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Secondary Structure Features for null

Structural features are tabluated below. If a gene has a predicted feature, it appears in the table with its definition, feature type, the start and stop of the feature relative to the first amino acid and the method used to predict the feature. When the PSORT method is used, a signal peptide with a good cleavage site is noted as cleavable and a signal peptide with a bad cleavage site is noted as uncleavable.



Gene ID   Definition                       Structural Feature Start  Stop  Method
--------- -------------------------------- ------------------ -----  ----- -----------
TDE0003   conserved hypothetical protein    transmembrane     10    28    Phd
                                            transmembrane     52    71    Phd
                                            transmembrane     76    96    Phd
                                            transmembrane     116   139   Phd
                                            transmembrane     159   176   Phd
                                            transmembrane     181   204   Phd
                                            transmembrane     221   238   Phd

TDE0004   conserved hypothetical protein    transmembrane     24    44    Phd
                                            transmembrane     49    73    Phd
                                            transmembrane     78    95    Phd
                                            transmembrane     121   139   Phd
                                            transmembrane     159   181   Phd
                                            transmembrane     186   210   Phd

TDE0008   heavy metal-transporting ATPase;  transmembrane     112   129   Phd
          P-type ATPase
                                            transmembrane     143   160   Phd
                                            transmembrane     183   200   Phd
                                            transmembrane     377   395   Phd
                                            transmembrane     400   418   Phd
                                            transmembrane     738   762   Phd

TDE0012   carbon starvation protein A       transmembrane     1     19    Phd
                                            transmembrane     53    77    Phd
                                            transmembrane     82    99    Phd
                                            transmembrane     118   140   Phd
                                            transmembrane     161   185   Phd
                                            transmembrane     190   208   Phd
                                            transmembrane     231   248   Phd
                                            transmembrane     272   289   Phd
                                            transmembrane     315   335   Phd
                                            transmembrane     368   390   Phd
                                            transmembrane     414   434   Phd
                                            transmembrane     448   465   Phd

TDE0014   conserved hypothetical protein    transmembrane     1     20    Phd
                                            transmembrane     75    92    Phd
                                            transmembrane     101   119   Phd

TDE0021   sn-1,2-diacylglycerol             transmembrane     14    31    Phd
          cholinephosphorous
          (aminoalcoholphosphotransferase)
                                            transmembrane     36    53    Phd
                                            transmembrane     61    78    Phd
                                            transmembrane     109   133   Phd
                                            transmembrane     161   178   Phd
                                            transmembrane     191   213   Phd
                                            transmembrane     218   242   Phd
                                            transmembrane     247   264   Phd
                                            transmembrane     289   313   Phd

TDE0023   conserved hypothetical protein    transmembrane     59    76    Phd
          (possible acetyltransferase)

TDE0026   pheromone shutdown protein        transmembrane     256   273   Phd
                                            transmembrane     292   310   Phd
                                            transmembrane     315   334   Phd
                                            transmembrane     368   390   Phd

TDE0027   conserved hypothetical protein    transmembrane     233   250   Phd

TDE0028   ABC transporter ATP-binding       transmembrane     35    52    Phd
          protein, HlyB family
                                            transmembrane     70    87    Phd
                                            transmembrane     158   175   Phd
                                            transmembrane     183   200   Phd
                                            transmembrane     280   300   Phd
                                            transmembrane     308   325   Phd

TDE0029   ABC transporter ATP-binding       transmembrane     25    42    Phd
          protein, HlyB family
                                            transmembrane     63    80    Phd
                                            transmembrane     140   157   Phd
                                            transmembrane     162   179   Phd
                                            transmembrane     255   272   Phd
                                            transmembrane     277   297   Phd

TDE0030   prolipoprotein diacylglyceryl     transmembrane     15    32    Phd
          transferase
                                            transmembrane     46    66    Phd
                                            transmembrane     87    108   Phd
                                            transmembrane     124   148   Phd
                                            transmembrane     170   188   Phd
                                            transmembrane     196   213   Phd
                                            transmembrane     229   246   Phd

TDE0031   hypothetical protein              transmembrane     5     29    Phd
                                            transmembrane     56    78    Phd

TDE0032   two-component sensor histidine    transmembrane     1     20    Phd
          kinase
                                            transmembrane     131   148   Phd

TDE0034   hypothetical protein              transmembrane     16    37    Phd

TDE0045   ABC transporter, ATP-binding      transmembrane     23    40    Phd
          protein
                                            transmembrane     60    77    Phd
                                            transmembrane     149   173   Phd
                                            transmembrane     253   277   Phd

TDE0047   imidazolonepropionase             transmembrane     280   297   Phd
          (imidazolone-5-propionate
          hydrolase)
                                            transmembrane     336   353   Phd

TDE0050   rRNA methyltransferase (Spou      transmembrane     233   250   Phd
          family)

TDE0051   alcohol dehydrogenase             transmembrane     91    108   Phd
                                            transmembrane     185   202   Phd
                                            transmembrane     249   267   Phd
                                            transmembrane     276   293   Phd

TDE0052   flagellar biosynthetic protein Q  transmembrane     16    40    Phd
                                            transmembrane     55    77    Phd

TDE0053   flagellar biosynthetic protein R  transmembrane     14    32    Phd
                                            transmembrane     41    58    Phd
                                            transmembrane     72    95    Phd
                                            transmembrane     100   117   Phd
                                            transmembrane     126   143   Phd
                                            transmembrane     179   203   Phd
                                            transmembrane     220   244   Phd

TDE0054   flagellar biosynthetic protein    transmembrane     67    88    Phd
          FlhB
                                            transmembrane     107   131   Phd
                                            transmembrane     172   196   Phd
                                            transmembrane     212   235   Phd
                                            transmembrane     359   376   Phd

TDE0055   flagellar biosynthesis protein    transmembrane     17    41    Phd
          FlhA
                                            transmembrane     64    81    Phd
                                            transmembrane     115   132   Phd
                                            transmembrane     203   220   Phd
                                            transmembrane     243   260   Phd
                                            transmembrane     286   310   Phd

TDE0060   hypothetical protein              transmembrane     42    62    Phd

TDE0072   methyl-accepting chemotaxis       transmembrane     25    42    Phd
          protein
                                            transmembrane     309   328   Phd

TDE0074   conserved hypothetical protein    transmembrane     19    43    Phd
          (possible transporter)
                                            transmembrane     48    65    Phd
                                            transmembrane     97    121   Phd
                                            transmembrane     126   146   Phd
                                            transmembrane     156   174   Phd
                                            transmembrane     198   215   Phd
                                            transmembrane     234   251   Phd
                                            transmembrane     269   293   Phd
                                            transmembrane     298   315   Phd
                                            transmembrane     335   352   Phd
                                            transmembrane     357   376   Phd
                                            transmembrane     396   413   Phd
                                            transmembrane     418   436   Phd

TDE0080   glycine betaine aldehyde          transmembrane     180   197   Phd
          dehydrogenase

TDE0084   phosphoenolpyruvate-protein       transmembrane     393   410   Phd
          kinase; PTS system, enzyme I

TDE0087   Trk system potassium uptake       transmembrane     78    95    Phd
          protein
                                            transmembrane     325   342   Phd
                                            transmembrane     347   366   Phd

TDE0088   Trk system potassium uptake       transmembrane     10    28    Phd
          protein
                                            transmembrane     38    57    Phd
                                            transmembrane     71    95    Phd
                                            transmembrane     100   117   Phd
                                            transmembrane     139   156   Phd
                                            transmembrane     184   205   Phd
                                            transmembrane     236   253   Phd
                                            transmembrane     277   294   Phd
                                            transmembrane     299   316   Phd
                                            transmembrane     329   347   Phd
                                            transmembrane     393   410   Phd
                                            transmembrane     415   432   Phd
                                            transmembrane     445   469   Phd

TDE0089   conserved hypothetical protein    transmembrane     17    36    Phd
                                            transmembrane     432   450   Phd

TDE0090   hypothetical protein              transmembrane     98    115   Phd

TDE0094   hypothetical protein              transmembrane     23    40    Phd

TDE0104   3-dehydroquinate synthetase       transmembrane     89    107   Phd

TDE0105   MTA/SAH nucleosidase              transmembrane     46    65    Phd
                                            transmembrane     186   203   Phd

TDE0110   peptidase family M23/M37 protein  transmembrane     61    85    Phd

TDE0116   conserved hypothetical protein    transmembrane     6     23    Phd
                                            transmembrane     71    88    Phd
                                            transmembrane     120   137   Phd
                                            transmembrane     151   169   Phd
                                            transmembrane     195   219   Phd
                                            transmembrane     224   241   Phd
                                            transmembrane     262   283   Phd

TDE0121   phosphoglycerol transferase I     transmembrane     25    43    Phd
                                            transmembrane     70    89    Phd
                                            transmembrane     115   132   Phd

TDE0124   integral membrane protein         transmembrane     18    37    Phd
                                            transmembrane     42    59    Phd
                                            transmembrane     64    81    Phd
                                            transmembrane     96    120   Phd
                                            transmembrane     125   149   Phd
                                            transmembrane     175   194   Phd

TDE0125   sensory transduction histidine    transmembrane     55    72    Phd
          kinase (GGDEF family)
                                            transmembrane     180   197   Phd

TDE0128   sensory box protein/GGDEF family  transmembrane     13    30    Phd
          protein (related to methyl-
          accepting chemotaxis protein)
                                            transmembrane     291   308   Phd
                                            transmembrane     415   432   Phd

TDE0130   proton/sodium:glutamate           transmembrane     1     20    Phd
          symporter protein
                                            transmembrane     34    51    Phd
                                            transmembrane     65    88    Phd
                                            transmembrane     106   126   Phd
                                            transmembrane     182   199   Phd
                                            transmembrane     231   249   Phd
                                            transmembrane     260   278   Phd
                                            transmembrane     283   301   Phd
                                            transmembrane     346   370   Phd
                                            transmembrane     375   399   Phd
                                            transmembrane     404   421   Phd

TDE0144   thiamine ABC transporter,         transmembrane     34    54    Phd
          permease protein
                                            transmembrane     82    103   Phd
                                            transmembrane     124   144   Phd
                                            transmembrane     166   183   Phd
                                            transmembrane     218   242   Phd
                                            transmembrane     274   291   Phd
                                            transmembrane     323   340   Phd
                                            transmembrane     357   374   Phd
                                            transmembrane     379   401   Phd
                                            transmembrane     406   424   Phd
                                            transmembrane     434   451   Phd
                                            transmembrane     489   506   Phd
                                            transmembrane     515   532   Phd
                                            transmembrane     537   554   Phd

TDE0148   membrane-associated sensory       transmembrane     21    40    Phd
          histidine kinase-like ATPase

TDE0150   hypothetical protein              transmembrane     30    47    Phd
                                            transmembrane     52    70    Phd
                                            transmembrane     107   125   Phd
                                            transmembrane     153   177   Phd
                                            transmembrane     195   219   Phd
                                            transmembrane     230   247   Phd
                                            transmembrane     252   276   Phd
                                            transmembrane     281   298   Phd
                                            transmembrane     400   417   Phd

TDE0151   conserved hypothetical protein    transmembrane     7     24    Phd
                                            transmembrane     29    46    Phd
                                            transmembrane     68    86    Phd
                                            transmembrane     99    116   Phd
                                            transmembrane     133   150   Phd
                                            transmembrane     187   204   Phd
                                            transmembrane     254   271   Phd
                                            transmembrane     283   300   Phd
                                            transmembrane     324   341   Phd
                                            transmembrane     356   373   Phd
                                            transmembrane     385   405   Phd

TDE0152   cationic amino acid transporter   transmembrane     16    33    Phd
                                            transmembrane     38    62    Phd
                                            transmembrane     94    118   Phd
                                            transmembrane     141   158   Phd
                                            transmembrane     171   189   Phd
                                            transmembrane     210   227   Phd
                                            transmembrane     245   262   Phd
                                            transmembrane     288   311   Phd
                                            transmembrane     340   357   Phd
                                            transmembrane     362   382   Phd
                                            transmembrane     400   417   Phd
                                            transmembrane     422   439   Phd

TDE0154   adenylate cyclase                 transmembrane     14    31    Phd
                                            transmembrane     210   227   Phd
                                            transmembrane     237   256   Phd
                                            transmembrane     270   289   Phd
                                            transmembrane     295   313   Phd
                                            transmembrane     324   345   Phd
                                            transmembrane     360   377   Phd
                                            transmembrane     383   400   Phd

TDE0155   adenylate cyclase                 transmembrane     197   214   Phd
                                            transmembrane     238   256   Phd
                                            transmembrane     261   279   Phd
                                            transmembrane     289   307   Phd
                                            transmembrane     316   333   Phd
                                            transmembrane     346   363   Phd
                                            transmembrane     370   387   Phd

TDE0156   guanylyl cyclase                  transmembrane     763   781   Phd

TDE0166   hypothetical protein              transmembrane     18    35    Phd
                                            transmembrane     50    67    Phd
                                            transmembrane     85    102   Phd
                                            transmembrane     107   126   Phd
                                            transmembrane     144   168   Phd
                                            transmembrane     193   211   Phd
                                            transmembrane     244   261   Phd

TDE0169   methyl-accepting chemotaxis       transmembrane     11    28    Phd
          protein
                                            transmembrane     173   191   Phd

TDE0172   bacitracin resistance protein     transmembrane     45    68    Phd
          (undecaprenol kinase)
                                            transmembrane     89    106   Phd
                                            transmembrane     113   130   Phd
                                            transmembrane     149   167   Phd
                                            transmembrane     190   207   Phd
                                            transmembrane     216   238   Phd
                                            transmembrane     245   262   Phd

TDE0173   cell division protein             transmembrane     16    36    Phd
                                            transmembrane     56    75    Phd
                                            transmembrane     83    100   Phd
                                            transmembrane     122   139   Phd

TDE0174   nicotinate                        transmembrane     122   139   Phd
          phosphoribosyltransferase

TDE0176   membrane protein                  transmembrane     15    32    Phd
                                            transmembrane     45    62    Phd
                                            transmembrane     67    84    Phd
                                            transmembrane     109   126   Phd
                                            transmembrane     145   164   Phd
                                            transmembrane     195   215   Phd
                                            transmembrane     220   244   Phd
                                            transmembrane     249   266   Phd
                                            transmembrane     283   300   Phd
                                            transmembrane     312   331   Phd

TDE0177   membrane protein                  transmembrane     5     29    Phd
                                            transmembrane     52    70    Phd
                                            transmembrane     92    112   Phd
                                            transmembrane     159   176   Phd
                                            transmembrane     192   209   Phd

TDE0178   methyl-accepting chemotaxis       transmembrane     12    29    Phd
          protein
                                            transmembrane     293   315   Phd

TDE0181   methyl-accepting chemotaxis       transmembrane     11    28    Phd
          protein
                                            transmembrane     292   312   Phd

TDE0183   ABC transporter permease protein  transmembrane     29    46    Phd
                                            transmembrane     94    113   Phd
                                            transmembrane     128   145   Phd
                                            transmembrane     178   196   Phd
                                            transmembrane     230   247   Phd
                                            transmembrane     275   292   Phd
                                            transmembrane     325   343   Phd
                                            transmembrane     402   419   Phd
                                            transmembrane     444   468   Phd
                                            transmembrane     524   542   Phd
                                            transmembrane     569   586   Phd

TDE0184   ABC transporter, ATP-binding      transmembrane     22    39    Phd
          protein
                                            transmembrane     62    79    Phd
                                            transmembrane     139   163   Phd
                                            transmembrane     168   185   Phd
                                            transmembrane     258   282   Phd
                                            transmembrane     287   304   Phd

TDE0185   ABC transporter, ATP-binding      transmembrane     22    39    Phd
          protein
                                            transmembrane     63    81    Phd
                                            transmembrane     142   166   Phd
                                            transmembrane     253   270   Phd
                                            transmembrane     278   296   Phd

TDE0189   conserved hypothetical protein    transmembrane     5     22    Phd
          (possible transporter)
                                            transmembrane     28    47    Phd
                                            transmembrane     52    69    Phd
                                            transmembrane     74    94    Phd
                                            transmembrane     99    117   Phd
                                            transmembrane     142   166   Phd
                                            transmembrane     190   214   Phd
                                            transmembrane     231   253   Phd

TDE0190   conserved hypothetical protein    transmembrane     12    29    Phd
          (possible transporter)
                                            transmembrane     39    56    Phd
                                            transmembrane     71    88    Phd
                                            transmembrane     93    116   Phd
                                            transmembrane     122   146   Phd
                                            transmembrane     151   168   Phd
                                            transmembrane     183   207   Phd
                                            transmembrane     212   233   Phd
                                            transmembrane     238   257   Phd
                                            transmembrane     264   281   Phd

TDE0199   hypothetical protein              transmembrane     42    59    Phd

TDE0200   tetrapyrrole methylase family     transmembrane     108   125   Phd
          protein

TDE0203   hypothetical protein              transmembrane     56    74    Phd
                                            transmembrane     79    96    Phd

TDE0207   gluconate permease (low affinity  transmembrane     5     24    Phd
          gluconate transporter)
                                            transmembrane     29    52    Phd
                                            transmembrane     58    78    Phd
                                            transmembrane     106   126   Phd
                                            transmembrane     141   158   Phd
                                            transmembrane     175   198   Phd
                                            transmembrane     235   254   Phd
                                            transmembrane     270   287   Phd
                                            transmembrane     310   331   Phd
                                            transmembrane     339   358   Phd
                                            transmembrane     368   392   Phd
                                            transmembrane     397   414   Phd
                                            transmembrane     433   450   Phd

TDE0209   arsenical pump membrane protein   transmembrane     7     24    Phd
                                            transmembrane     30    54    Phd
                                            transmembrane     59    76    Phd
                                            transmembrane     93    112   Phd
                                            transmembrane     132   149   Phd
                                            transmembrane     154   171   Phd
                                            transmembrane     176   198   Phd
                                            transmembrane     218   235   Phd
                                            transmembrane     249   266   Phd
                                            transmembrane     286   303   Phd
                                            transmembrane     309   333   Phd
                                            transmembrane     338   357   Phd
                                            transmembrane     362   383   Phd
                                            transmembrane     409   426   Phd

TDE0211   ABC transporter                   transmembrane     12    29    Phd
                                            transmembrane     34    51    Phd
                                            transmembrane     56    80    Phd
                                            transmembrane     108   132   Phd
                                            transmembrane     179   196   Phd
                                            transmembrane     217   234   Phd

TDE0214   Treponema-specific protein,       transmembrane     188   205   Phd
          uncharacterized

TDE0234   ABC transporter ATP-binding       transmembrane     21    41    Phd
          protein, HlyB family
                                            transmembrane     53    70    Phd
                                            transmembrane     130   147   Phd
                                            transmembrane     152   170   Phd
                                            transmembrane     256   273   Phd
                                            transmembrane     278   295   Phd

TDE0238.1 hypothetical protein              transmembrane     73    91    Phd

TDE0240   3-oxoacyl-(acyl-carrier-protein)  transmembrane     263   280   Phd
          synthase III (glycine reductase
          complex protein C)

TDE0241   conserved hypothetical protein    transmembrane     18    37    Phd
                                            transmembrane     42    62    Phd
                                            transmembrane     67    91    Phd
                                            transmembrane     116   133   Phd
                                            transmembrane     168   185   Phd

TDE0242   possible ABC transporter          transmembrane     17    41    Phd
          permease for cobalt
                                            transmembrane     51    68    Phd
                                            transmembrane     73    97    Phd
                                            transmembrane     114   132   Phd
                                            transmembrane     162   180   Phd
                                            transmembrane     214   231   Phd

TDE0244   ABC transporter, ATP-             transmembrane     25    42    Phd
          binding/permease protein
                                            transmembrane     53    70    Phd
                                            transmembrane     140   164   Phd
                                            transmembrane     247   265   Phd
                                            transmembrane     270   287   Phd

TDE0245   ABC transporter, ATP-             transmembrane     23    40    Phd
          binding/permease protein
                                            transmembrane     54    71    Phd
                                            transmembrane     137   161   Phd
                                            transmembrane     244   261   Phd
                                            transmembrane     268   285   Phd

TDE0247   Mg-chelatase subunit (ChlI)       transmembrane     51    72    Phd

TDE0250   sodium-dependent tryptophan       transmembrane     19    36    Phd
          transporter
                                            transmembrane     41    59    Phd
                                            transmembrane     100   122   Phd
                                            transmembrane     148   167   Phd
                                            transmembrane     179   196   Phd
                                            transmembrane     216   235   Phd
                                            transmembrane     262   279   Phd
                                            transmembrane     305   324   Phd
                                            transmembrane     345   362   Phd
                                            transmembrane     372   392   Phd
                                            transmembrane     421   438   Phd

