   Psort

PG1941.1  hypothetical protein              uncleavable       1     33    Psort
                                            signal
                                            transmembrane     10    26    Psort

PG1943    lipid A biosynthesis              uncleavable       1     23    Psort
          acyltransferase                   signal
                                            transmembrane     11    27    Psort

PG1944    glycosyltranferase                transmembrane     246   262   Psort

PG1945    hypothetical protein              transmembrane     22    38    Psort
                                            transmembrane     48    64    Psort
                                            non-globular      81    185   SEG
                                            transmembrane     105   121   Psort
                                            transmembrane     136   152   Psort
                                            transmembrane     154   170   Psort

PG1947    conserved hypothetical protein    uncleavable       1     14    Psort
                                            signal

PG1948    hypothetical protein              gram negative     1     23    SignalP
                                            signal
                                            cleavable signal  1     23    Psort
                                            non-globular      179   261   SEG
                                            non-globular      395   504   SEG

PG1949    hypothetical protein              gram negative     1     29    SignalP
                                            signal
                                            cleavable signal  1     25    Psort
                                            non-globular      84    123   SEG

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