TDE0256   conserved hypothetical protein    transmembrane     17    41    Phd
          (possible ABC transporter
          permease for cobalt)
                                            transmembrane     51    68    Phd
                                            transmembrane     73    97    Phd
                                            transmembrane     117   134   Phd
                                            transmembrane     170   187   Phd
                                            transmembrane     213   230   Phd

TDE0257   possible membrane protein         transmembrane     17    37    Phd
                                            transmembrane     42    60    Phd
                                            transmembrane     71    95    Phd
                                            transmembrane     125   145   Phd
                                            transmembrane     164   184   Phd

TDE0269   hypothetical protein              transmembrane     6     23    Phd
                                            transmembrane     56    76    Phd
                                            transmembrane     84    101   Phd
                                            transmembrane     106   123   Phd
                                            transmembrane     143   161   Phd

TDE0273    ABC transporter, ATP-            transmembrane     29    48    Phd
          binding/permease protein
                                            transmembrane     63    82    Phd
                                            transmembrane     148   172   Phd
                                            transmembrane     248   266   Phd
                                            transmembrane     283   300   Phd

TDE0274   ABC transporter, ATP-             transmembrane     29    48    Phd
          binding/permease protein
                                            transmembrane     57    75    Phd
                                            transmembrane     147   164   Phd
                                            transmembrane     169   186   Phd
                                            transmembrane     253   270   Phd
                                            transmembrane     275   297   Phd
                                            transmembrane     525   542   Phd

TDE0275   Abi, CAAX amino terminal          transmembrane     12    29    Phd
          protease family
                                            transmembrane     42    59    Phd
                                            transmembrane     73    90    Phd
                                            transmembrane     123   140   Phd
                                            transmembrane     153   177   Phd
                                            transmembrane     183   207   Phd

TDE0283   cobalt ABC transporter permease   transmembrane     27    44    Phd
                                            transmembrane     49    73    Phd
                                            transmembrane     78    101   Phd
                                            transmembrane     106   126   Phd
                                            transmembrane     153   170   Phd
                                            transmembrane     208   225   Phd

TDE0283.1 hypothetical protein              transmembrane     30    54    Phd

TDE0284   conserved hypothetical protein;   transmembrane     20    38    Phd
          possible membrane protein
                                            transmembrane     43    61    Phd
                                            transmembrane     72    96    Phd
                                            transmembrane     120   138   Phd
                                            transmembrane     163   182   Phd

TDE0286   ABC transporter, ATP-binding      transmembrane     18    35    Phd
          protein
                                            transmembrane     50    67    Phd
                                            transmembrane     123   147   Phd
                                            transmembrane     152   169   Phd
                                            transmembrane     241   265   Phd
                                            transmembrane     270   287   Phd

TDE0287   ABC transporter, ATP-binding      transmembrane     13    30    Phd
          protein
                                            transmembrane     58    75    Phd
                                            transmembrane     129   153   Phd
                                            transmembrane     158   175   Phd
                                            transmembrane     246   263   Phd
                                            transmembrane     269   286   Phd

TDE0293   DNA damage-inducible protein      transmembrane     37    56    Phd
                                            transmembrane     62    79    Phd
                                            transmembrane     113   130   Phd
                                            transmembrane     146   163   Phd
                                            transmembrane     178   196   Phd
                                            transmembrane     207   231   Phd
                                            transmembrane     263   287   Phd
                                            transmembrane     295   314   Phd
                                            transmembrane     341   358   Phd
                                            transmembrane     378   396   Phd
                                            transmembrane     419   443   Phd

TDE0297   hypothetical protein              transmembrane     5     25    Phd
                                            transmembrane     30    54    Phd

TDE0306   proteinase IV                     transmembrane     21    42    Phd

TDE0309   hypothetical protein              transmembrane     6     23    Phd

TDE0310   hypothetical protein              transmembrane     12    29    Phd

TDE0312   Na+-transporting ATP synthase     transmembrane     33    50    Phd
                                            transmembrane     70    87    Phd
                                            transmembrane     98    115   Phd
                                            transmembrane     131   150   Phd
                                            transmembrane     164   181   Phd
                                            transmembrane     192   213   Phd
                                            transmembrane     251   270   Phd
                                            transmembrane     279   296   Phd
                                            transmembrane     310   329   Phd
                                            transmembrane     360   377   Phd
                                            transmembrane     415   432   Phd
                                            transmembrane     440   457   Phd
                                            transmembrane     485   502   Phd
                                            transmembrane     526   545   Phd

TDE0314   Treponema-specific protein,       transmembrane     10    27    Phd
          uncharacterized
                                            transmembrane     46    63    Phd
                                            transmembrane     124   142   Phd
                                            transmembrane     194   211   Phd

TDE0315   ABC transporter, ATP-             transmembrane     27    44    Phd
          binding/permease protein
                                            transmembrane     65    83    Phd
                                            transmembrane     151   173   Phd
                                            transmembrane     251   268   Phd
                                            transmembrane     282   299   Phd

TDE0316   ABC transporter ATP-              transmembrane     18    36    Phd
          binding/membrane spanning
          permease - possible multidrug
          resistance
                                            transmembrane     47    64    Phd
                                            transmembrane     127   151   Phd
                                            transmembrane     156   173   Phd
                                            transmembrane     233   257   Phd
                                            transmembrane     262   279   Phd

TDE0320   hemolysin-related protein         transmembrane     9     28    Phd
                                            transmembrane     69    86    Phd
                                            transmembrane     99    116   Phd
                                            transmembrane     132   149   Phd
                                            transmembrane     276   293   Phd
                                            transmembrane     346   363   Phd

TDE0321   hemolysin-related protein         transmembrane     10    27    Phd
                                            transmembrane     72    89    Phd
                                            transmembrane     95    117   Phd
                                            transmembrane     123   147   Phd

TDE0323   conserved hypothetical protein    transmembrane     6     30    Phd
                                            transmembrane     35    52    Phd
                                            transmembrane     68    85    Phd
                                            transmembrane     105   123   Phd
                                            transmembrane     128   152   Phd
                                            transmembrane     165   182   Phd
                                            transmembrane     200   217   Phd
                                            transmembrane     229   246   Phd
                                            transmembrane     251   270   Phd
                                            transmembrane     281   300   Phd
                                            transmembrane     323   343   Phd
                                            transmembrane     362   380   Phd
                                            transmembrane     390   414   Phd
                                            transmembrane     419   436   Phd
                                            transmembrane     447   469   Phd

TDE0328   lipoyl-binding domain protein     transmembrane     38    55    Phd
                                            transmembrane     157   181   Phd

TDE0333   DNA damage-inducible protein      transmembrane     23    41    Phd
                                            transmembrane     49    73    Phd
                                            transmembrane     100   123   Phd
                                            transmembrane     132   149   Phd
                                            transmembrane     169   188   Phd
                                            transmembrane     197   218   Phd
                                            transmembrane     238   255   Phd
                                            transmembrane     274   291   Phd
                                            transmembrane     319   341   Phd
                                            transmembrane     359   381   Phd
                                            transmembrane     386   410   Phd
                                            transmembrane     416   433   Phd

TDE0334   hypothetical protein              transmembrane     1     22    Phd
                                            transmembrane     43    60    Phd
                                            transmembrane     112   130   Phd

TDE0335   ribonucleoside-diphosphate        transmembrane     183   200   Phd
          reductase, beta subunit

TDE0336   conserved hypothetical protein    transmembrane     17    41    Phd
          (probable membrane protein)
                                            transmembrane     73    97    Phd
                                            transmembrane     169   193   Phd
                                            transmembrane     223   247   Phd
                                            transmembrane     252   276   Phd
                                            transmembrane     281   300   Phd
                                            transmembrane     321   345   Phd

TDE0338   Treponema-specific protein;       transmembrane     21    38    Phd
          uncharacterized
                                            transmembrane     61    80    Phd

TDE0342   virulence factor protein          transmembrane     109   129   Phd
                                            transmembrane     146   163   Phd
                                            transmembrane     176   193   Phd
                                            transmembrane     204   221   Phd
                                            transmembrane     247   264   Phd
                                            transmembrane     291   308   Phd
                                            transmembrane     328   345   Phd
                                            transmembrane     371   388   Phd
                                            transmembrane     407   431   Phd
                                            transmembrane     436   453   Phd
                                            transmembrane     460   479   Phd
                                            transmembrane     501   519   Phd

TDE0342.1 hypothetical protein              transmembrane     22    39    Phd
                                            transmembrane     47    64    Phd
                                            transmembrane     78    95    Phd

TDE0343   conserved hypothetical protein    transmembrane     1     20    Phd
          (similar to epoxide hydrolase)
                                            transmembrane     136   153   Phd

TDE0345   methyl-accepting chemotaxis       transmembrane     6     23    Phd
          protein

TDE0346   chymotrypsin-like protease        transmembrane     34    52    Phd
          (related to methyl accepting
          chemotaxis protein)
                                            transmembrane     167   191   Phd

TDE0347   methyl-accepting chemotaxis       transmembrane     32    49    Phd
          protein
                                            transmembrane     177   194   Phd
                                            transmembrane     320   343   Phd

TDE0350   DNA damage-inducible protein      transmembrane     21    38    Phd
                                            transmembrane     54    73    Phd
                                            transmembrane     100   124   Phd
                                            transmembrane     139   157   Phd
                                            transmembrane     170   187   Phd
                                            transmembrane     192   216   Phd
                                            transmembrane     253   270   Phd
                                            transmembrane     277   295   Phd
                                            transmembrane     323   342   Phd
                                            transmembrane     362   386   Phd
                                            transmembrane     392   416   Phd
                                            transmembrane     425   442   Phd

TDE0359   ABC transporter, ATP-             transmembrane     37    54    Phd
          binding/permease protein
                                            transmembrane     75    92    Phd
                                            transmembrane     165   189   Phd
                                            transmembrane     265   284   Phd
                                            transmembrane     290   307   Phd

TDE0360   ABC transporter, ATP-             transmembrane     24    41    Phd
          binding/permease protein
                                            transmembrane     56    74    Phd
                                            transmembrane     134   151   Phd
                                            transmembrane     156   176   Phd
                                            transmembrane     243   260   Phd
                                            transmembrane     284   301   Phd

TDE0361   sodium/glutamate symporter        transmembrane     11    28    Phd
                                            transmembrane     37    54    Phd
                                            transmembrane     68    85    Phd
                                            transmembrane     96    114   Phd
                                            transmembrane     119   137   Phd
                                            transmembrane     156   175   Phd
                                            transmembrane     276   293   Phd
                                            transmembrane     304   321   Phd
                                            transmembrane     343   360   Phd
                                            transmembrane     365   382   Phd
                                            transmembrane     397   414   Phd
                                            transmembrane     430   450   Phd

TDE0364   ABC transporter, ATP-binding      transmembrane     12    29    Phd
          protein
                                            transmembrane     46    63    Phd
                                            transmembrane     126   150   Phd
                                            transmembrane     237   254   Phd
                                            transmembrane     262   279   Phd

TDE0371   hypothetical protein              transmembrane     12    29    Phd

TDE0372   ABC transporter, ATP-binding      transmembrane     11    28    Phd
          protein predicted for
          multidrug/protein/lipid
          transport
                                            transmembrane     50    67    Phd
                                            transmembrane     130   154   Phd
                                            transmembrane     238   255   Phd
                                            transmembrane     265   282   Phd

TDE0373   ABC-type multidrug/protein/lipid  transmembrane     43    60    Phd
          transport system, ATPase
          component
                                            transmembrane     122   146   Phd
                                            transmembrane     230   249   Phd
                                            transmembrane     254   271   Phd

TDE0374   conserved hypothetical protein;   transmembrane     132   149   Phd
          possible glycosyltransferase
                                            transmembrane     313   335   Phd

TDE0376   iron(III) ABC transporter,        transmembrane     17    36    Phd
          permease protein
                                            transmembrane     72    89    Phd
                                            transmembrane     100   117   Phd
                                            transmembrane     145   163   Phd
                                            transmembrane     188   205   Phd
                                            transmembrane     218   235   Phd
                                            transmembrane     245   262   Phd
                                            transmembrane     292   311   Phd
                                            transmembrane     347   364   Phd
                                            transmembrane     383   400   Phd
                                            transmembrane     405   422   Phd
                                            transmembrane     478   495   Phd
                                            transmembrane     514   531   Phd

TDE0379   hypothetical protein              transmembrane     8     25    Phd

TDE0381   hypothetical protein              transmembrane     17    35    Phd
                                            transmembrane     48    72    Phd

TDE0382   hypothetical protein              transmembrane     11    28    Phd

TDE0385   lipid export ABC transport        transmembrane     16    33    Phd
          protein
                                            transmembrane     56    75    Phd
                                            transmembrane     125   145   Phd
                                            transmembrane     150   170   Phd
                                            transmembrane     242   259   Phd
                                            transmembrane     271   293   Phd

TDE0393   possible transcriptional          transmembrane     149   166   Phd
          regulator

TDE0394   ABC related oligopeptide          transmembrane     12    29    Phd
          transport permease (oppB
          homolog)
                                            transmembrane     99    117   Phd
                                            transmembrane     135   157   Phd
                                            transmembrane     185   203   Phd
                                            transmembrane     243   267   Phd
                                            transmembrane     289   309   Phd

TDE0395   ABC related oligopeptide          transmembrane     22    39    Phd
          transporter permease (oppC
          homolog)
                                            transmembrane     77    101   Phd
                                            transmembrane     120   144   Phd
                                            transmembrane     192   211   Phd
                                            transmembrane     245   264   Phd

TDE0401   adenylate cyclase                 transmembrane     24    41    Phd
                                            transmembrane     72    96    Phd
                                            transmembrane     101   119   Phd
                                            transmembrane     140   157   Phd
                                            transmembrane     241   258   Phd
                                            transmembrane     435   459   Phd

TDE0411   adenylate cyclase                 transmembrane     10    27    Phd
                                            transmembrane     315   332   Phd
                                            transmembrane     349   373   Phd
                                            transmembrane     378   395   Phd

TDE0425   multidrug ABC transport system,   transmembrane     172   189   Phd
          ATP binding/permease
                                            transmembrane     204   221   Phd
                                            transmembrane     295   319   Phd
                                            transmembrane     415   432   Phd

TDE0426   secretion protein (probable HlyD  transmembrane     28    45    Phd
          family)

TDE0439   hypothetical protein              transmembrane     6     23    Phd
                                            transmembrane     73    90    Phd
                                            transmembrane     121   142   Phd
                                            transmembrane     166   183   Phd

TDE0443   hypothetical protein              transmembrane     231   249   Phd
                                            transmembrane     258   280   Phd
                                            transmembrane     285   302   Phd

TDE0445   cationic amino acid transporter   transmembrane     15    33    Phd
                                            transmembrane     38    58    Phd
                                            transmembrane     87    111   Phd
                                            transmembrane     116   140   Phd
                                            transmembrane     150   169   Phd
                                            transmembrane     187   204   Phd
                                            transmembrane     226   247   Phd
                                            transmembrane     269   291   Phd
                                            transmembrane     325   348   Phd
                                            transmembrane     353   370   Phd
                                            transmembrane     377   394   Phd
                                            transmembrane     400   417   Phd

TDE0450   M20/M25/M40 family peptidase      transmembrane     1     20    Phd
                                            transmembrane     293   310   Phd

TDE0460   conserved hypothetical protein    transmembrane     27    44    Phd
                                            transmembrane     63    80    Phd
                                            transmembrane     85    102   Phd
                                            transmembrane     108   125   Phd

TDE0461   hypothetical protein              transmembrane     20    38    Phd

TDE0469   conserved hypothetical protein    transmembrane     21    38    Phd
          (possible antibiotic transport
          protein)
                                            transmembrane     228   245   Phd
                                            transmembrane     250   267   Phd
                                            transmembrane     272   292   Phd
                                            transmembrane     332   349   Phd
                                            transmembrane     354   377   Phd
                                            transmembrane     414   432   Phd
                                            transmembrane     727   744   Phd
                                            transmembrane     749   766   Phd
                                            transmembrane     776   793   Phd
                                            transmembrane     820   837   Phd
                                            transmembrane     847   865   Phd

TDE0470   cell division protein (possible   transmembrane     40    57    Phd
          ATP-dependent Zn protease)
                                            transmembrane     152   169   Phd

TDE0479   prismane protein, hybrid-cluster  transmembrane     481   499   Phd
          protein

TDE0483   conserved hypothetical protein    transmembrane     8     26    Phd
          (possible membrane protein)
                                            transmembrane     45    69    Phd
                                            transmembrane     74    91    Phd
                                            transmembrane     113   132   Phd
                                            transmembrane     142   166   Phd

TDE0484   methyl-accepting chemotaxis       transmembrane     23    40    Phd
          protein
                                            transmembrane     301   321   Phd

TDE0485   conserved hypothetical protein    transmembrane     32    50    Phd
          (possible membrane protein)
                                            transmembrane     55    72    Phd
                                            transmembrane     120   144   Phd
                                            transmembrane     152   169   Phd
                                            transmembrane     202   219   Phd
                                            transmembrane     231   249   Phd

TDE0486   possible ABC-type multidrug       transmembrane     23    40    Phd
          transport system, permease
          component
                                            transmembrane     57    74    Phd
                                            transmembrane     90    108   Phd
                                            transmembrane     113   131   Phd
                                            transmembrane     137   161   Phd
                                            transmembrane     166   190   Phd
                                            transmembrane     212   229   Phd
                                            transmembrane     237   254   Phd

TDE0488   conserved hypothetical protein    transmembrane     16    33    Phd

TDE0489   hypothetical protein              transmembrane     162   186   Phd
                                            transmembrane     213   230   Phd
                                            transmembrane     250   274   Phd

TDE0497   hypothetical protein              transmembrane     18    35    Phd
                                            transmembrane     58    75    Phd

TDE0501   hypothetical protein              transmembrane     6     23    Phd

TDE0504   hypothetical protein              transmembrane     37    54    Phd
                                            transmembrane     61    85    Phd

TDE0529   conserved hypothetical protein    transmembrane     10    27    Phd
                                            transmembrane     62    79    Phd
                                            transmembrane     97    116   Phd
                                            transmembrane     134   153   Phd

TDE0533   hypothetical protein              transmembrane     62    79    Phd

TDE0547   hypothetical protein              transmembrane     20    37    Phd
                                            transmembrane     45    62    Phd
                                            transmembrane     71    92    Phd
                                            transmembrane     97    114   Phd
                                            transmembrane     167   184   Phd

TDE0548   hypothetical protein              transmembrane     6     23    Phd

TDE0565   hypothetical protein              transmembrane     17    36    Phd

TDE0568   hypothetical protein              transmembrane     8     25    Phd
                                            transmembrane     38    55    Phd
                                            transmembrane     76    93    Phd

TDE0574   cell surface protein; surface     transmembrane     39    56    Phd
          antigen BspA
                                            transmembrane     141   158   Phd

TDE0579   hypothetical protein              transmembrane     19    40    Phd

TDE0580   hypothetical protein              transmembrane     12    36    Phd
                                            transmembrane     41    58    Phd
                                            transmembrane     84    101   Phd

TDE0581   conserved hypothetical protein    transmembrane     17    41    Phd
          (possible transglutaminase-like
          enzyme)
                                            transmembrane     63    81    Phd
                                            transmembrane     90    107   Phd
                                            transmembrane     128   145   Phd
                                            transmembrane     152   170   Phd
                                            transmembrane     179   196   Phd
                                            transmembrane     445   462   Phd
                                            transmembrane     568   585   Phd
                                            transmembrane     655   672   Phd

TDE0583   conserved hypothetical protein    transmembrane     13    36    Phd
                                            transmembrane     42    61    Phd
                                            transmembrane     82    99    Phd

TDE0584   YcgR-related permease             transmembrane     11    35    Phd
                                            transmembrane     54    77    Phd
                                            transmembrane     84    108   Phd
                                            transmembrane     115   133   Phd
                                            transmembrane     193   210   Phd
                                            transmembrane     226   246   Phd
                                            transmembrane     252   276   Phd
                                            transmembrane     283   306   Phd

TDE0586   hypothetical protein (possible    transmembrane     11    28    Phd
          membrane protein)
                                            transmembrane     38    62    Phd
                                            transmembrane     80    97    Phd

TDE0597   conserved hypothetical protein    transmembrane     58    75    Phd
                                            transmembrane     275   292   Phd

TDE0598   3-oxoacyl-(acyl-carrier-protein)  transmembrane     217   234   Phd
          reductase

TDE0609   conserved hypothetical protein    transmembrane     7     24    Phd
                                            transmembrane     46    63    Phd
                                            transmembrane     92    116   Phd
                                            transmembrane     135   154   Phd
                                            transmembrane     170   194   Phd
                                            transmembrane     199   223   Phd
                                            transmembrane     235   252   Phd
                                            transmembrane     257   279   Phd

TDE0613   hypothetical protein              transmembrane     39    56    Phd
                                            transmembrane     61    78    Phd

TDE0619   methyl-accepting chemotaxis       transmembrane     14    31    Phd
          protein
                                            transmembrane     291   312   Phd

TDE0621   cation efflux pump                transmembrane     24    48    Phd
                                            transmembrane     62    79    Phd
                                            transmembrane     103   123   Phd
                                            transmembrane     144   164   Phd
                                            transmembrane     178   196   Phd
                                            transmembrane     201   222   Phd
                                            transmembrane     249   267   Phd
                                            transmembrane     278   302   Phd
                                            transmembrane     332   356   Phd
                                            transmembrane     369   388   Phd
                                            transmembrane     403   427   Phd
                                            transmembrane     432   449   Phd

TDE0630   sigma B regulation protein        transmembrane     15    32    Phd
                                            transmembrane     60    79    Phd
                                            transmembrane     190   207   Phd
                                            transmembrane     302   319   Phd

TDE0631   sigma factor, probable SigG       transmembrane     1     21    Phd
          regulation protein
                                            transmembrane     37    61    Phd
                                            transmembrane     66    83    Phd
                                            transmembrane     103   121   Phd
                                            transmembrane     143   160   Phd
                                            transmembrane     177   201   Phd
                                            transmembrane     206   223   Phd
                                            transmembrane     237   255   Phd
                                            transmembrane     264   281   Phd
                                            transmembrane     441   458   Phd
                                            transmembrane     576   593   Phd

TDE0634   cation efflux system protein      transmembrane     16    36    Phd
                                            transmembrane     46    63    Phd
                                            transmembrane     85    104   Phd
                                            transmembrane     113   137   Phd
                                            transmembrane     158   175   Phd
                                            transmembrane     180   198   Phd

TDE0635   conserved hypothetical protein    transmembrane     10    27    Phd
                                            transmembrane     110   127   Phd

TDE0638   ABC related oligopeptide          transmembrane     59    76    Phd
          transporter permease (oppC
          homolog)
                                            transmembrane     119   137   Phd
                                            transmembrane     158   182   Phd
                                            transmembrane     187   204   Phd
                                            transmembrane     228   252   Phd
                                            transmembrane     284   301   Phd

TDE0639   ABC related oligopeptide          transmembrane     11    29    Phd
          transporter permease (OppB
          homolog)
                                            transmembrane     101   119   Phd
                                            transmembrane     133   151   Phd
                                            transmembrane     166   186   Phd
                                            transmembrane     228   252   Phd
                                            transmembrane     279   296   Phd

TDE0640   methyl-accepting chemotaxis       transmembrane     29    46    Phd
          protein B
                                            transmembrane     340   358   Phd

TDE0645   conserved hypothetical protein    transmembrane     17    34    Phd

TDE0650   conserved hypothetical protein    transmembrane     27    48    Phd
                                            transmembrane     69    93    Phd
                                            transmembrane     98    115   Phd
                                            transmembrane     132   153   Phd
                                            transmembrane     168   192   Phd
                                            transmembrane     197   217   Phd
                                            transmembrane     253   270   Phd
                                            transmembrane     308   328   Phd

TDE0652   conserved hypothetical protein    transmembrane     13    30    Phd
                                            transmembrane     62    79    Phd
                                            transmembrane     84    101   Phd
                                            transmembrane     121   138   Phd
                                            transmembrane     162   179   Phd
                                            transmembrane     193   210   Phd
                                            transmembrane     223   240   Phd

TDE0653   conserved hypothetical protein    transmembrane     22    39    Phd
                                            transmembrane     55    76    Phd
                                            transmembrane     121   142   Phd
                                            transmembrane     156   176   Phd
                                            transmembrane     181   205   Phd

TDE0656   sensor histidine kinase           transmembrane     22    41    Phd
                                            transmembrane     52    72    Phd

TDE0658   ABC transporter permease and      transmembrane     24    41    Phd
          substrate binding protein
                                            transmembrane     55    73    Phd
                                            transmembrane     106   130   Phd
                                            transmembrane     153   170   Phd
                                            transmembrane     203   220   Phd
                                            transmembrane     225   247   Phd
                                            transmembrane     287   305   Phd
                                            transmembrane     562   579   Phd
                                            transmembrane     616   634   Phd
                                            transmembrane     639   663   Phd

TDE0673   conserved hypothetical protein    transmembrane     7     26    Phd
          (possible permease, cnrT)
                                            transmembrane     32    52    Phd
                                            transmembrane     75    92    Phd
                                            transmembrane     106   130   Phd
                                            transmembrane     135   159   Phd
                                            transmembrane     189   206   Phd
                                            transmembrane     212   230   Phd
                                            transmembrane     243   260   Phd
                                            transmembrane     265   283   Phd

TDE0680   protein-export membrane protein   transmembrane     12    31    Phd
                                            transmembrane     205   222   Phd
                                            transmembrane     235   259   Phd
                                            transmembrane     264   281   Phd
                                            transmembrane     286   304   Phd
                                            transmembrane     338   355   Phd
                                            transmembrane     366   384   Phd

TDE0681   protein-export membrane protein   transmembrane     8     25    Phd
                                            transmembrane     426   443   Phd
                                            transmembrane     451   475   Phd
                                            transmembrane     522   539   Phd
                                            transmembrane     544   561   Phd

TDE0682   conserved hypothetical protein    transmembrane     18    35    Phd
          (possible preprotein translocase
          YajC subunit)

TDE0685   short-chain type                  transmembrane     104   121   Phd
          dehydrogenase/reductase
                                            transmembrane     126   144   Phd
                                            transmembrane     238   257   Phd

TDE0689   5-methylthioribose kinase         transmembrane     99    116   Phd
                                            transmembrane     130   147   Phd
                                            transmembrane     260   277   Phd

TDE0691   ABC transporter, ATP-binding      transmembrane     16    33    Phd
          protein (possible ATPase)
                                            transmembrane     49    66    Phd
                                            transmembrane     132   151   Phd
                                            transmembrane     156   173   Phd
                                            transmembrane     248   272   Phd

TDE0695   conserved hypothetical protein    transmembrane     23    40    Phd
                                            transmembrane     151   169   Phd
                                            transmembrane     195   213   Phd
                                            transmembrane     218   242   Phd
                                            transmembrane     265   282   Phd
                                            transmembrane     295   312   Phd
                                            transmembrane     317   338   Phd

TDE0696   probable ABC-type multidrug       transmembrane     13    30    Phd
          transport system, permease
          component
                                            transmembrane     184   205   Phd
                                            transmembrane     236   259   Phd
                                            transmembrane     267   288   Phd
                                            transmembrane     298   315   Phd
                                            transmembrane     323   340   Phd
                                            transmembrane     354   371   Phd

TDE0701   multidrug ABC transporter,        transmembrane     23    40    Phd
          permease protein
                                            transmembrane     58    75    Phd
                                            transmembrane     99    123   Phd
                                            transmembrane     128   152   Phd
                                            transmembrane     170   189   Phd
                                            transmembrane     194   211   Phd
                                            transmembrane     221   239   Phd

TDE0704   SPFH domain/Band 7 family         transmembrane     6     24    Phd
          protein

TDE0707   conserved hypothetical protein    transmembrane     27    44    Phd
                                            transmembrane     49    66    Phd
                                            transmembrane     82    101   Phd
                                            transmembrane     111   128   Phd
                                            transmembrane     158   175   Phd
                                            transmembrane     182   199   Phd
                                            transmembrane     264   284   Phd
                                            transmembrane     293   310   Phd
                                            transmembrane     329   353   Phd
                                            transmembrane     394   411   Phd
                                            transmembrane     428   446   Phd
                                            transmembrane     728   745   Phd

TDE0711   conserved hypothetical protein    transmembrane     7     24    Phd
                                            transmembrane     37    61    Phd
                                            transmembrane     78    95    Phd
                                            transmembrane     117   134   Phd

TDE0712   conserved hypothetical protein    transmembrane     45    62    Phd
          (possible membrane protein)
                                            transmembrane     129   153   Phd
                                            transmembrane     175   193   Phd
                                            transmembrane     198   216   Phd
                                            transmembrane     232   253   Phd

TDE0715   periplasmic protease              transmembrane     27    44    Phd

TDE0716   Abi, CAAX amino terminal          transmembrane     15    36    Phd
          protease family
                                            transmembrane     41    59    Phd
                                            transmembrane     81    100   Phd
                                            transmembrane     105   122   Phd
                                            transmembrane     138   158   Phd
                                            transmembrane     179   203   Phd
                                            transmembrane     217   234   Phd
                                            transmembrane     239   263   Phd

TDE0718   hypothetical protein              transmembrane     15    39    Phd
                                            transmembrane     44    61    Phd

TDE0719   ABC transporter, ATPase           transmembrane     161   184   Phd
          component
                                            transmembrane     202   220   Phd
                                            transmembrane     225   242   Phd
                                            transmembrane     276   293   Phd
                                            transmembrane     298   317   Phd
                                            transmembrane     392   409   Phd

TDE0720   possible leukotoxin secretion     transmembrane     22    44    Phd
          protein (hlyD family)

TDE0723   possible periplasmic protease     transmembrane     12    29    Phd
          (prc2)

TDE0724   conserved hypothetical protein    transmembrane     6     23    Phd
          (possible periplasmic protease)

TDE0728   possible xanthine dehydrogenase   transmembrane     110   130   Phd
                                            transmembrane     193   210   Phd

TDE0733   hypothetical protein              transmembrane     13    30    Phd
                                            transmembrane     62    79    Phd
                                            transmembrane     349   366   Phd
                                            transmembrane     395   412   Phd
                                            transmembrane     427   444   Phd

TDE0739   hypothetical protein              transmembrane     18    37    Phd

TDE0747   hemin permease (iron (III) ABC    transmembrane     13    32    Phd
          transporter, permease protein)
                                            transmembrane     64    81    Phd
                                            transmembrane     95    119   Phd
                                            transmembrane     124   148   Phd
                                            transmembrane     153   176   Phd
                                            transmembrane     196   216   Phd
                                            transmembrane     241   265   Phd
                                            transmembrane     289   306   Phd
                                            transmembrane     316   333   Phd

TDE0755   Na+/H+ antiporter (NhaC)          transmembrane     10    27    Phd
                                            transmembrane     32    50    Phd
                                            transmembrane     75    99    Phd
                                            transmembrane     104   126   Phd
                                            transmembrane     134   158   Phd
                                            transmembrane     199   216   Phd
                                            transmembrane     258   282   Phd
                                            transmembrane     301   325   Phd
                                            transmembrane     356   373   Phd
                                            transmembrane     414   438   Phd
                                            transmembrane     454   471   Phd

TDE0756.1 hypothetical protein              transmembrane     28    46    Phd

TDE0757   hemin ABC transporter, permease   transmembrane     16    34    Phd
          protein
                                            transmembrane     39    56    Phd
                                            transmembrane     69    93    Phd
                                            transmembrane     110   127   Phd
                                            transmembrane     138   155   Phd
                                            transmembrane     167   186   Phd
                                            transmembrane     215   232   Phd
                                            transmembrane     258   282   Phd
                                            transmembrane     300   317   Phd
                                            transmembrane     325   342   Phd

TDE0787   preprotein translocase subunit    transmembrane     20    37    Phd
          secY
                                            transmembrane     66    90    Phd
                                            transmembrane     117   134   Phd
                                            transmembrane     139   162   Phd
                                            transmembrane     179   196   Phd
                                            transmembrane     208   227   Phd
                                            transmembrane     266   285   Phd
                                            transmembrane     309   326   Phd
                                            transmembrane     367   386   Phd
                                            transmembrane     391   408   Phd

TDE0793.1 hypothetical protein              transmembrane     21    45    Phd

TDE0798   permease of the major             transmembrane     17    41    Phd
          facilitator superfamily
                                            transmembrane     46    66    Phd
                                            transmembrane     88    105   Phd
                                            transmembrane     110   127   Phd
                                            transmembrane     150   167   Phd
                                            transmembrane     184   201   Phd
                                            transmembrane     250   267   Phd
                                            transmembrane     285   302   Phd
                                            transmembrane     317   339   Phd
                                            transmembrane     345   369   Phd
                                            transmembrane     374   395   Phd
                                            transmembrane     400   424   Phd

TDE0803   hypothetical protein              transmembrane     9     26    Phd
                                            transmembrane     320   337   Phd

TDE0811   probable cation efflux pump       transmembrane     20    38    Phd
          (multidrug resistance protein)
                                            transmembrane     58    80    Phd
                                            transmembrane     101   118   Phd
                                            transmembrane     142   159   Phd
                                            transmembrane     173   196   Phd
                                            transmembrane     201   218   Phd
                                            transmembrane     237   260   Phd
                                            transmembrane     279   303   Phd
                                            transmembrane     320   344   Phd
                                            transmembrane     360   381   Phd
                                            transmembrane     390   407   Phd
                                            transmembrane     412   436   Phd

TDE0812   ABC-type multidrug/protein/lipid  transmembrane     9     26    Phd
          transport system, ATPase
          component
                                            transmembrane     51    69    Phd
                                            transmembrane     136   160   Phd
                                            transmembrane     237   256   Phd
                                            transmembrane     267   284   Phd

TDE0813   ABC-type multidrug/protein/lipid  transmembrane     14    31    Phd
          transport system, ATPase
          component
                                            transmembrane     47    64    Phd
                                            transmembrane     140   164   Phd
                                            transmembrane     240   257   Phd

TDE0815   possible transporter (short-      transmembrane     15    32    Phd
          chain fatty acids transporter)
                                            transmembrane     69    89    Phd
                                            transmembrane     118   142   Phd
                                            transmembrane     157   174   Phd
                                            transmembrane     194   211   Phd
                                            transmembrane     251   273   Phd
                                            transmembrane     278   296   Phd
                                            transmembrane     309   326   Phd
                                            transmembrane     331   348   Phd
                                            transmembrane     356   373   Phd
                                            transmembrane     378   397   Phd
                                            transmembrane     408   425   Phd
                                            transmembrane     436   454   Phd

TDE0818   ABC transporter, ATP-binding      transmembrane     26    43    Phd
          protein
                                            transmembrane     58    75    Phd
                                            transmembrane     138   162   Phd
                                            transmembrane     167   184   Phd
                                            transmembrane     245   262   Phd
                                            transmembrane     267   284   Phd

TDE0819   ABC transporter, ATP-             transmembrane     25    45    Phd
          binding/permease protein
                                            transmembrane     60    77    Phd
                                            transmembrane     140   164   Phd
                                            transmembrane     245   262   Phd
                                            transmembrane     275   294   Phd

TDE0834   Na(+)-translocating NADH-quinone  transmembrane     11    28    Phd
          reductase, subunit D
                                            transmembrane     45    62    Phd
                                            transmembrane     69    86    Phd
                                            transmembrane     100   120   Phd
                                            transmembrane     133   150   Phd
                                            transmembrane     167   184   Phd

TDE0835   Na(+)-translocating NADH-quinone  transmembrane     14    31    Phd
          reductase, subunit E
                                            transmembrane     36    56    Phd
                                            transmembrane     65    84    Phd
                                            transmembrane     93    111   Phd
                                            transmembrane     134   151   Phd
                                            transmembrane     170   188   Phd

TDE0836   conserved hypothetical protein    transmembrane     12    29    Phd
          (possible nitrogen fixation
          protein)
                                            transmembrane     89    106   Phd
                                            transmembrane     153   170   Phd

TDE0837   Na(+)-translocating NADH-quinone  transmembrane     30    54    Phd
          reductase, subunit B
                                            transmembrane     59    76    Phd
                                            transmembrane     84    108   Phd
                                            transmembrane     124   141   Phd
                                            transmembrane     204   221   Phd
                                            transmembrane     234   256   Phd
                                            transmembrane     280   297   Phd
                                            transmembrane     302   319   Phd

TDE0840   Treponema-specific protein,       transmembrane     6     23    Phd
          uncharacterized

TDE0849   conserved hypothetical protein    transmembrane     1     21    Phd
          (possible transporter)
                                            transmembrane     32    49    Phd
                                            transmembrane     62    80    Phd
                                            transmembrane     102   119   Phd
                                            transmembrane     148   172   Phd
                                            transmembrane     177   194   Phd

TDE0850   methyl-accepting chemotaxis       transmembrane     35    52    Phd
          protein
                                            transmembrane     316   333   Phd

TDE0850.1 hypothetical protein              transmembrane     1     21    Phd
                                            transmembrane     32    51    Phd

TDE0851   hypothetical protein              transmembrane     7     30    Phd

TDE0858   hypothetical protein              transmembrane     60    77    Phd

TDE0863   Mg(2+) transport ATPase           transmembrane     9     26    Phd
                                            transmembrane     41    58    Phd
                                            transmembrane     78    97    Phd
                                            transmembrane     102   126   Phd

TDE0866   conserved hypothetical protein    transmembrane     10    27    Phd
          (heat shock protein)
                                            transmembrane     43    66    Phd
                                            transmembrane     80    97    Phd
                                            transmembrane     158   179   Phd
                                            transmembrane     184   201   Phd
                                            transmembrane     216   240   Phd

TDE0867   hypothetical protein              transmembrane     13    30    Phd
                                            transmembrane     50    70    Phd
                                            transmembrane     91    108   Phd
                                            transmembrane     500   517   Phd
                                            transmembrane     539   558   Phd
                                            transmembrane     563   582   Phd

TDE0869   conserved hypothetical protein    transmembrane     6     23    Phd
          (possible membrane protein)
                                            transmembrane     124   141   Phd
                                            transmembrane     152   176   Phd
                                            transmembrane     181   198   Phd
                                            transmembrane     203   220   Phd
                                            transmembrane     248   266   Phd
                                            transmembrane     308   327   Phd
                                            transmembrane     338   362   Phd

TDE0880   nicotinate-nucleotide-            transmembrane     245   269   Phd
          dimethylbenzimidazole
          phosphoribosyltransferase

TDE0889   hypothetical protein              transmembrane     104   121   Phd
                                            transmembrane     152   169   Phd

TDE0892   ABC transporter, integral         transmembrane     31    49    Phd
          membrane protein
                                            transmembrane     67    84    Phd
                                            transmembrane     117   134   Phd
                                            transmembrane     139   163   Phd
                                            transmembrane     168   185   Phd
                                            transmembrane     199   216   Phd
                                            transmembrane     221   245   Phd

TDE0894   ABC transporter, integral         transmembrane     24    42    Phd
          membrane protein
                                            transmembrane     57    74    Phd
                                            transmembrane     112   136   Phd
                                            transmembrane     141   165   Phd
                                            transmembrane     184   204   Phd
                                            transmembrane     229   251   Phd

TDE0896   export ABC transporter            transmembrane     28    45    Phd
                                            transmembrane     64    81    Phd
                                            transmembrane     145   169   Phd
                                            transmembrane     252   269   Phd
                                            transmembrane     279   296   Phd

TDE0897   probable transmembrane ABC        transmembrane     30    47    Phd
          transporter, ATP-binding protein
                                            transmembrane     61    78    Phd
                                            transmembrane     133   150   Phd
                                            transmembrane     155   179   Phd
                                            transmembrane     252   271   Phd
                                            transmembrane     279   297   Phd

TDE0898   conserved hypothetical protein    transmembrane     16    33    Phd
                                            transmembrane     38    62    Phd
                                            transmembrane     67    91    Phd
                                            transmembrane     115   134   Phd
                                            transmembrane     161   179   Phd

TDE0899   conserved hypothetical protein    transmembrane     19    43    Phd
          (possible cobalt permease)
                                            transmembrane     57    80    Phd
                                            transmembrane     85    102   Phd
                                            transmembrane     120   137   Phd
                                            transmembrane     151   175   Phd
                                            transmembrane     191   208   Phd
                                            transmembrane     214   231   Phd

TDE0902   conserved hypothetical protein    transmembrane     9     26    Phd

TDE0905   ABC-type cobalt transport         transmembrane     17    41    Phd
          system, permease component
                                            transmembrane     46    70    Phd
                                            transmembrane     83    100   Phd
                                            transmembrane     128   152   Phd
                                            transmembrane     166   183   Phd
                                            transmembrane     218   235   Phd

TDE0907   conserved hypothetical protein    transmembrane     18    36    Phd
                                            transmembrane     41    62    Phd
                                            transmembrane     84    105   Phd
                                            transmembrane     120   137   Phd
                                            transmembrane     166   185   Phd

TDE0908   ABC transporter, ATP-binding      transmembrane     55    72    Phd
          protein
                                            transmembrane     136   153   Phd
                                            transmembrane     158   175   Phd
                                            transmembrane     241   258   Phd
                                            transmembrane     266   283   Phd

TDE0916   export ABC transporter            transmembrane     27    44    Phd
                                            transmembrane     66    83    Phd
                                            transmembrane     149   173   Phd
                                            transmembrane     259   283   Phd
                                            transmembrane     288   305   Phd

TDE0917   hypothetical protein              transmembrane     8     25    Phd

TDE0918   hypothetical protein              transmembrane     162   180   Phd
                                            transmembrane     188   205   Phd

TDE0921   ABC transporter, ATP-binding      transmembrane     27    46    Phd
          protein
                                            transmembrane     69    86    Phd
                                            transmembrane     144   167   Phd
                                            transmembrane     172   189   Phd
                                            transmembrane     255   276   Phd
                                            transmembrane     281   298   Phd

TDE0922   ABC transporter, ATP-binding      transmembrane     58    76    Phd
          protein
                                            transmembrane     147   171   Phd
                                            transmembrane     250   267   Phd
                                            transmembrane     275   292   Phd

TDE0923   ABC transporter, ATP-binding      transmembrane     23    40    Phd
          protein
                                            transmembrane     58    75    Phd
                                            transmembrane     142   166   Phd
                                            transmembrane     245   266   Phd
                                            transmembrane     275   299   Phd

TDE0924   ABC transporter, ATP-             transmembrane     53    74    Phd
          binding/permease protein
                                            transmembrane     96    113   Phd
                                            transmembrane     180   204   Phd
                                            transmembrane     283   301   Phd
                                            transmembrane     310   327   Phd

TDE0926   phosphonate ABC transporter,      transmembrane     18    35    Phd
          permease protein
                                            transmembrane     77    101   Phd
                                            transmembrane     118   142   Phd
                                            transmembrane     147   164   Phd
                                            transmembrane     183   204   Phd
                                            transmembrane     212   230   Phd
                                            transmembrane     242   259   Phd

TDE0927   phosphonate ABC transporter,      transmembrane     40    58    Phd
          permease protein
                                            transmembrane     63    80    Phd
                                            transmembrane     97    121   Phd
                                            transmembrane     136   159   Phd
                                            transmembrane     164   181   Phd
                                            transmembrane     206   224   Phd
                                            transmembrane     240   257   Phd
                                            transmembrane     262   279   Phd

TDE0930   conserved hypothetical protein    transmembrane     10    27    Phd
          (YitT family)
                                            transmembrane     53    70    Phd
                                            transmembrane     81    99    Phd
                                            transmembrane     105   123   Phd
                                            transmembrane     157   181   Phd

TDE0931   damage-inducible protein;         transmembrane     20    37    Phd
          possible cation efflux pump
          (multidrug resistance protein)
                                            transmembrane     49    73    Phd
                                            transmembrane     94    117   Phd
                                            transmembrane     132   151   Phd
                                            transmembrane     165   189   Phd
                                            transmembrane     194   212   Phd
                                            transmembrane     248   266   Phd
                                            transmembrane     278   295   Phd
                                            transmembrane     320   340   Phd
                                            transmembrane     351   370   Phd
                                            transmembrane     384   401   Phd
                                            transmembrane     412   429   Phd

TDE0932   adenylate cyclase                 transmembrane     19    36    Phd
                                            transmembrane     561   578   Phd
                                            transmembrane     589   613   Phd
                                            transmembrane     618   635   Phd

TDE0942   long-chain-fatty-acid CoA ligase  transmembrane     93    110   Phd
                                            transmembrane     232   249   Phd
                                            transmembrane     271   288   Phd
                                            transmembrane     293   310   Phd

TDE0945   conserved hypothetical protein    transmembrane     24    46    Phd

TDE0950   hypothetical protein              transmembrane     24    41    Phd

TDE0953   sugar ABC transporter, permease   transmembrane     11    28    Phd
          protein (possible rbsC)
                                            transmembrane     48    68    Phd
                                            transmembrane     79    96    Phd
                                            transmembrane     105   124   Phd
                                            transmembrane     135   152   Phd
                                            transmembrane     184   204   Phd
                                            transmembrane     231   255   Phd
                                            transmembrane     261   285   Phd
                                            transmembrane     308   332   Phd

TDE0954   sugar ABC transporter, permease   transmembrane     11    28    Phd
          protein
                                            transmembrane     50    74    Phd
                                            transmembrane     87    105   Phd
                                            transmembrane     132   149   Phd
                                            transmembrane     179   199   Phd
                                            transmembrane     218   242   Phd
                                            transmembrane     253   270   Phd

TDE0955   probable lipoprotein (lemA        transmembrane     9     27    Phd
          protein)

TDE0956   conserved hypothetical protein    transmembrane     13    30    Phd
          (glycine rich protein)
                                            transmembrane     187   208   Phd

TDE0959   Treponema-specific protein,       transmembrane     13    31    Phd
          uncharacterized

TDE0962   Treponema-specific protein,       transmembrane     213   231   Phd
          uncharacterized
                                            transmembrane     253   271   Phd
                                            transmembrane     292   309   Phd
                                            transmembrane     324   348   Phd
                                            transmembrane     368   386   Phd
                                            transmembrane     400   417   Phd
                                            transmembrane     440   457   Phd
                                            transmembrane     528   545   Phd

TDE0969   probable periplasmic protease     transmembrane     10    27    Phd

TDE0970   hypothetical protein              transmembrane     25    42    Phd
                                            transmembrane     54    71    Phd
                                            transmembrane     81    98    Phd

TDE0976.1 hypothetical protein              transmembrane     5     22    Phd

TDE0979   D-alanyl-D-alanine                transmembrane     13    32    Phd
          carboxypeptidase

TDE0984   ABC related oligopeptide          transmembrane     47    64    Phd
          transporter permease (oppC
          homolog)
                                            transmembrane     290   314   Phd
                                            transmembrane     339   363   Phd
                                            transmembrane     402   424   Phd
                                            transmembrane     465   482   Phd

TDE0995   hypothetical protein              transmembrane     15    39    Phd

TDE0999   formate/nitrite family of         transmembrane     31    48    Phd
          transporters
                                            transmembrane     71    95    Phd
                                            transmembrane     112   134   Phd
                                            transmembrane     148   172   Phd
                                            transmembrane     192   211   Phd
                                            transmembrane     216   233   Phd
                                            transmembrane     250   269   Phd

TDE1002   conserved hypothetical protein    transmembrane     16    35    Phd
                                            transmembrane     59    76    Phd
                                            transmembrane     91    115   Phd
                                            transmembrane     141   158   Phd
                                            transmembrane     171   191   Phd
                                            transmembrane     202   220   Phd

TDE1009   methyl-accepting chemotaxis       transmembrane     14    31    Phd
          protein
                                            transmembrane     293   312   Phd

TDE1014   hypothetical protein              transmembrane     7     24    Phd
                                            transmembrane     35    59    Phd
                                            transmembrane     64    81    Phd
                                            transmembrane     88    109   Phd

TDE1018   Treponema-specific protein,       transmembrane     9     26    Phd
          uncharacterized
                                            transmembrane     49    73    Phd
                                            transmembrane     82    103   Phd
                                            transmembrane     108   132   Phd

TDE1019   C4-dicarboxylate transport        transmembrane     9     26    Phd
          system permease large protein
                                            transmembrane     40    57    Phd
                                            transmembrane     83    100   Phd
                                            transmembrane     115   132   Phd
                                            transmembrane     144   162   Phd
                                            transmembrane     196   220   Phd
                                            transmembrane     249   266   Phd
                                            transmembrane     286   310   Phd
                                            transmembrane     342   360   Phd
                                            transmembrane     368   385   Phd
                                            transmembrane     413   431   Phd
                                            transmembrane     436   453   Phd
                                            transmembrane     463   487   Phd
                                            transmembrane     501   525   Phd
                                            transmembrane     551   575   Phd
                                            transmembrane     589   606   Phd

TDE1021   Treponema-specific protein,       transmembrane     6     23    Phd
          uncharacterized

TDE1034   magnesium and cobalt transporter  transmembrane     251   269   Phd
                                            transmembrane     284   301   Phd

TDE1036   conserved hypothetical protein    transmembrane     93    112   Phd
                                            transmembrane     117   134   Phd
                                            transmembrane     168   185   Phd
                                            transmembrane     190   207   Phd

TDE1037   conserved hypothetical protein    transmembrane     7     24    Phd

TDE1039   riboflavin kinase/FMN             transmembrane     103   127   Phd
          adenylyltransferase

TDE1043   conserved hypothetical protein    transmembrane     17    38    Phd
          (possible permease)
                                            transmembrane     60    82    Phd
                                            transmembrane     98    122   Phd
                                            transmembrane     293   310   Phd
                                            transmembrane     323   340   Phd
                                            transmembrane     352   369   Phd

TDE1044   conserved hypothetical protein    transmembrane     14    34    Phd
          (possible permease)
                                            transmembrane     54    74    Phd
                                            transmembrane     93    117   Phd
                                            transmembrane     278   295   Phd
                                            transmembrane     301   321   Phd
                                            transmembrane     334   351   Phd

TDE1045   conserved hypothetical protein    transmembrane     6     30    Phd
                                            transmembrane     83    107   Phd

TDE1054   methyl-accepting chemotaxis       transmembrane     12    29    Phd
          protein
                                            transmembrane     282   304   Phd

TDE1055   Na+ driven multidrug efflux pump  transmembrane     17    35    Phd
                                            transmembrane     42    59    Phd
                                            transmembrane     64    82    Phd
                                            transmembrane     95    119   Phd
                                            transmembrane     135   154   Phd
                                            transmembrane     171   191   Phd
                                            transmembrane     196   216   Phd
                                            transmembrane     221   238   Phd
                                            transmembrane     243   261   Phd
                                            transmembrane     278   297   Phd
                                            transmembrane     318   338   Phd
                                            transmembrane     362   380   Phd
                                            transmembrane     394   413   Phd
                                            transmembrane     418   437   Phd

TDE1059   hypothetical protein              transmembrane     17    34    Phd

TDE1061   ABC transporter, ATP-binding      transmembrane     25    42    Phd
          protein (multidrug resistance
          protein)
                                            transmembrane     49    66    Phd
                                            transmembrane     137   161   Phd
                                            transmembrane     249   266   Phd
                                            transmembrane     273   290   Phd

TDE1062   ABC transporter, ATP-binding      transmembrane     42    60    Phd
          protein
                                            transmembrane     76    93    Phd
                                            transmembrane     160   177   Phd
                                            transmembrane     190   208   Phd
                                            transmembrane     287   304   Phd

TDE1066   hypothetical protein              transmembrane     44    64    Phd

TDE1069   ABC related oligopeptide          transmembrane     34    52    Phd
          transporter permease
                                            transmembrane     100   118   Phd
                                            transmembrane     131   151   Phd
                                            transmembrane     164   181   Phd
                                            transmembrane     219   236   Phd
                                            transmembrane     272   290   Phd

TDE1070   ABC related oligopeptide          transmembrane     20    44    Phd
          transporter permease
                                            transmembrane     127   145   Phd
                                            transmembrane     160   184   Phd
                                            transmembrane     206   223   Phd
                                            transmembrane     262   279   Phd
                                            transmembrane     284   301   Phd
                                            transmembrane     309   327   Phd

TDE1073   ABC related oligopeptide          transmembrane     13    30    Phd
          transporter permease (OppB
          homolog)
                                            transmembrane     121   138   Phd
                                            transmembrane     162   185   Phd
                                            transmembrane     211   228   Phd
                                            transmembrane     268   286   Phd
                                            transmembrane     291   308   Phd
                                            transmembrane     316   333   Phd

TDE1074   ABC related oligopeptide          transmembrane     22    39    Phd
          transporter permease (oppC
          homolog)
                                            transmembrane     258   282   Phd
                                            transmembrane     297   321   Phd
                                            transmembrane     326   343   Phd
                                            transmembrane     371   394   Phd
                                            transmembrane     430   451   Phd

TDE1077   multidrug resistance protein      transmembrane     16    33    Phd
          (possible permease)
                                            transmembrane     40    59    Phd
                                            transmembrane     81    105   Phd
                                            transmembrane     138   155   Phd
                                            transmembrane     160   180   Phd
                                            transmembrane     215   232   Phd
                                            transmembrane     241   259   Phd
                                            transmembrane     278   301   Phd
                                            transmembrane     308   329   Phd
                                            transmembrane     346   367   Phd
                                            transmembrane     372   390   Phd

TDE1092   conserved hypothetical protein    transmembrane     561   578   Phd
          (possible TPR-repeat-containing
          protein)

TDE1095   alanine racemase                  transmembrane     43    61    Phd
                                            transmembrane     69    86    Phd

TDE1108.1 hypothetical protein              transmembrane     162   183   Phd

TDE1111   probable glutamate transporter    transmembrane     9     27    Phd
                                            transmembrane     33    56    Phd
                                            transmembrane     71    95    Phd
                                            transmembrane     134   153   Phd
                                            transmembrane     171   195   Phd
                                            transmembrane     212   230   Phd
                                            transmembrane     243   260   Phd
                                            transmembrane     291   314   Phd
                                            transmembrane     326   350   Phd
                                            transmembrane     370   391   Phd

TDE1123   sigma-24 factor sigB regulation   transmembrane     13    30    Phd
          protein
                                            transmembrane     48    67    Phd
                                            transmembrane     72    89    Phd
                                            transmembrane     261   278   Phd
                                            transmembrane     381   398   Phd

TDE1125   Treponema-specific protein,       transmembrane     6     25    Phd
          uncharacterized

TDE1127   TPR-domain containing protein     transmembrane     10    27    Phd

TDE1132   chorismate synthase               transmembrane     226   243   Phd
                                            transmembrane     336   353   Phd

TDE1133   hypothetical protein              transmembrane     7     24    Phd
                                            transmembrane     32    49    Phd
                                            transmembrane     61    85    Phd

TDE1134   hypothetical protein              transmembrane     13    33    Phd

TDE1137   hypothetical protein              transmembrane     5     22    Phd
                                            transmembrane     81    98    Phd

TDE1142   probable exonuclease              transmembrane     217   234   Phd

TDE1161   hypothetical protein              transmembrane     9     26    Phd

TDE1172   hypothetical protein              transmembrane     13    31    Phd
                                            transmembrane     36    53    Phd

TDE1179   ferrichrome ABC transporter,      transmembrane     8     25    Phd
          permease protein
                                            transmembrane     55    72    Phd
                                            transmembrane     91    108   Phd
                                            transmembrane     113   133   Phd
                                            transmembrane     141   163   Phd
                                            transmembrane     190   210   Phd
                                            transmembrane     232   256   Phd
                                            transmembrane     275   292   Phd
                                            transmembrane     297   315   Phd

TDE1188   nicotinamide nucleotide           transmembrane     37    54    Phd
          transhydrogenase, beta subunit
                                            transmembrane     59    76    Phd
                                            transmembrane     92    109   Phd
                                            transmembrane     114   134   Phd
                                            transmembrane     164   188   Phd
                                            transmembrane     193   210   Phd
                                            transmembrane     226   243   Phd

TDE1188.1 nicotinamide nucleotide           transmembrane     1     21    Phd
          transhydrogenase, alpha subunit
                                            transmembrane     38    56    Phd
                                            transmembrane     61    78    Phd

TDE1193   hypothetical protein              transmembrane     19    40    Phd

TDE1194   conserved hypothetical protein    transmembrane     1     19    Phd
                                            transmembrane     133   151   Phd
                                            transmembrane     166   183   Phd
                                            transmembrane     195   212   Phd
                                            transmembrane     220   238   Phd
                                            transmembrane     263   282   Phd
                                            transmembrane     293   310   Phd
                                            transmembrane     317   334   Phd
                                            transmembrane     356   373   Phd
                                            transmembrane     382   399   Phd
                                            transmembrane     407   424   Phd
                                            transmembrane     431   448   Phd
                                            transmembrane     457   474   Phd
                                            transmembrane     484   501   Phd
                                            transmembrane     515   532   Phd
                                            transmembrane     538   555   Phd
                                            transmembrane     569   586   Phd
                                            transmembrane     595   612   Phd
                                            transmembrane     629   646   Phd
                                            transmembrane     651   668   Phd
                                            transmembrane     683   700   Phd
                                            transmembrane     712   736   Phd
                                            transmembrane     741   758   Phd
                                            transmembrane     766   783   Phd
                                            transmembrane     796   815   Phd
                                            transmembrane     820   837   Phd

TDE1196   hypothetical protein              transmembrane     13    30    Phd

TDE1199   conserved hypothetical protein    transmembrane     6     23    Phd

TDE1200   UDP-N-acetylmuramoylalanyl-D-     transmembrane     201   218   Phd
          glutamyl-2, 6-diaminopimelate-D-
          alanyl-D-alanyl ligase
                                            transmembrane     296   313   Phd

TDE1201   cell division protein             transmembrane     21    38    Phd
                                            transmembrane     64    88    Phd
                                            transmembrane     93    110   Phd
                                            transmembrane     117   134   Phd
                                            transmembrane     154   174   Phd
                                            transmembrane     184   208   Phd
                                            transmembrane     271   295   Phd
                                            transmembrane     313   330   Phd
                                            transmembrane     347   365   Phd

TDE1202   cell division protein             transmembrane     38    62    Phd
                                            transmembrane     155   172   Phd

TDE1215   flagellar basal-body M ring       transmembrane     25    42    Phd
          protein
                                            transmembrane     474   491   Phd

TDE1223   zinc ABC transporter, permease    transmembrane     6     24    Phd
          protein
                                            transmembrane     37    61    Phd
                                            transmembrane     66    83    Phd
                                            transmembrane     88    105   Phd
                                            transmembrane     118   135   Phd
                                            transmembrane     140   157   Phd
                                            transmembrane     171   188   Phd
                                            transmembrane     193   217   Phd
                                            transmembrane     222   246   Phd
                                            transmembrane     253   270   Phd

TDE1224   high-affinity zinc uptake system  transmembrane     17    34    Phd
          membrane protein (ABC
          transporter, permease protein)
                                            transmembrane     44    61    Phd
                                            transmembrane     66    85    Phd
                                            transmembrane     100   117   Phd
                                            transmembrane     138   160   Phd
                                            transmembrane     187   211   Phd
                                            transmembrane     228   245   Phd
                                            transmembrane     260   278   Phd

TDE1227   conserved hypothetical protein    transmembrane     23    41    Phd
          (possible surface antigen gene)

TDE1238   Treponema-specific protein,       transmembrane     6     23    Phd
          uncharacterized
                                            transmembrane     55    73    Phd

TDE1239   hypothetical protein              transmembrane     13    30    Phd

TDE1241   probable membrane-associated HD   transmembrane     27    44    Phd
          superfamily hydrolase
                                            transmembrane     313   330   Phd
                                            transmembrane     347   369   Phd
                                            transmembrane     380   404   Phd
                                            transmembrane     409   428   Phd
                                            transmembrane     448   465   Phd
                                            transmembrane     479   496   Phd

TDE1249   hypothetical protein              transmembrane     121   144   Phd

TDE1250   von Willebrand factor type A      transmembrane     8     26    Phd
          domain protein
                                            transmembrane     58    76    Phd
                                            transmembrane     133   150   Phd
                                            transmembrane     214   231   Phd
                                            transmembrane     306   323   Phd

TDE1251   von Willebrand factor type A      transmembrane     9     26    Phd
          domain protein
                                            transmembrane     51    69    Phd
                                            transmembrane     148   165   Phd
                                            transmembrane     259   276   Phd
                                            transmembrane     300   317   Phd

TDE1253   hypothetical protein              transmembrane     15    32    Phd
                                            transmembrane     358   378   Phd
                                            transmembrane     386   404   Phd

TDE1257   Treponema-specific protein,       transmembrane     7     27    Phd
          uncharacterized
                                            transmembrane     43    61    Phd
                                            transmembrane     158   175   Phd

TDE1259   Na(+)-linked D-alanine glycine    transmembrane     18    38    Phd
          permease
                                            transmembrane     80    97    Phd
                                            transmembrane     102   119   Phd
                                            transmembrane     161   179   Phd
                                            transmembrane     198   216   Phd
                                            transmembrane     231   250   Phd
                                            transmembrane     255   272   Phd
                                            transmembrane     317   337   Phd
                                            transmembrane     368   391   Phd
                                            transmembrane     408   425   Phd
                                            transmembrane     437   454   Phd

TDE1261   choline-glycine betaine           transmembrane     27    44    Phd
          transporter
                                            transmembrane     61    80    Phd
                                            transmembrane     107   124   Phd
                                            transmembrane     155   172   Phd
                                            transmembrane     209   233   Phd
                                            transmembrane     241   260   Phd
                                            transmembrane     274   292   Phd
                                            transmembrane     334   351   Phd
                                            transmembrane     367   384   Phd
                                            transmembrane     418   439   Phd
                                            transmembrane     469   486   Phd
                                            transmembrane     494   511   Phd

TDE1262   hypothetical protein              transmembrane     20    37    Phd

TDE1274   ABC related oligopeptide          transmembrane     40    58    Phd
          transporter permease (oppC
          homolog)
                                            transmembrane     105   122   Phd
                                            transmembrane     135   159   Phd
                                            transmembrane     164   182   Phd
                                            transmembrane     204   228   Phd
                                            transmembrane     268   285   Phd

TDE1275   ABC related oligopeptide          transmembrane     13    31    Phd
          transporter permease (OppB
          homolog)
                                            transmembrane     61    78    Phd
                                            transmembrane     99    119   Phd
                                            transmembrane     138   160   Phd
                                            transmembrane     179   196   Phd
                                            transmembrane     238   255   Phd
                                            transmembrane     262   279   Phd
                                            transmembrane     286   303   Phd

TDE1284   methyl-accepting chemotaxis       transmembrane     24    45    Phd
          protein
                                            transmembrane     299   317   Phd

TDE1286   conserved hypothetical protein    transmembrane     10    27    Phd
          (possible TPR-repeat-containing
          proteins)

TDE1288   Abi, CAAX amino terminal          transmembrane     15    32    Phd
          protease family
                                            transmembrane     50    71    Phd
                                            transmembrane     84    108   Phd
                                            transmembrane     150   167   Phd
                                            transmembrane     182   202   Phd
                                            transmembrane     227   244   Phd
                                            transmembrane     249   267   Phd

TDE1292   probable Zn-dependent protease    transmembrane     236   255   Phd
          and inactivated homologs

TDE1303   hypothetical protein              transmembrane     21    43    Phd

TDE1310   inactivated probable Zn-          transmembrane     231   249   Phd
          dependent protease, PMBA
          ortholog

TDE1311   ABC-type multidrug/protein/lipid  transmembrane     16    33    Phd
          transport system, ATPase
          component
                                            transmembrane     46    63    Phd
                                            transmembrane     133   150   Phd
                                            transmembrane     155   172   Phd
                                            transmembrane     242   259   Phd
                                            transmembrane     264   281   Phd

TDE1314   penicillin-binding protein 3      transmembrane     15    32    Phd
                                            transmembrane     504   521   Phd

TDE1317   Treponema-specific protein,       transmembrane     11    28    Phd
          uncharacterized
                                            transmembrane     43    61    Phd
                                            transmembrane     83    100   Phd
                                            transmembrane     105   122   Phd
                                            transmembrane     137   157   Phd

TDE1318   hypothetical protein              transmembrane     1     18    Phd
                                            transmembrane     125   142   Phd

TDE1320   probable competence factor,       transmembrane     22    40    Phd
          ComEC/Rec2 family protein
                                            transmembrane     64    82    Phd
                                            transmembrane     234   252   Phd
                                            transmembrane     273   290   Phd
                                            transmembrane     304   321   Phd
                                            transmembrane     326   350   Phd
                                            transmembrane     370   387   Phd
                                            transmembrane     412   436   Phd
                                            transmembrane     441   465   Phd
                                            transmembrane     488   507   Phd

TDE1324   conserved hypothetical protein    transmembrane     6     23    Phd
          (probable signal peptide
          protein)

TDE1332   lambda CII stability-governing    transmembrane     16    33    Phd
          protein

TDE1333   lambda CII stability-governing    transmembrane     43    64    Phd
          protein

TDE1334   conserved hypothetical protein    transmembrane     18    35    Phd
          (possible flagellar protein
          flbB)
                                            transmembrane     40    57    Phd

TDE1335   alginate o-acetyltransferase      transmembrane     1     20    Phd
                                            transmembrane     38    61    Phd
                                            transmembrane     79    100   Phd
                                            transmembrane     125   144   Phd
                                            transmembrane     151   168   Phd
                                            transmembrane     203   225   Phd
                                            transmembrane     237   256   Phd
                                            transmembrane     261   278   Phd
                                            transmembrane     318   342   Phd
                                            transmembrane     388   405   Phd
                                            transmembrane     423   440   Phd
                                            transmembrane     459   478   Phd

TDE1336   conserved hypothetical protein    transmembrane     32    49    Phd
          (possible periplasmic protein)

TDE1348   conserved hypothetical protein    transmembrane     23    40    Phd
          (possible TPR-repeat-containing
          proteins)

TDE1350   rod shape-determining protein     transmembrane     15    33    Phd

TDE1351   rod shape-determining protein     transmembrane     12    36    Phd
                                            transmembrane     41    65    Phd
                                            transmembrane     70    90    Phd
                                            transmembrane     99    123   Phd
                                            transmembrane     139   158   Phd

TDE1353   rod shape-determining protein     transmembrane     14    31    Phd
          rodA
                                            transmembrane     48    65    Phd
                                            transmembrane     75    92    Phd
                                            transmembrane     108   125   Phd
                                            transmembrane     139   156   Phd
                                            transmembrane     162   186   Phd
                                            transmembrane     191   208   Phd
                                            transmembrane     220   241   Phd
                                            transmembrane     248   268   Phd
                                            transmembrane     342   361   Phd
                                            transmembrane     375   395   Phd
                                            transmembrane     400   424   Phd

TDE1360   conserved hypothetical protein    transmembrane     20    37    Phd
          (possible uracil permease)
                                            transmembrane     52    76    Phd
                                            transmembrane     100   117   Phd
                                            transmembrane     133   150   Phd
                                            transmembrane     170   194   Phd
                                            transmembrane     199   216   Phd
                                            transmembrane     231   255   Phd
                                            transmembrane     288   305   Phd
                                            transmembrane     324   348   Phd
                                            transmembrane     353   370   Phd
                                            transmembrane     383   403   Phd
                                            transmembrane     415   432   Phd

TDE1364   valyl-tRNA synthetase             transmembrane     500   517   Phd

TDE1366   hypothetical protein              transmembrane     17    34    Phd
                                            transmembrane     39    56    Phd
                                            transmembrane     81    105   Phd
                                            transmembrane     129   146   Phd
                                            transmembrane     151   175   Phd

TDE1376   hypothetical protein              transmembrane     1     22    Phd
                                            transmembrane     66    86    Phd
                                            transmembrane     93    113   Phd

TDE1379   conserved hypothetical protein    transmembrane     14    31    Phd
          (possible membrane protein)
                                            transmembrane     56    76    Phd
                                            transmembrane     94    112   Phd
                                            transmembrane     117   135   Phd
                                            transmembrane     140   157   Phd
                                            transmembrane     170   194   Phd

TDE1383   hypothetical protein              transmembrane     35    52    Phd
                                            transmembrane     63    80    Phd
                                            transmembrane     91    108   Phd
                                            transmembrane     124   144   Phd

TDE1384   cation transport ATPases          transmembrane     11    28    Phd
                                            transmembrane     33    52    Phd
                                            transmembrane     241   259   Phd
                                            transmembrane     281   298   Phd
                                            transmembrane     604   628   Phd

TDE1386   methyl-accepting chemotaxis       transmembrane     24    41    Phd
          protein, Mcp-2 related
                                            transmembrane     48    65    Phd
                                            transmembrane     96    114   Phd
                                            transmembrane     125   142   Phd
                                            transmembrane     171   188   Phd
                                            transmembrane     208   228   Phd

TDE1388   conserved hypothetical protein    transmembrane     16    36    Phd
                                            transmembrane     58    75    Phd
                                            transmembrane     80    97    Phd

TDE1389   hypothetical protein              transmembrane     14    33    Phd
                                            transmembrane     141   159   Phd
                                            transmembrane     173   197   Phd
                                            transmembrane     226   250   Phd
                                            transmembrane     301   320   Phd
                                            transmembrane     461   478   Phd

TDE1391   Na(+)-translocating NADH-quinone  transmembrane     20    42    Phd
          reductase, subunit B
                                            transmembrane     47    65    Phd
                                            transmembrane     79    103   Phd
                                            transmembrane     108   132   Phd
                                            transmembrane     175   194   Phd
                                            transmembrane     209   233   Phd
                                            transmembrane     238   257   Phd
                                            transmembrane     262   279   Phd
                                            transmembrane     299   323   Phd

TDE1392   hypothetical protein              transmembrane     16    33    Phd
                                            transmembrane     126   143   Phd

TDE1393   Treponema-specific protein,       transmembrane     13    37    Phd
          uncharacterized
                                            transmembrane     56    73    Phd
                                            transmembrane     81    100   Phd
                                            transmembrane     122   146   Phd
                                            transmembrane     164   182   Phd

TDE1394   hypothetical protein              transmembrane     1     20    Phd
                                            transmembrane     36    53    Phd
                                            transmembrane     58    82    Phd
                                            transmembrane     99    116   Phd
                                            transmembrane     121   138   Phd
                                            transmembrane     157   174   Phd

TDE1396   hypothetical protein              transmembrane     1     20    Phd
                                            transmembrane     33    50    Phd
                                            transmembrane     67    86    Phd
                                            transmembrane     101   118   Phd

TDE1397   ATP-binding protein               transmembrane     21    38    Phd
                                            transmembrane     130   150   Phd
                                            transmembrane     155   172   Phd

TDE1399   prolipoprotein diacylglyceryl     transmembrane     23    40    Phd
          transferase
                                            transmembrane     68    85    Phd
                                            transmembrane     121   138   Phd
                                            transmembrane     143   160   Phd
                                            transmembrane     229   246   Phd
                                            transmembrane     251   268   Phd
                                            transmembrane     305   322   Phd

TDE1401   dedA-family integral membrane     transmembrane     13    33    Phd
          protein
                                            transmembrane     57    75    Phd
                                            transmembrane     110   127   Phd
                                            transmembrane     140   157   Phd
                                            transmembrane     171   189   Phd

TDE1412   conserved hypothetical protein    transmembrane     22    39    Phd
          (possible K efflux system,
          membrane domain)
                                            transmembrane     48    65    Phd
                                            transmembrane     73    90    Phd
                                            transmembrane     109   130   Phd
                                            transmembrane     135   152   Phd
                                            transmembrane     181   198   Phd
                                            transmembrane     214   232   Phd
                                            transmembrane     255   279   Phd
                                            transmembrane     296   313   Phd
                                            transmembrane     318   335   Phd
                                            transmembrane     387   404   Phd

TDE1416   polysaccharide ABC transporter,   transmembrane     53    70    Phd
          permease component
                                            transmembrane     85    102   Phd
                                            transmembrane     128   152   Phd
                                            transmembrane     164   186   Phd
                                            transmembrane     200   217   Phd
                                            transmembrane     230   247   Phd
                                            transmembrane     252   269   Phd

TDE1427   glycosyl transferase, group 1     transmembrane     432   451   Phd

TDE1428   hypothetical protein              transmembrane     420   437   Phd

TDE1431   glycosyl transferase, group 1     transmembrane     305   323   Phd
                                            transmembrane     431   448   Phd
                                            transmembrane     458   476   Phd

TDE1432   hypothetical protein              transmembrane     414   431   Phd

TDE1434   hypothetical protein              transmembrane     14    31    Phd
                                            transmembrane     55    72    Phd

TDE1436   inner membrane protein            transmembrane     10    34    Phd
                                            transmembrane     39    56    Phd
                                            transmembrane     105   122   Phd
                                            transmembrane     152   169   Phd
                                            transmembrane     186   205   Phd
                                            transmembrane     229   246   Phd
                                            transmembrane     259   276   Phd
                                            transmembrane     298   316   Phd
                                            transmembrane     340   357   Phd
                                            transmembrane     369   386   Phd
                                            transmembrane     414   431   Phd
                                            transmembrane     439   456   Phd

TDE1437   capsular polysaccharide           transmembrane     183   200   Phd
          biosynthsis protein
                                            transmembrane     258   275   Phd
                                            transmembrane     301   318   Phd

TDE1445   Treponema-specific protein,       transmembrane     14    32    Phd
          uncharacterized
                                            transmembrane     65    89    Phd
                                            transmembrane     95    119   Phd
                                            transmembrane     134   158   Phd
                                            transmembrane     163   187   Phd
                                            transmembrane     204   223   Phd
                                            transmembrane     245   269   Phd

TDE1446   hypothetical protein              transmembrane     1     18    Phd
                                            transmembrane     32    55    Phd
                                            transmembrane     67    85    Phd
                                            transmembrane     96    113   Phd
                                            transmembrane     128   147   Phd
                                            transmembrane     153   177   Phd
                                            transmembrane     186   203   Phd

TDE1454   galactose permease / lactose      transmembrane     21    45    Phd
          transport protein
                                            transmembrane     84    108   Phd
                                            transmembrane     113   130   Phd
                                            transmembrane     151   168   Phd
                                            transmembrane     180   199   Phd
                                            transmembrane     231   249   Phd
                                            transmembrane     269   286   Phd
                                            transmembrane     291   310   Phd
                                            transmembrane     315   339   Phd
                                            transmembrane     372   389   Phd
                                            transmembrane     408   425   Phd

TDE1456   Treponema-specific protein,       transmembrane     8     25    Phd
          uncharacterized
                                            transmembrane     146   170   Phd

TDE1461   Treponema-specific protein,       transmembrane     8     25    Phd
          uncharacterized
                                            transmembrane     119   136   Phd

TDE1463   Treponema-specific protein,       transmembrane     10    27    Phd
          uncharacterized
                                            transmembrane     192   209   Phd

TDE1465   signal peptidase IB               transmembrane     22    39    Phd

TDE1485   hypothetical protein              transmembrane     35    59    Phd
                                            transmembrane     64    81    Phd
                                            transmembrane     94    112   Phd
                                            transmembrane     121   138   Phd
                                            transmembrane     146   163   Phd
                                            transmembrane     168   188   Phd

TDE1489   hypothetical protein              transmembrane     7     24    Phd
                                            transmembrane     73    93    Phd
                                            transmembrane     118   137   Phd
                                            transmembrane     243   260   Phd

TDE1497   hypothetical protein              transmembrane     27    44    Phd

TDE1500   conserved hypothetical protein    transmembrane     13    37    Phd
          (possible poly-gamma-glutamic
          synthesis)

TDE1501.1 hypothetical protein              transmembrane     13    37    Phd
                                            transmembrane     42    59    Phd

TDE1505   conserved hypothetical protein    transmembrane     13    37    Phd
                                            transmembrane     42    65    Phd

TDE1506   L-serine dehydratase, alpha       transmembrane     94    111   Phd
          subunit
                                            transmembrane     116   133   Phd
                                            transmembrane     147   164   Phd
                                            transmembrane     200   217   Phd
                                            transmembrane     235   253   Phd

TDE1508   hypothetical protein              transmembrane     7     24    Phd
                                            transmembrane     46    63    Phd
                                            transmembrane     69    86    Phd
                                            transmembrane     104   121   Phd

TDE1510   high-affinity iron permease       transmembrane     7     24    Phd
                                            transmembrane     149   173   Phd
                                            transmembrane     188   210   Phd
                                            transmembrane     221   238   Phd
                                            transmembrane     266   284   Phd
                                            transmembrane     303   320   Phd
                                            transmembrane     325   345   Phd
                                            transmembrane     381   400   Phd

TDE1512   conserved hypothetical protein    transmembrane     13    30    Phd
          (possible integral membrane
          protein)
                                            transmembrane     46    64    Phd
                                            transmembrane     74    93    Phd
                                            transmembrane     111   133   Phd
                                            transmembrane     146   168   Phd
                                            transmembrane     181   200   Phd
                                            transmembrane     213   237   Phd
                                            transmembrane     276   293   Phd

TDE1514   ABC transporter, permease         transmembrane     18    35    Phd
          protein
                                            transmembrane     256   273   Phd
                                            transmembrane     300   319   Phd
                                            transmembrane     345   369   Phd
                                            transmembrane     385   407   Phd

TDE1515   ABC transporter, permease         transmembrane     19    36    Phd
          protein
                                            transmembrane     251   268   Phd
                                            transmembrane     305   324   Phd
                                            transmembrane     337   356   Phd

TDE1518   ABC transporter, permease         transmembrane     28    46    Phd
          protein
                                            transmembrane     112   129   Phd
                                            transmembrane     267   291   Phd
                                            transmembrane     326   350   Phd
                                            transmembrane     363   385   Phd

TDE1519   conserved hypothetical protein    transmembrane     9     26    Phd

TDE1523   apo-citrate lyase                 transmembrane     255   272   Phd
          phosphoribosyl/dephospho-CoA
          transferase (bifunctional
          enzyme)
                                            transmembrane     413   430   Phd

TDE1525   hypothetical protein              transmembrane     18    37    Phd
                                            transmembrane     42    59    Phd

TDE1527   hypothetical protein              transmembrane     13    30    Phd

TDE1528   hypothetical protein              transmembrane     19    36    Phd
                                            transmembrane     45    63    Phd
                                            transmembrane     82    99    Phd
                                            transmembrane     104   128   Phd
                                            transmembrane     147   169   Phd
                                            transmembrane     183   201   Phd
                                            transmembrane     221   245   Phd
                                            transmembrane     250   267   Phd
                                            transmembrane     293   310   Phd

TDE1534   hypothetical protein              transmembrane     96    113   Phd
                                            transmembrane     118   135   Phd

TDE1539   hypothetical protein              transmembrane     11    28    Phd
                                            transmembrane     152   169   Phd

TDE1543   conserved hypothetical protein    transmembrane     9     26    Phd
          (possible aminodeoxychorismate
          lyase)

TDE1544   glycosyltransferase (possible     transmembrane     96    113   Phd
          mannosyltransferase B)
                                            transmembrane     276   295   Phd

TDE1559   hypothetical protein              transmembrane     11    28    Phd
                                            transmembrane     148   165   Phd

TDE1561   hypothetical protein              transmembrane     8     28    Phd
                                            transmembrane     39    57    Phd
                                            transmembrane     62    84    Phd

TDE1562   hypothetical protein              transmembrane     1     19    Phd
                                            transmembrane     66    83    Phd

TDE1567   hypothetical protein              transmembrane     1     24    Phd
                                            transmembrane     70    87    Phd

TDE1568   hypothetical protein              transmembrane     27    44    Phd

TDE1570   hypothetical protein              transmembrane     13    34    Phd
                                            transmembrane     56    77    Phd
                                            transmembrane     94    112   Phd
                                            transmembrane     132   150   Phd

TDE1572   hypothetical protein              transmembrane     6     24    Phd
                                            transmembrane     93    110   Phd

TDE1580   Treponema-specific protein,       transmembrane     114   131   Phd
          uncharacterized

TDE1581   Treponema-specific protein,       transmembrane     23    47    Phd
          uncharacterized
                                            transmembrane     52    76    Phd
                                            transmembrane     81    105   Phd
                                            transmembrane     111   132   Phd

TDE1585   conserved hypothetical protein    transmembrane     13    30    Phd

TDE1586   conserved hypothetical protein    transmembrane     20    39    Phd
                                            transmembrane     44    62    Phd

TDE1596   conserved hypothetical protein    transmembrane     18    42    Phd
          (possible ABC-type Mn/Zn
          transport systems, ATPase
          component)
                                            transmembrane     68    92    Phd
                                            transmembrane     111   129   Phd
                                            transmembrane     158   176   Phd

TDE1597   possible ABC transporter          transmembrane     19    36    Phd
          permease for cobalt
                                            transmembrane     41    65    Phd
                                            transmembrane     78    97    Phd
                                            transmembrane     118   135   Phd
                                            transmembrane     165   182   Phd
                                            transmembrane     209   226   Phd

TDE1599   ABC transporter, ATP-binding      transmembrane     28    48    Phd
          protein
                                            transmembrane     53    70    Phd
                                            transmembrane     135   159   Phd
                                            transmembrane     164   181   Phd
                                            transmembrane     250   274   Phd
                                            transmembrane     279   296   Phd

TDE1600   ABC transporter, ATP-binding      transmembrane     31    48    Phd
          protein
                                            transmembrane     56    73    Phd
                                            transmembrane     147   164   Phd
                                            transmembrane     277   294   Phd

TDE1604   possible ABC transporter          transmembrane     18    42    Phd
          permease for cobalt
                                            transmembrane     64    88    Phd
                                            transmembrane     93    114   Phd
                                            transmembrane     164   181   Phd

TDE1605   hypothetical protein              transmembrane     12    36    Phd
                                            transmembrane     41    58    Phd
                                            transmembrane     65    89    Phd
                                            transmembrane     108   128   Phd
                                            transmembrane     154   173   Phd

TDE1615   Treponema-specific protein,       transmembrane     21    38    Phd
          uncharacterized
                                            transmembrane     56    73    Phd

TDE1616   phosphoglycerate dehydrogenase    transmembrane     101   118   Phd
                                            transmembrane     160   177   Phd

TDE1619   hypothetical protein              transmembrane     27    44    Phd
                                            transmembrane     50    67    Phd
                                            transmembrane     108   125   Phd

TDE1629   dihydrolipoamide dehydrogenase    transmembrane     131   148   Phd
          (glutathione oxidoreductase)
                                            transmembrane     166   183   Phd

TDE1639   conserved hypothetical protein    transmembrane     10    27    Phd

TDE1643   serine/threonine protein kinase   transmembrane     19    37    Phd

TDE1646   hypothetical protein              transmembrane     18    35    Phd

TDE1649   hypothetical protein              transmembrane     41    65    Phd
                                            transmembrane     88    105   Phd
                                            transmembrane     113   130   Phd
                                            transmembrane     150   168   Phd
                                            transmembrane     185   202   Phd

TDE1651   biotin synthesis bioY protein     transmembrane     13    31    Phd
                                            transmembrane     55    73    Phd
                                            transmembrane     90    107   Phd
                                            transmembrane     131   152   Phd
                                            transmembrane     171   188   Phd

TDE1652   ABC transporter, ATP-binding      transmembrane     24    41    Phd
          protein
                                            transmembrane     63    85    Phd
                                            transmembrane     145   169   Phd
                                            transmembrane     174   191   Phd
                                            transmembrane     260   279   Phd
                                            transmembrane     284   301   Phd

TDE1667   translation initiation factor     transmembrane     256   274   Phd
          EIF-2B, alpha subunit

TDE1668   cationic amino acid transporter   transmembrane     22    40    Phd
          related protein
                                            transmembrane     45    62    Phd
                                            transmembrane     87    111   Phd
                                            transmembrane     116   140   Phd
                                            transmembrane     146   166   Phd
                                            transmembrane     186   203   Phd
                                            transmembrane     224   243   Phd
                                            transmembrane     266   284   Phd
                                            transmembrane     289   306   Phd
                                            transmembrane     323   341   Phd
                                            transmembrane     346   363   Phd
                                            transmembrane     385   406   Phd
                                            transmembrane     412   429   Phd

TDE1674   hypothetical protein              transmembrane     26    43    Phd
                                            transmembrane     53    77    Phd
                                            transmembrane     88    111   Phd

TDE1679   V-type ATPase, subunit K          transmembrane     10    27    Phd
                                            transmembrane     47    64    Phd
                                            transmembrane     79    96    Phd
                                            transmembrane     118   135   Phd

TDE1684   adenine                           transmembrane     72    89    Phd
          phosphoribosyltransferase
                                            transmembrane     156   173   Phd

TDE1685   two-component sensor histidine    transmembrane     769   786   Phd
          kinase/response regulator
          protein (GGDEF family)

TDE1686   3-phosphoshikimate-1-             transmembrane     104   121   Phd
          carboxyvinyltransferase
                                            transmembrane     252   270   Phd
                                            transmembrane     327   344   Phd

TDE1688   conserved hypothetical protein    transmembrane     48    72    Phd
          (possible membrane protein)
                                            transmembrane     82    101   Phd
                                            transmembrane     134   151   Phd
                                            transmembrane     163   187   Phd
                                            transmembrane     201   218   Phd
                                            transmembrane     268   286   Phd
                                            transmembrane     348   365   Phd
                                            transmembrane     385   402   Phd
                                            transmembrane     411   428   Phd
                                            transmembrane     433   457   Phd
                                            transmembrane     462   480   Phd
                                            transmembrane     501   518   Phd
                                            transmembrane     523   547   Phd

TDE1708   apolipoprotein N-acyltransferase  transmembrane     8     25    Phd
                                            transmembrane     34    51    Phd
                                            transmembrane     64    88    Phd
                                            transmembrane     93    110   Phd
                                            transmembrane     115   132   Phd
                                            transmembrane     153   173   Phd
                                            transmembrane     198   215   Phd
                                            transmembrane     518   535   Phd

TDE1712   flagellar filament outer layer    transmembrane     10    30    Phd
          protein

TDE1713   hypothetical protein              transmembrane     9     26    Phd

TDE1714   N-acetylmuramoyl-L-alanine        transmembrane     11    28    Phd
          amidase

TDE1725   Treponema-specific protein,       transmembrane     54    71    Phd
          uncharacterized

TDE1731   hypothetical protein              transmembrane     24    48    Phd
                                            transmembrane     54    72    Phd
                                            transmembrane     87    104   Phd
                                            transmembrane     115   132   Phd
                                            transmembrane     166   183   Phd
                                            transmembrane     193   210   Phd
                                            transmembrane     247   267   Phd
                                            transmembrane     284   301   Phd
                                            transmembrane     313   332   Phd
                                            transmembrane     342   360   Phd
                                            transmembrane     389   406   Phd
                                            transmembrane     427   444   Phd

TDE1737   hypothetical protein              transmembrane     18    38    Phd
                                            transmembrane     43    65    Phd
                                            transmembrane     80    97    Phd
                                            transmembrane     102   120   Phd

TDE1741   penicillin-binding protein 1A     transmembrane     9     26    Phd

TDE1742   long-chain-fatty-acid CoA ligase  transmembrane     251   268   Phd
                                            transmembrane     345   362   Phd

TDE1743   chromate transport protein        transmembrane     6     24    Phd
                                            transmembrane     55    72    Phd
                                            transmembrane     77    94    Phd
                                            transmembrane     119   137   Phd
                                            transmembrane     150   174   Phd

TDE1744   chromate transport protein        transmembrane     15    32    Phd
                                            transmembrane     60    77    Phd
                                            transmembrane     86    108   Phd
                                            transmembrane     118   135   Phd
                                            transmembrane     156   174   Phd

TDE1746   transcriptional regulator         transmembrane     13    30    Phd

TDE1751.1 hypothetical protein              transmembrane     24    41    Phd
                                            transmembrane     92    109   Phd

TDE1756   hypothetical protein              transmembrane     7     31    Phd
                                            transmembrane     36    53    Phd
                                            transmembrane     129   147   Phd

TDE1758   hypothetical protein              transmembrane     13    30    Phd
                                            transmembrane     52    69    Phd
                                            transmembrane     159   183   Phd

TDE1765   hypothetical protein              transmembrane     1     18    Phd
                                            transmembrane     30    48    Phd
                                            transmembrane     53    77    Phd
                                            transmembrane     82    100   Phd

TDE1767   hypothetical protein              transmembrane     16    38    Phd

TDE1771   hypothetical protein              transmembrane     6     23    Phd
                                            transmembrane     45    63    Phd

TDE1773   hypothetical protein              transmembrane     7     24    Phd
                                            transmembrane     80    97    Phd

TDE1776.1 hypothetical protein              transmembrane     51    68    Phd

TDE1778   hypothetical protein              transmembrane     20    37    Phd

TDE1779   conserved hypothetical protein    transmembrane     363   380   Phd
                                            transmembrane     443   463   Phd

TDE1786   hypothetical protein              transmembrane     190   209   Phd
                                            transmembrane     251   268   Phd
                                            transmembrane     273   292   Phd

TDE1792   hypothetical protein              transmembrane     11    28    Phd
                                            transmembrane     198   216   Phd
                                            transmembrane     247   265   Phd

TDE1794   hypothetical protein              transmembrane     18    35    Phd
                                            transmembrane     60    77    Phd
                                            transmembrane     85    102   Phd
                                            transmembrane     250   267   Phd
                                            transmembrane     500   517   Phd
                                            transmembrane     547   564   Phd

TDE1799   hypothetical protein              transmembrane     62    79    Phd
                                            transmembrane     87    111   Phd
                                            transmembrane     116   133   Phd

TDE1802   hypothetical protein              transmembrane     12    34    Phd

TDE1809   hypothetical protein              transmembrane     5     22    Phd

TDE1814   hypothetical protein              transmembrane     11    28    Phd
                                            transmembrane     198   216   Phd
                                            transmembrane     247   265   Phd

TDE1815   hypothetical protein              transmembrane     8     25    Phd
                                            transmembrane     164   181   Phd

TDE1816   conserved hypothetical protein    transmembrane     289   306   Phd

TDE1834   hypothetical protein              transmembrane     20    37    Phd

TDE1835   hypothetical protein (possible    transmembrane     363   380   Phd
          dihydropteroate synthetase)
                                            transmembrane     443   463   Phd

TDE1842   hypothetical protein              transmembrane     12    34    Phd

TDE1849   hypothetical protein              transmembrane     9     26    Phd

TDE1850   conserved hypothetical protein    transmembrane     21    38    Phd
                                            transmembrane     301   324   Phd
                                            transmembrane     360   384   Phd
                                            transmembrane     402   421   Phd

TDE1851   hypothetical protein              transmembrane     23    40    Phd
                                            transmembrane     371   389   Phd
                                            transmembrane     423   446   Phd
                                            transmembrane     470   487   Phd

TDE1860   hypothetical protein              transmembrane     83    107   Phd
                                            transmembrane     112   136   Phd
                                            transmembrane     141   165   Phd

TDE1860.1 hypothetical protein              transmembrane     7     31    Phd
                                            transmembrane     36    60    Phd

TDE1870   conserved hypothetical protein    transmembrane     12    29    Phd
                                            transmembrane     47    65    Phd
                                            transmembrane     82    103   Phd
                                            transmembrane     133   150   Phd
                                            transmembrane     169   186   Phd
                                            transmembrane     191   208   Phd
                                            transmembrane     235   254   Phd

TDE1871   Abi, CAAX amino terminal          transmembrane     12    30    Phd
          protease family
                                            transmembrane     35    59    Phd
                                            transmembrane     69    93    Phd
                                            transmembrane     98    115   Phd
                                            transmembrane     145   162   Phd
                                            transmembrane     177   201   Phd
                                            transmembrane     218   235   Phd
                                            transmembrane     240   261   Phd

TDE1873   conserved hypothetical protein    transmembrane     11    28    Phd
                                            transmembrane     49    67    Phd
                                            transmembrane     78    102   Phd
                                            transmembrane     107   124   Phd
                                            transmembrane     144   161   Phd
                                            transmembrane     177   201   Phd
                                            transmembrane     220   237   Phd
                                            transmembrane     242   261   Phd

TDE1875   hypothetical protein              transmembrane     18    36    Phd
                                            transmembrane     42    63    Phd

TDE1876   UDP-N-acetyl-D-mannosamine acid   transmembrane     148   165   Phd
          transferase; teichoic acid
          biosynthesis protein
                                            transmembrane     217   237   Phd

TDE1883   permease                          transmembrane     17    34    Phd
                                            transmembrane     45    62    Phd
                                            transmembrane     78    95    Phd
                                            transmembrane     104   121   Phd
                                            transmembrane     132   149   Phd
                                            transmembrane     164   181   Phd
                                            transmembrane     191   208   Phd
                                            transmembrane     223   240   Phd
                                            transmembrane     253   270   Phd
                                            transmembrane     280   297   Phd

TDE1885   hypothetical protein              transmembrane     35    52    Phd

TDE1889   sodium-coupled branched-chain     transmembrane     10    27    Phd
          amino acid carrier protein
                                            transmembrane     41    58    Phd
                                            transmembrane     79    97    Phd
                                            transmembrane     115   134   Phd
                                            transmembrane     146   163   Phd
                                            transmembrane     191   208   Phd
                                            transmembrane     223   241   Phd
                                            transmembrane     274   292   Phd
                                            transmembrane     312   336   Phd
                                            transmembrane     341   359   Phd
                                            transmembrane     364   381   Phd
                                            transmembrane     423   441   Phd

TDE1894   polyferridoxin-related protein    transmembrane     5     22    Phd
                                            transmembrane     78    95    Phd

TDE1899   hypothetical protein              transmembrane     13    32    Phd

TDE1903   conserved hypothetical protein    transmembrane     21    45    Phd
                                            transmembrane     81    105   Phd
                                            transmembrane     110   134   Phd
                                            transmembrane     151   169   Phd
                                            transmembrane     184   201   Phd

TDE1905   hypothetical protein              transmembrane     18    35    Phd

TDE1908   conserved hypothetical protein    transmembrane     15    32    Phd
                                            transmembrane     199   216   Phd

TDE1909   conserved hypothetical protein    transmembrane     18    35    Phd
                                            transmembrane     44    68    Phd
                                            transmembrane     73    90    Phd

TDE1921   Treponema-specific protein,       transmembrane     5     22    Phd
          uncharacterized
                                            transmembrane     47    64    Phd
                                            transmembrane     69    87    Phd
                                            transmembrane     114   131   Phd

TDE1924   hypothetical protein              transmembrane     16    33    Phd

TDE1926   conserved hypothetical protein    transmembrane     20    37    Phd
          (possible Integral membrane
          protein)
                                            transmembrane     42    66    Phd
                                            transmembrane     71    95    Phd
                                            transmembrane     114   138   Phd
                                            transmembrane     143   161   Phd
                                            transmembrane     219   243   Phd
                                            transmembrane     256   280   Phd
                                            transmembrane     294   311   Phd

TDE1930   conserved hypothetical protein    transmembrane     10    27    Phd

TDE1935   hypothetical protein              transmembrane     8     25    Phd

TDE1939   hypothetical protein              transmembrane     1     20    Phd
                                            transmembrane     25    49    Phd
                                            transmembrane     66    89    Phd
                                            transmembrane     108   132   Phd
                                            transmembrane     137   154   Phd

TDE1941   hypothetical protein              transmembrane     57    74    Phd
                                            transmembrane     153   170   Phd

TDE1944   hypothetical protein              transmembrane     124   141   Phd

TDE1947   ABC transporter permease          transmembrane     6     23    Phd
                                            transmembrane     44    68    Phd
                                            transmembrane     73    91    Phd
                                            transmembrane     99    118   Phd
                                            transmembrane     143   167   Phd
                                            transmembrane     202   220   Phd
                                            transmembrane     233   257   Phd
                                            transmembrane     276   293   Phd

TDE1948   ABC transporter permease          transmembrane     20    41    Phd
                                            transmembrane     64    81    Phd
                                            transmembrane     104   128   Phd
                                            transmembrane     146   164   Phd
                                            transmembrane     200   219   Phd
                                            transmembrane     249   270   Phd
                                            transmembrane     290   312   Phd
                                            transmembrane     328   345   Phd

TDE1964   Treponema-specific protein,       transmembrane     48    65    Phd
          uncharacterized
                                            transmembrane     84    101   Phd
                                            transmembrane     106   123   Phd
                                            transmembrane     177   195   Phd
                                            transmembrane     207   227   Phd
                                            transmembrane     253   271   Phd
                                            transmembrane     290   307   Phd

TDE1965   Na+/H+ antiporter                 transmembrane     13    30    Phd
                                            transmembrane     40    57    Phd
                                            transmembrane     77    95    Phd
                                            transmembrane     105   126   Phd
                                            transmembrane     139   158   Phd
                                            transmembrane     178   195   Phd
                                            transmembrane     207   225   Phd
                                            transmembrane     245   269   Phd
                                            transmembrane     294   311   Phd
                                            transmembrane     317   334   Phd
                                            transmembrane     358   375   Phd
                                            transmembrane     380   399   Phd

TDE1966   periplasmic serine protease       transmembrane     12    29    Phd
          (Treponema specific)

TDE1971   probable DNA polymerase III,      transmembrane     230   247   Phd
          gamma and tau subunit
                                            transmembrane     298   315   Phd
                                            transmembrane     359   376   Phd

TDE1973   Treponema-specific protein,       transmembrane     9     27    Phd
          uncharacterized
                                            transmembrane     34    54    Phd
                                            transmembrane     63    85    Phd
                                            transmembrane     110   128   Phd
                                            transmembrane     133   150   Phd

TDE1974   UDP-N-glucosamine--N-             transmembrane     81    99    Phd
          acetylmuramyl-(pentapeptide)
                                            transmembrane     104   121   Phd

TDE1981   hypothetical protein              transmembrane     11    28    Phd
                                            transmembrane     43    60    Phd

TDE1982   hypothetical protein              transmembrane     31    48    Phd
                                            transmembrane     75    96    Phd
                                            transmembrane     106   123   Phd

TDE1985   conserved hypothetical protein    transmembrane     20    37    Phd

TDE1986   adenylate cyclase                 transmembrane     19    36    Phd
                                            transmembrane     300   317   Phd

TDE1989   lysophosphatidic acid             transmembrane     1     20    Phd
          acyltransferase
                                            transmembrane     40    57    Phd
                                            transmembrane     177   194   Phd

TDE2000   ABC transporter, ATP-binding      transmembrane     15    32    Phd
          protein
                                            transmembrane     44    61    Phd
                                            transmembrane     123   147   Phd
                                            transmembrane     152   169   Phd
                                            transmembrane     237   254   Phd
                                            transmembrane     259   276   Phd

TDE2006   conserved hypothetical protein    transmembrane     22    39    Phd
                                            transmembrane     245   269   Phd
                                            transmembrane     292   309   Phd
                                            transmembrane     336   353   Phd
                                            transmembrane     365   383   Phd
                                            transmembrane     426   443   Phd
                                            transmembrane     635   652   Phd
                                            transmembrane     657   674   Phd
                                            transmembrane     679   696   Phd
                                            transmembrane     729   746   Phd
                                            transmembrane     756   773   Phd

TDE2007   hypothetical protein              transmembrane     15    33    Phd
                                            transmembrane     52    70    Phd
                                            transmembrane     133   155   Phd
                                            transmembrane     160   177   Phd
                                            transmembrane     235   259   Phd
                                            transmembrane     264   281   Phd

TDE2008   ABC transporter, ATP-binding      transmembrane     35    52    Phd
          protein
                                            transmembrane     63    80    Phd
                                            transmembrane     135   152   Phd
                                            transmembrane     157   177   Phd
                                            transmembrane     252   269   Phd
                                            transmembrane     281   298   Phd

TDE2010   hypothetical protein              transmembrane     10    27    Phd
                                            transmembrane     61    78    Phd
                                            transmembrane     87    105   Phd
                                            transmembrane     143   165   Phd

TDE2012   hypothetical protein              transmembrane     13    30    Phd
                                            transmembrane     49    66    Phd
                                            transmembrane     83    102   Phd
                                            transmembrane     117   134   Phd
                                            transmembrane     156   176   Phd

TDE2013   hypothetical protein              transmembrane     9     26    Phd
                                            transmembrane     47    64    Phd
                                            transmembrane     94    111   Phd

TDE2014   conserved hypothetical protein    transmembrane     15    34    Phd

TDE2017   hypothetical protein              transmembrane     12    29    Phd
                                            transmembrane     39    56    Phd
                                            transmembrane     73    90    Phd
                                            transmembrane     95    117   Phd

TDE2022   conserved hypothetical protein    transmembrane     8     25    Phd
          (possible Rhs family protein)

TDE2026   hypothetical protein              transmembrane     17    35    Phd
                                            transmembrane     94    112   Phd
                                            transmembrane     129   146   Phd
                                            transmembrane     190   207   Phd
                                            transmembrane     212   232   Phd
                                            transmembrane     251   269   Phd
                                            transmembrane     275   292   Phd
                                            transmembrane     310   328   Phd

TDE2027   hypothetical protein              transmembrane     42    60    Phd
                                            transmembrane     69    86    Phd

TDE2039   conserved hypothetical protein    transmembrane     32    50    Phd
          (possible ABC transporter,
          permease protein)
                                            transmembrane     284   307   Phd
                                            transmembrane     319   336   Phd
                                            transmembrane     341   361   Phd
                                            transmembrane     366   383   Phd
                                            transmembrane     413   430   Phd

TDE2041   conserved hypothetical protein    transmembrane     31    52    Phd
          (possible ABC transporter,
          permease protein)
                                            transmembrane     264   282   Phd
                                            transmembrane     313   337   Phd
                                            transmembrane     342   360   Phd
                                            transmembrane     387   409   Phd

TDE2044   Treponema-specific protein,       transmembrane     404   421   Phd
          uncharacterized
                                            transmembrane     458   475   Phd

TDE2057   hypothetical protein              transmembrane     5     22    Phd

TDE2059   hypothetical protein              transmembrane     14    31    Phd
                                            transmembrane     36    58    Phd

TDE2060   hypothetical protein              transmembrane     26    44    Phd

TDE2061   conserved hypothetical protein    transmembrane     11    29    Phd
                                            transmembrane     307   324   Phd

TDE2062   conserved hypothetical protein    transmembrane     1     20    Phd
                                            transmembrane     154   171   Phd

TDE2063   ferrous iron transport protein B  transmembrane     297   314   Phd
                                            transmembrane     319   338   Phd
                                            transmembrane     371   388   Phd
                                            transmembrane     431   455   Phd
                                            transmembrane     514   531   Phd
                                            transmembrane     536   560   Phd
                                            transmembrane     605   622   Phd
                                            transmembrane     888   905   Phd
                                            transmembrane     919   936   Phd

TDE2075   conserved hypothetical protein    transmembrane     20    37    Phd
                                            transmembrane     385   402   Phd
                                            transmembrane     475   492   Phd

TDE2078   conserved hypothetical protein    transmembrane     24    43    Phd

TDE2081   conserved hypothetical protein    transmembrane     11    28    Phd

TDE2083   anti-sigma F factor antagonist    transmembrane     58    78    Phd
          (spoIIAA)

TDE2086   heat shock protein                transmembrane     116   133   Phd
                                            transmembrane     138   155   Phd

TDE2090   glycerol-3-phosphate              transmembrane     73    90    Phd
          dehydrogenase
                                            transmembrane     196   213   Phd

TDE2103   conserved hypothetical protein    transmembrane     139   156   Phd
                                            transmembrane     172   189   Phd
                                            transmembrane     218   235   Phd

TDE2107   dihydroorotase                    transmembrane     350   368   Phd

TDE2111   Treponema-specific protein,       transmembrane     14    31    Phd
          uncharacterized
                                            transmembrane     167   184   Phd

TDE2112   conserved hypothetical protein    transmembrane     9     26    Phd
          (possible gliding motility
          protein gldG)
                                            transmembrane     211   228   Phd
                                            transmembrane     468   485   Phd

TDE2113   membrane spanning protein         transmembrane     30    48    Phd
                                            transmembrane     60    77    Phd
                                            transmembrane     98    122   Phd
                                            transmembrane     140   158   Phd
                                            transmembrane     170   188   Phd
                                            transmembrane     193   210   Phd
                                            transmembrane     222   239   Phd

TDE2115   Treponema-specific protein,       transmembrane     1     20    Phd
          uncharacterized
                                            transmembrane     752   771   Phd
                                            transmembrane     816   833   Phd
                                            transmembrane     1080  1098  Phd
                                            transmembrane     1227  1244  Phd

TDE2117   Treponema-specific protein,       transmembrane     12    31    Phd
          uncharacterized
                                            transmembrane     149   166   Phd
                                            transmembrane     258   277   Phd
                                            transmembrane     288   305   Phd

TDE2128   membrane-spanning permease        transmembrane     20    39    Phd
                                            transmembrane     47    66    Phd
                                            transmembrane     86    110   Phd
                                            transmembrane     115   132   Phd
                                            transmembrane     153   177   Phd
                                            transmembrane     182   199   Phd
                                            transmembrane     233   250   Phd
                                            transmembrane     278   296   Phd
                                            transmembrane     310   329   Phd
                                            transmembrane     334   358   Phd
                                            transmembrane     381   398   Phd
                                            transmembrane     403   421   Phd

TDE2130   hypothetical protein              transmembrane     6     23    Phd
                                            transmembrane     133   150   Phd

TDE2131   cobalamin biosynthesis protein    transmembrane     12    29    Phd
          (cbiM)
                                            transmembrane     44    68    Phd
                                            transmembrane     73    91    Phd
                                            transmembrane     101   118   Phd
                                            transmembrane     132   151   Phd
                                            transmembrane     161   180   Phd

TDE2133   cobalt transport membrane         transmembrane     38    62    Phd
          protein
                                            transmembrane     84    101   Phd
                                            transmembrane     117   136   Phd
                                            transmembrane     148   165   Phd
                                            transmembrane     237   255   Phd

TDE2142   methyl-accepting chemotaxis       transmembrane     12    29    Phd
          protein
                                            transmembrane     306   325   Phd

TDE2143   penicillin-binding protein 1C     transmembrane     19    36    Phd

TDE2145   transcriptional regulator         transmembrane     21    38    Phd
          (possibly xynR related)

TDE2157   conserved hypothetical protein    transmembrane     11    35    Phd
          (possible ABC transporter)
                                            transmembrane     43    67    Phd
                                            transmembrane     72    96    Phd
                                            transmembrane     117   134   Phd
                                            transmembrane     160   177   Phd
                                            transmembrane     207   227   Phd

TDE2159   conserved hypothetical protein    transmembrane     18    35    Phd
                                            transmembrane     40    64    Phd
                                            transmembrane     71    95    Phd
                                            transmembrane     118   137   Phd
                                            transmembrane     166   186   Phd

TDE2163   conserved hypothetical protein    transmembrane     6     23    Phd
                                            transmembrane     115   132   Phd
                                            transmembrane     137   161   Phd
                                            transmembrane     199   216   Phd

TDE2168   hypothetical protein              transmembrane     7     28    Phd

TDE2169   hypothetical protein              transmembrane     1     21    Phd
                                            transmembrane     52    69    Phd
                                            transmembrane     80    97    Phd
                                            transmembrane     111   129   Phd

TDE2174   acyl-CoA thioesterase             transmembrane     97    115   Phd
                                            transmembrane     259   276   Phd

TDE2178   conserved hypothetical protein    transmembrane     553   570   Phd
                                            transmembrane     575   595   Phd
                                            transmembrane     661   679   Phd

TDE2179   conserved hypothetical protein    transmembrane     24    41    Phd
          (possible chloride channel
          protein)
                                            transmembrane     68    86    Phd
                                            transmembrane     172   189   Phd
                                            transmembrane     199   216   Phd
                                            transmembrane     233   251   Phd
                                            transmembrane     278   295   Phd
                                            transmembrane     312   333   Phd
                                            transmembrane     339   362   Phd
                                            transmembrane     372   389   Phd

TDE2181   predicted PhoN phosphatase        transmembrane     41    59    Phd
                                            transmembrane     64    81    Phd
                                            transmembrane     110   127   Phd
                                            transmembrane     154   171   Phd
                                            transmembrane     181   199   Phd
                                            transmembrane     226   243   Phd
                                            transmembrane     248   265   Phd
                                            transmembrane     284   304   Phd
                                            transmembrane     318   335   Phd

TDE2192   threonine synthase                transmembrane     136   153   Phd
                                            transmembrane     218   235   Phd
                                            transmembrane     253   270   Phd

TDE2197   hypothetical protein              transmembrane     14    31    Phd

TDE2201   hypothetical protein              transmembrane     11    33    Phd

TDE2201.1 hypothetical protein              transmembrane     1     21    Phd
                                            transmembrane     42    59    Phd

TDE2202   conserved hypothetical protein    transmembrane     11    28    Phd
          (possible membrane-spanning
          protein)
                                            transmembrane     36    53    Phd
                                            transmembrane     67    91    Phd
                                            transmembrane     96    113   Phd
                                            transmembrane     125   149   Phd
                                            transmembrane     154   171   Phd
                                            transmembrane     179   197   Phd
                                            transmembrane     212   229   Phd
                                            transmembrane     245   262   Phd
                                            transmembrane     269   286   Phd

TDE2204   transport protein                 transmembrane     5     29    Phd
                                            transmembrane     34    51    Phd
                                            transmembrane     61    80    Phd
                                            transmembrane     98    122   Phd
                                            transmembrane     147   165   Phd
                                            transmembrane     187   204   Phd
                                            transmembrane     237   261   Phd
                                            transmembrane     286   304   Phd
                                            transmembrane     324   348   Phd
                                            transmembrane     353   375   Phd
                                            transmembrane     415   432   Phd

TDE2215   methylgalactoside ABC-related     transmembrane     230   248   Phd
          permease
                                            transmembrane     274   291   Phd
                                            transmembrane     296   315   Phd
                                            transmembrane     329   352   Phd
                                            transmembrane     360   377   Phd
                                            transmembrane     412   430   Phd
                                            transmembrane     456   473   Phd
                                            transmembrane     514   532   Phd
                                            transmembrane     538   555   Phd

TDE2217   methylgalactoside ABC-related     transmembrane     11    28    Phd
          transporter, binding protein

TDE2219   signal peptidase I                transmembrane     14    38    Phd
                                            transmembrane     43    60    Phd
                                            transmembrane     65    82    Phd
                                            transmembrane     93    110   Phd
                                            transmembrane     147   164   Phd

TDE2227   conserved hypothetical protein    transmembrane     18    35    Phd
          (possible integral membrane
          protein)
                                            transmembrane     40    61    Phd
                                            transmembrane     71    91    Phd
                                            transmembrane     105   125   Phd
                                            transmembrane     141   159   Phd
                                            transmembrane     189   206   Phd

TDE2233   iron ABC transporter, permease    transmembrane     14    31    Phd
          protein
                                            transmembrane     54    78    Phd
                                            transmembrane     102   126   Phd
                                            transmembrane     131   148   Phd
                                            transmembrane     157   177   Phd
                                            transmembrane     201   218   Phd
                                            transmembrane     250   272   Phd
                                            transmembrane     287   304   Phd
                                            transmembrane     316   333   Phd

TDE2234   iron (III) ABC transporter,       transmembrane     8     25    Phd
          iron-binding protein
                                            transmembrane     133   154   Phd
                                            transmembrane     204   222   Phd

TDE2236   glutamate mutase subumit E        transmembrane     223   240   Phd
          (methylaspartate mutase E chain)

TDE2241   hypothetical protein              transmembrane     35    53    Phd
                                            transmembrane     248   265   Phd

TDE2249   phospho-N-acetylmuramoyl-         transmembrane     22    40    Phd
          pentapeptide-transferase
                                            transmembrane     71    95    Phd
                                            transmembrane     128   148   Phd
                                            transmembrane     153   172   Phd
                                            transmembrane     191   213   Phd
                                            transmembrane     222   240   Phd
                                            transmembrane     264   281   Phd
                                            transmembrane     286   304   Phd
                                            transmembrane     330   348   Phd

TDE2250   conserved hypothetical protein    transmembrane     15    38    Phd
                                            transmembrane     59    77    Phd
                                            transmembrane     89    106   Phd
                                            transmembrane     125   142   Phd
                                            transmembrane     148   172   Phd
                                            transmembrane     177   197   Phd
                                            transmembrane     206   224   Phd
                                            transmembrane     229   246   Phd

TDE2251   uracil permease                   transmembrane     24    48    Phd
                                            transmembrane     73    92    Phd
                                            transmembrane     97    121   Phd
                                            transmembrane     126   143   Phd
                                            transmembrane     163   180   Phd
                                            transmembrane     185   206   Phd
                                            transmembrane     226   243   Phd
                                            transmembrane     301   325   Phd
                                            transmembrane     332   350   Phd
                                            transmembrane     370   387   Phd
                                            transmembrane     394   411   Phd

TDE2254   hypothetical protein              transmembrane     1     18    Phd
                                            transmembrane     44    61    Phd

TDE2256   membrane protein                  transmembrane     149   166   Phd
                                            transmembrane     173   197   Phd
                                            transmembrane     202   219   Phd
                                            transmembrane     225   243   Phd
                                            transmembrane     276   296   Phd
                                            transmembrane     329   350   Phd
                                            transmembrane     366   385   Phd

TDE2260   hypothetical protein              transmembrane     33    50    Phd

TDE2264   ABC-type multidrug/protein/lipid  transmembrane     22    40    Phd
          transport system, ATPase
          component
                                            transmembrane     73    95    Phd
                                            transmembrane     167   191   Phd
                                            transmembrane     271   288   Phd
                                            transmembrane     300   317   Phd

TDE2270   methyl-accepting chemotaxis       transmembrane     15    32    Phd
          protein
                                            transmembrane     286   310   Phd

TDE2275   tRNA pseudouridine synthase I     transmembrane     193   212   Phd

TDE2276   hypothetical protein              transmembrane     15    39    Phd
                                            transmembrane     49    69    Phd
                                            transmembrane     97    114   Phd
                                            transmembrane     136   153   Phd
                                            transmembrane     167   184   Phd
                                            transmembrane     189   206   Phd
                                            transmembrane     211   230   Phd

TDE2281   heat shock protein 70             transmembrane     175   192   Phd

TDE2283   ABC transporter, ATP-binding      transmembrane     23    40    Phd
          protein
                                            transmembrane     284   306   Phd
                                            transmembrane     343   367   Phd
                                            transmembrane     375   395   Phd

TDE2284   membrane fusion protein           transmembrane     15    32    Phd

TDE2295   conserved hypothetical protein    transmembrane     21    41    Phd
                                            transmembrane     64    88    Phd
                                            transmembrane     93    116   Phd

TDE2299   apolipoprotein N-acyltransferase  transmembrane     1     20    Phd
                                            transmembrane     28    45    Phd
                                            transmembrane     57    74    Phd
                                            transmembrane     81    98    Phd
                                            transmembrane     116   133   Phd
                                            transmembrane     153   171   Phd
                                            transmembrane     200   218   Phd
                                            transmembrane     499   516   Phd

TDE2302   conserved hypothetical protein    transmembrane     296   313   Phd
                                            transmembrane     344   361   Phd

TDE2314   hypothetical protein              transmembrane     1     21    Phd
                                            transmembrane     49    67    Phd

TDE2317   membrane protein, hemolysin III   transmembrane     23    40    Phd
          homolog
                                            transmembrane     53    75    Phd
                                            transmembrane     90    114   Phd
                                            transmembrane     129   153   Phd
                                            transmembrane     168   187   Phd
                                            transmembrane     193   211   Phd

TDE2318   conserved hypothetical protein    transmembrane     8     25    Phd
          (probable peptidase, M23/M37)
                                            transmembrane     221   238   Phd

TDE2319   Treponema-specific protein,       transmembrane     89    106   Phd
          uncharacterized
                                            transmembrane     124   142   Phd

TDE2321   Treponema-specific protein,       transmembrane     13    32    Phd
          uncharacterized
                                            transmembrane     56    80    Phd
                                            transmembrane     85    104   Phd

TDE2322   flagellar protein (fliL)          transmembrane     18    35    Phd

TDE2323   possible ion channel protein      transmembrane     21    38    Phd
                                            transmembrane     75    94    Phd
                                            transmembrane     99    116   Phd
                                            transmembrane     140   157   Phd
                                            transmembrane     171   189   Phd

TDE2325   hypothetical protein              transmembrane     17    34    Phd
                                            transmembrane     50    74    Phd
                                            transmembrane     139   156   Phd
                                            transmembrane     162   181   Phd
                                            transmembrane     233   250   Phd
                                            transmembrane     272   290   Phd
                                            transmembrane     295   312   Phd
                                            transmembrane     326   343   Phd

TDE2328   efflux pump component             transmembrane     28    45    Phd
                                            transmembrane     89    106   Phd
                                            transmembrane     129   153   Phd
                                            transmembrane     165   182   Phd
                                            transmembrane     214   231   Phd
                                            transmembrane     268   285   Phd
                                            transmembrane     310   327   Phd
                                            transmembrane     352   369   Phd
                                            transmembrane     393   412   Phd
                                            transmembrane     417   434   Phd
                                            transmembrane     486   503   Phd

TDE2333   sanA protein                      transmembrane     13    31    Phd
                                            transmembrane     143   160   Phd
                                            transmembrane     192   209   Phd

TDE2336   proton/sodium:glutamate           transmembrane     8     25    Phd
          symporter protein
                                            transmembrane     41    62    Phd
                                            transmembrane     79    97    Phd
                                            transmembrane     148   166   Phd
                                            transmembrane     200   217   Phd
                                            transmembrane     228   252   Phd
                                            transmembrane     320   344   Phd
                                            transmembrane     349   369   Phd
                                            transmembrane     376   393   Phd

TDE2341   zinc protease                     transmembrane     5     25    Phd
                                            transmembrane     30    47    Phd
                                            transmembrane     101   125   Phd
                                            transmembrane     312   334   Phd
                                            transmembrane     372   396   Phd
                                            transmembrane     401   418   Phd
                                            transmembrane     423   441   Phd

TDE2343   phosphatidate                     transmembrane     14    38    Phd
          cytidylyltransferase
                                            transmembrane     43    60    Phd
                                            transmembrane     70    88    Phd
                                            transmembrane     93    111   Phd
                                            transmembrane     124   148   Phd
                                            transmembrane     153   170   Phd
                                            transmembrane     190   207   Phd
                                            transmembrane     221   238   Phd
                                            transmembrane     264   281   Phd

TDE2357   ferrichrome ABC transporter       transmembrane     14    32    Phd
          permease
                                            transmembrane     37    55    Phd
                                            transmembrane     60    77    Phd
                                            transmembrane     95    119   Phd
                                            transmembrane     124   141   Phd
                                            transmembrane     148   167   Phd
                                            transmembrane     197   214   Phd
                                            transmembrane     237   261   Phd
                                            transmembrane     266   288   Phd
                                            transmembrane     293   317   Phd

TDE2365   ABC-related permease              transmembrane     21    41    Phd
                                            transmembrane     46    66    Phd
                                            transmembrane     91    115   Phd
                                            transmembrane     120   137   Phd
                                            transmembrane     174   191   Phd
                                            transmembrane     215   237   Phd
                                            transmembrane     255   279   Phd
                                            transmembrane     295   313   Phd

TDE2366   ABC transporter membrane-         transmembrane     13    31    Phd
          spanning permease
                                            transmembrane     55    79    Phd
                                            transmembrane     104   125   Phd
                                            transmembrane     140   164   Phd
                                            transmembrane     193   213   Phd
                                            transmembrane     238   255   Phd
                                            transmembrane     260   284   Phd

TDE2370   hypothetical protein              transmembrane     8     25    Phd

TDE2371   ferredoxin-type protein           transmembrane     34    51    Phd
                                            transmembrane     56    80    Phd
                                            transmembrane     109   126   Phd
                                            transmembrane     145   169   Phd
                                            transmembrane     174   191   Phd
                                            transmembrane     196   213   Phd

TDE2375   Treponema-specific protein,       transmembrane     19    40    Phd
          uncharacterized
                                            transmembrane     45    65    Phd
                                            transmembrane     74    96    Phd

TDE2379   conserved hypothetical protein    transmembrane     13    32    Phd
          (possible permease)
                                            transmembrane     120   137   Phd
                                            transmembrane     185   204   Phd
                                            transmembrane     233   254   Phd
                                            transmembrane     259   283   Phd
                                            transmembrane     294   312   Phd
                                            transmembrane     350   369   Phd

TDE2380   conserved hypothetical protein    transmembrane     22    40    Phd
          (possible membrane protein)
                                            transmembrane     193   213   Phd
                                            transmembrane     239   263   Phd
                                            transmembrane     268   292   Phd
                                            transmembrane     311   334   Phd
                                            transmembrane     359   376   Phd

TDE2381   histidine kinase-like ATPase      transmembrane     6     23    Phd
                                            transmembrane     32    52    Phd
                                            transmembrane     57    81    Phd
                                            transmembrane     100   124   Phd

TDE2383   cobalamin-5-phosphate synthase    transmembrane     35    53    Phd
                                            transmembrane     58    75    Phd
                                            transmembrane     107   124   Phd
                                            transmembrane     129   146   Phd
                                            transmembrane     169   193   Phd
                                            transmembrane     208   226   Phd
                                            transmembrane     240   257   Phd

TDE2386   hypothetical protein              transmembrane     15    34    Phd
                                            transmembrane     39    56    Phd
                                            transmembrane     79    102   Phd
                                            transmembrane     108   132   Phd
                                            transmembrane     145   162   Phd
                                            transmembrane     167   191   Phd

TDE2388   ATP-dependent Clp protease,       transmembrane     80    104   Phd
          proteolytic subunit 2
          (Endopeptidase Clp 2)

TDE2389   cobyrinic acid a,c-diamide        transmembrane     13    31    Phd
          synthase
                                            transmembrane     67    91    Phd
                                            transmembrane     96    113   Phd
                                            transmembrane     169   186   Phd
                                            transmembrane     218   235   Phd
                                            transmembrane     334   351   Phd

TDE2396   inner membrane protein            transmembrane     375   394   Phd
                                            transmembrane     451   468   Phd
                                            transmembrane     541   565   Phd

TDE2409   hypothetical protein              transmembrane     11    28    Phd
                                            transmembrane     33    51    Phd
                                            transmembrane     74    98    Phd
                                            transmembrane     119   138   Phd
                                            transmembrane     143   163   Phd

TDE2418   conserved hypothetical protein    transmembrane     17    34    Phd
                                            transmembrane     46    70    Phd
                                            transmembrane     96    120   Phd

TDE2427   preprotein translocase subunit    transmembrane     28    52    Phd

TDE2428.1 hypothetical protein              transmembrane     20    38    Phd

TDE2430   HlyD family secretion protein     transmembrane     27    44    Phd
          (possible ABC efflux system,
          membrane fusion protein)

TDE2431   ABC ATPase containing             transmembrane     9     26    Phd
          transporter
                                            transmembrane     204   222   Phd
                                            transmembrane     241   258   Phd
                                            transmembrane     321   345   Phd
                                            transmembrane     450   467   Phd

TDE2438   potassium channel protein         transmembrane     36    57    Phd
                                            transmembrane     70    87    Phd
                                            transmembrane     95    115   Phd
                                            transmembrane     238   255   Phd

TDE2440   ABC transporter, ATP-binding      transmembrane     29    46    Phd
          protein
                                            transmembrane     109   133   Phd
                                            transmembrane     138   155   Phd
                                            transmembrane     217   234   Phd
                                            transmembrane     240   257   Phd

TDE2450   conserved hypothetical protein    transmembrane     62    79    Phd

TDE2454   hypothetical protein              transmembrane     6     30    Phd
                                            transmembrane     73    90    Phd
                                            transmembrane     105   124   Phd
                                            transmembrane     140   160   Phd

TDE2460   aminotransferase                  transmembrane     65    82    Phd

TDE2464   hypothetical protein              transmembrane     16    36    Phd

TDE2467   conserved hypothetical protein    transmembrane     6     23    Phd
                                            transmembrane     28    45    Phd
                                            transmembrane     55    72    Phd
                                            transmembrane     89    106   Phd
                                            transmembrane     120   138   Phd
                                            transmembrane     158   175   Phd
                                            transmembrane     187   204   Phd
                                            transmembrane     226   244   Phd
                                            transmembrane     262   279   Phd
                                            transmembrane     298   315   Phd
                                            transmembrane     325   342   Phd

TDE2471   transmembrane protein with duf6   transmembrane     9     26    Phd
                                            transmembrane     66    85    Phd
                                            transmembrane     100   117   Phd
                                            transmembrane     128   145   Phd
                                            transmembrane     158   175   Phd
                                            transmembrane     189   206   Phd
                                            transmembrane     211   231   Phd
                                            transmembrane     247   265   Phd
                                            transmembrane     271   291   Phd
                                            transmembrane     308   325   Phd
                                            transmembrane     330   348   Phd

TDE2475   conserved hypothetical protein    transmembrane     23    40    Phd
          (possible integral membrane
          protein)
                                            transmembrane     57    74    Phd
                                            transmembrane     104   122   Phd
                                            transmembrane     142   159   Phd
                                            transmembrane     174   192   Phd
                                            transmembrane     204   224   Phd
                                            transmembrane     249   267   Phd
                                            transmembrane     288   310   Phd
                                            transmembrane     338   357   Phd
                                            transmembrane     366   383   Phd
                                            transmembrane     413   437   Phd

TDE2477   L-seryl-tRNA(Sec) selenium        transmembrane     73    90    Phd
          transferase
                                            transmembrane     147   164   Phd

TDE2481   hypothetical protein              transmembrane     18    39    Phd

TDE2483   conserved hypothetical protein    transmembrane     6     23    Phd
                                            transmembrane     164   182   Phd

TDE2484   conserved hypothetical protein    transmembrane     291   308   Phd
                                            transmembrane     335   352   Phd

TDE2492   Treponema-specific protein,       transmembrane     10    27    Phd
          uncharacterized

TDE2498   CDP-abequose synthase             transmembrane     54    71    Phd
                                            transmembrane     92    110   Phd

TDE2500   4-methyl-5(b-hydroxyethyl)-       transmembrane     97    114   Phd
          thiazole monophosphate
          biosynthesis enzyme
                                            transmembrane     152   169   Phd

TDE2503   possible periplasmic protein      transmembrane     34    51    Phd
                                            transmembrane     350   367   Phd

TDE2510   iron ABC transporter, ATP-        transmembrane     21    38    Phd
          binding protein
                                            transmembrane     58    75    Phd
                                            transmembrane     136   160   Phd
                                            transmembrane     165   182   Phd
                                            transmembrane     253   277   Phd

TDE2511   iron ABC transporter, ATP-        transmembrane     26    48    Phd
          binding protein
                                            transmembrane     59    76    Phd
                                            transmembrane     142   166   Phd
                                            transmembrane     171   188   Phd
                                            transmembrane     250   267   Phd
                                            transmembrane     281   299   Phd

TDE2512   aldehyde dehydrogenase            transmembrane     115   133   Phd

TDE2513   glucose inhibited division        transmembrane     119   136   Phd
          protein B

TDE2522   ABC transporter, ATP-binding      transmembrane     29    46    Phd
          protein
                                            transmembrane     69    86    Phd
                                            transmembrane     151   175   Phd
                                            transmembrane     180   197   Phd
                                            transmembrane     269   290   Phd
                                            transmembrane     295   319   Phd

TDE2523   hypothetical protein              transmembrane     28    48    Phd
                                            transmembrane     62    79    Phd
                                            transmembrane     147   164   Phd

TDE2524   ABC transporter, ATP-binding      transmembrane     1     18    Phd
          protein
                                            transmembrane     93    117   Phd

TDE2527   conserved hypothetical protein    transmembrane     6     23    Phd
                                            transmembrane     140   157   Phd
                                            transmembrane     180   204   Phd

TDE2527.1 hypothetical protein              transmembrane     28    45    Phd
                                            transmembrane     50    67    Phd
                                            transmembrane     158   175   Phd
                                            transmembrane     184   203   Phd
                                            transmembrane     225   242   Phd

TDE2528   conserved hypothetical protein    transmembrane     50    69    Phd
                                            transmembrane     90    112   Phd
                                            transmembrane     146   163   Phd

TDE2529   conserved hypothetical protein    transmembrane     10    27    Phd
                                            transmembrane     41    58    Phd

TDE2533   conserved hypothetical protein    transmembrane     16    33    Phd
          (possible transport protein)
                                            transmembrane     49    68    Phd
                                            transmembrane     75    99    Phd
                                            transmembrane     104   121   Phd
                                            transmembrane     136   153   Phd
                                            transmembrane     158   175   Phd
                                            transmembrane     199   216   Phd
                                            transmembrane     221   245   Phd
                                            transmembrane     250   267   Phd
                                            transmembrane     272   296   Phd
                                            transmembrane     301   325   Phd
                                            transmembrane     330   352   Phd
                                            transmembrane     357   377   Phd

TDE2535   pyruvate kinase                   transmembrane     364   381   Phd

TDE2537   hypothetical protein              transmembrane     17    34    Phd
                                            transmembrane     43    60    Phd
                                            transmembrane     79    96    Phd

TDE2546   conserved hypothetical protein    transmembrane     17    40    Phd
          (possible transporter)
                                            transmembrane     62    81    Phd
                                            transmembrane     88    105   Phd
                                            transmembrane     116   133   Phd
                                            transmembrane     157   175   Phd
                                            transmembrane     186   207   Phd

TDE2548   hypothetical protein              transmembrane     25    42    Phd

TDE2549   methyl-accepting chemotaxis       transmembrane     16    33    Phd
          protein
                                            transmembrane     295   314   Phd

TDE2551   hypothetical protein              transmembrane     72    89    Phd

TDE2552   ABC-type multidrug/protein/lipid  transmembrane     19    36    Phd
          transport system, ATPase
          component
                                            transmembrane     99    117   Phd
                                            transmembrane     122   139   Phd
                                            transmembrane     213   237   Phd
                                            transmembrane     242   260   Phd

TDE2557   hypothetical protein              transmembrane     19    38    Phd

TDE2558   ABC transporter, ATP-binding      transmembrane     22    46    Phd
          protein
                                            transmembrane     56    73    Phd
                                            transmembrane     87    104   Phd
                                            transmembrane     139   163   Phd
                                            transmembrane     168   185   Phd
                                            transmembrane     257   274   Phd
                                            transmembrane     280   298   Phd

TDE2559   ABC-type transport system,        transmembrane     25    43    Phd
          ATPase component
                                            transmembrane     56    73    Phd
                                            transmembrane     139   163   Phd
                                            transmembrane     168   185   Phd
                                            transmembrane     280   300   Phd

TDE2562   ABC transporter, permease         transmembrane     13    30    Phd
          component
                                            transmembrane     52    70    Phd
                                            transmembrane     88    106   Phd
                                            transmembrane     122   146   Phd
                                            transmembrane     166   190   Phd
                                            transmembrane     213   233   Phd
                                            transmembrane     239   258   Phd

TDE2569   3-deoxy-D-arabinoheptulosonate-   transmembrane     195   212   Phd
          7-phosphate synthase

TDE2572   phosphatidylglycerophosphate      transmembrane     15    39    Phd
          synthase
                                            transmembrane     78    102   Phd
                                            transmembrane     132   149   Phd
                                            transmembrane     156   180   Phd

TDE2582   possible sensory transduction     transmembrane     83    100   Phd
          protein
                                            transmembrane     595   612   Phd
                                            transmembrane     760   777   Phd
                                            transmembrane     1386  1403  Phd

TDE2585   methyl-accepting chemotaxis       transmembrane     30    47    Phd
          protein
                                            transmembrane     225   243   Phd
                                            transmembrane     248   266   Phd
                                            transmembrane     283   300   Phd
                                            transmembrane     318   336   Phd
                                            transmembrane     342   361   Phd
                                            transmembrane     369   386   Phd
                                            transmembrane     399   416   Phd

TDE2587   conserved hypothetical protein    transmembrane     10    27    Phd
          (possible exonuclease)

TDE2594   conserved hypothetical protein    transmembrane     151   168   Phd

TDE2600   conserved hypothetical protein    transmembrane     12    29    Phd

TDE2608   conserved hypothetical protein    transmembrane     99    121   Phd

TDE2610   hypothetical protein              transmembrane     11    28    Phd

TDE2611   Treponema-specific protein,       transmembrane     7     24    Phd
          uncharacterized
                                            transmembrane     294   312   Phd

TDE2615   signal peptidase II (lipoprotein  transmembrane     13    30    Phd
          signal peptidase)
                                            transmembrane     44    61    Phd
                                            transmembrane     66    84    Phd
                                            transmembrane     146   163   Phd

TDE2618   conserved hypothetical protein    transmembrane     178   196   Phd

TDE2623   possible cobalt ABC transporter   transmembrane     24    41    Phd
          permease
                                            transmembrane     46    63    Phd
                                            transmembrane     73    97    Phd
                                            transmembrane     102   119   Phd
                                            transmembrane     133   150   Phd
                                            transmembrane     220   238   Phd

TDE2624   conserved hypothetical protein    transmembrane     19    37    Phd
                                            transmembrane     42    60    Phd
                                            transmembrane     67    91    Phd
                                            transmembrane     115   132   Phd
                                            transmembrane     159   177   Phd

TDE2625   ABC transporter ATP-binding       transmembrane     30    47    Phd
          protein
                                            transmembrane     58    75    Phd
                                            transmembrane     146   170   Phd
                                            transmembrane     244   261   Phd
                                            transmembrane     266   287   Phd

TDE2626   ABC transporter ATP-binding       transmembrane     30    48    Phd
          protein
                                            transmembrane     66    83    Phd
                                            transmembrane     146   163   Phd
                                            transmembrane     168   185   Phd
                                            transmembrane     249   266   Phd
                                            transmembrane     283   300   Phd

TDE2630   ABC transporter dipeptide         transmembrane     6     23    Phd
          permease
                                            transmembrane     68    85    Phd
                                            transmembrane     93    117   Phd
                                            transmembrane     142   159   Phd
                                            transmembrane     172   189   Phd
                                            transmembrane     242   259   Phd
                                            transmembrane     285   303   Phd

TDE2631   ABC transporter dipeptide         transmembrane     13    30    Phd
          permease
                                            transmembrane     64    81    Phd
                                            transmembrane     86    110   Phd
                                            transmembrane     118   142   Phd
                                            transmembrane     172   196   Phd
                                            transmembrane     240   257   Phd

TDE2636   hypothetical protein              transmembrane     21    45    Phd
                                            transmembrane     50    67    Phd
                                            transmembrane     89    113   Phd
                                            transmembrane     118   135   Phd
                                            transmembrane     141   160   Phd
                                            transmembrane     165   182   Phd

TDE2648   hypothetical protein              transmembrane     16    40    Phd
                                            transmembrane     45    69    Phd
                                            transmembrane     90    114   Phd
                                            transmembrane     119   143   Phd
                                            transmembrane     148   166   Phd
                                            transmembrane     186   207   Phd

TDE2652   conserved hypothetical protein    transmembrane     19    37    Phd
          (possible integral membrane
          protein)
                                            transmembrane     47    64    Phd
                                            transmembrane     79    96    Phd
                                            transmembrane     101   125   Phd
                                            transmembrane     130   154   Phd
                                            transmembrane     164   184   Phd
                                            transmembrane     189   206   Phd
                                            transmembrane     221   238   Phd

TDE2653   conserved hypothetical protein    transmembrane     26    44    Phd
                                            transmembrane     65    84    Phd
                                            transmembrane     104   128   Phd
                                            transmembrane     136   160   Phd
                                            transmembrane     189   213   Phd
                                            transmembrane     227   244   Phd

TDE2654   similar to macrolide-efflux       transmembrane     12    30    Phd
          protein
                                            transmembrane     36    57    Phd
                                            transmembrane     76    95    Phd
                                            transmembrane     100   117   Phd
                                            transmembrane     139   156   Phd
                                            transmembrane     161   179   Phd
                                            transmembrane     218   240   Phd
                                            transmembrane     254   271   Phd
                                            transmembrane     284   308   Phd
                                            transmembrane     313   330   Phd
                                            transmembrane     340   357   Phd
                                            transmembrane     378   395   Phd

TDE2660   conserved hypothetical protein    transmembrane     99    116   Phd

TDE2669   phosphatidyltransferase           transmembrane     13    30    Phd
                                            transmembrane     35    58    Phd
                                            transmembrane     74    92    Phd
                                            transmembrane     97    116   Phd
                                            transmembrane     144   168   Phd
                                            transmembrane     173   190   Phd
                                            transmembrane     198   219   Phd
                                            transmembrane     225   244   Phd

TDE2670   lipophilic protein affecting      transmembrane     5     25    Phd
          bacterial lysis rate and
          methicillin resistance level
          protein
                                            transmembrane     52    69    Phd
                                            transmembrane     79    97    Phd
                                            transmembrane     107   125   Phd
                                            transmembrane     136   158   Phd
                                            transmembrane     175   199   Phd
                                            transmembrane     225   242   Phd
                                            transmembrane     249   267   Phd
                                            transmembrane     296   317   Phd
                                            transmembrane     322   341   Phd

TDE2672   conserved hypothetical protein    transmembrane     1     21    Phd
                                            transmembrane     343   363   Phd

TDE2673   hypothetical protein              transmembrane     10    29    Phd
                                            transmembrane     70    87    Phd
                                            transmembrane     169   187   Phd

TDE2679   conserved hypothetical protein    transmembrane     224   241   Phd
                                            transmembrane     255   278   Phd

TDE2684   hypothetical protein              transmembrane     11    35    Phd
                                            transmembrane     40    57    Phd

TDE2688   hypothetical protein              transmembrane     12    29    Phd

TDE2694   Treponema specific protein        transmembrane     476   494   Phd
          (76K), uncharacterized

TDE2697   possible 3-oxo-5-alpha-steroid    transmembrane     10    31    Phd
          4-dehydrogenase
                                            transmembrane     51    68    Phd
                                            transmembrane     76    95    Phd
                                            transmembrane     106   130   Phd
                                            transmembrane     144   161   Phd
                                            transmembrane     203   224   Phd

TDE2700   sodium:citrate symporter          transmembrane     19    43    Phd
                                            transmembrane     66    83    Phd
                                            transmembrane     103   120   Phd
                                            transmembrane     131   155   Phd
                                            transmembrane     160   183   Phd
                                            transmembrane     200   217   Phd
                                            transmembrane     258   276   Phd
                                            transmembrane     281   299   Phd
                                            transmembrane     323   347   Phd
                                            transmembrane     352   376   Phd
                                            transmembrane     409   426   Phd

TDE2704   SecD/SecF related antibiotic      transmembrane     9     26    Phd
          transport protein
                                            transmembrane     217   234   Phd
                                            transmembrane     243   261   Phd
                                            transmembrane     266   284   Phd
                                            transmembrane     323   340   Phd
                                            transmembrane     349   367   Phd
                                            transmembrane     421   439   Phd
                                            transmembrane     723   747   Phd
                                            transmembrane     752   770   Phd
                                            transmembrane     775   792   Phd
                                            transmembrane     833   857   Phd
                                            transmembrane     862   879   Phd

TDE2706   possible oligogalacturonide       transmembrane     22    45    Phd
          transporter
                                            transmembrane     81    98    Phd
                                            transmembrane     108   125   Phd
                                            transmembrane     152   169   Phd
                                            transmembrane     174   192   Phd
                                            transmembrane     235   253   Phd
                                            transmembrane     262   279   Phd
                                            transmembrane     294   311   Phd
                                            transmembrane     317   334   Phd
                                            transmembrane     371   388   Phd
                                            transmembrane     561   578   Phd

TDE2710   possible damage inducible         transmembrane     24    41    Phd
          protein
                                            transmembrane     64    84    Phd
                                            transmembrane     109   133   Phd
                                            transmembrane     138   155   Phd
                                            transmembrane     178   197   Phd
                                            transmembrane     202   220   Phd
                                            transmembrane     251   268   Phd
                                            transmembrane     287   307   Phd
                                            transmembrane     329   347   Phd
                                            transmembrane     364   384   Phd
                                            transmembrane     396   415   Phd
                                            transmembrane     428   446   Phd

TDE2717   conserved hypothetical protein    transmembrane     34    58    Phd
                                            transmembrane     63    80    Phd
                                            transmembrane     98    122   Phd
                                            transmembrane     152   176   Phd

TDE2718   magnesium transporter             transmembrane     282   299   Phd
                                            transmembrane     304   321   Phd
                                            transmembrane     360   377   Phd
                                            transmembrane     387   408   Phd
                                            transmembrane     426   445   Phd

TDE2729   hypothetical protein              transmembrane     10    27    Phd
                                            transmembrane     44    68    Phd
                                            transmembrane     73    90    Phd
                                            transmembrane     95    112   Phd
                                            transmembrane     118   139   Phd
                                            transmembrane     153   177   Phd
                                            transmembrane     182   199   Phd
                                            transmembrane     212   229   Phd

TDE2738.1 hypothetical protein              transmembrane     1     28    Phd
                                            transmembrane     33    50    Phd

TDE2739   conserved hypothetical protein    transmembrane     1     19    Phd
                                            transmembrane     35    52    Phd
                                            transmembrane     66    83    Phd
                                            transmembrane     102   120   Phd

TDE2746   type I restriction-modification   transmembrane     27    44    Phd
          system M subunit (DNA-
          methyltransferase)
                                            transmembrane     337   354   Phd

TDE2753   conserved hypothetical protein    transmembrane     45    65    Phd
                                            transmembrane     170   187   Phd

TDE2759   hypothetical protein              transmembrane     129   146   Phd

TDE2760   flagellar biosynthetic protein    transmembrane     6     23    Phd
                                            transmembrane     68    92    Phd
                                            transmembrane     114   131   Phd
                                            transmembrane     196   220   Phd
                                            transmembrane     232   256   Phd

TDE2761   conserved hypothetical protein    transmembrane     1     21    Phd
          (possible flagellar protein)
                                            transmembrane     82    99    Phd

TDE2764   flagellar protein                 transmembrane     34    52    Phd

TDE2766   flagellar motor protein           transmembrane     8     25    Phd
                                            transmembrane     34    58    Phd
                                            transmembrane     148   165   Phd
                                            transmembrane     184   201   Phd

TDE2773   hypothetical protein              transmembrane     20    37    Phd

TDE2776   proline iminopeptidase            transmembrane     110   131   Phd

TDE2778   possible stress-responsive        transmembrane     30    53    Phd
          transcriptional regulator

TDE2781   ABC transporter ATP-binding       transmembrane     72    91    Phd
          protein
                                            transmembrane     149   166   Phd
                                            transmembrane     173   190   Phd
                                            transmembrane     247   264   Phd
                                            transmembrane     269   292   Phd

TDE2782   ABC transporter, ATP-             transmembrane     20    37    Phd
          binding/permease protein
                                            transmembrane     72    90    Phd
                                            transmembrane     155   172   Phd
                                            transmembrane     177   194   Phd
                                            transmembrane     262   280   Phd

TDE2783   methyl-accepting chemotaxis       transmembrane     22    39    Phd
          protein
                                            transmembrane     303   323   Phd

TDE2785   conserved hypothetical protein    transmembrane     12    29    Phd
                                            transmembrane     62    79    Phd
                                            transmembrane     91    115   Phd
                                            transmembrane     162   186   Phd

TDE2786.1 hypothetical protein              transmembrane     13    30    Phd

TDE756.1  hypothetical protein              transmembrane     28    46    Phd

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