BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= AA02590
(150 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15602753|ref|NP_245825.1| hypothetical protein PM0888 [P... 192 7e-48
gi|152978624|ref|YP_001344253.1| protein of unknown functio... 169 7e-41
gi|113460717|ref|YP_718784.1| possible regulator of membran... 161 1e-38
gi|32029572|ref|ZP_00132575.1| COG1585: Membrane protein im... 159 4e-38
gi|52424890|ref|YP_088027.1| hypothetical protein MS0835 [M... 130 2e-29
gi|153094546|gb|EDN75372.1| hypothetical protein MHA_2491 [... 130 3e-29
gi|153011583|ref|YP_001372797.1| protein of unknown functio... 85 1e-15
gi|37527682|ref|NP_931026.1| hypothetical protein plu3822 [... 83 5e-15
gi|110635070|ref|YP_675278.1| protein of unknown function D... 82 7e-15
gi|146329879|ref|YP_001209291.1| hypothetical protein DNO_0... 80 3e-14
gi|154245825|ref|YP_001416783.1| protein of unknown functio... 80 4e-14
gi|115526797|ref|YP_783708.1| protein of unknown function D... 77 3e-13
gi|17988364|ref|NP_540997.1| NODULATION PROTEIN NFED, C-ter... 76 6e-13
gi|23499841|ref|NP_699281.1| hypothetical protein BRA0074 [... 76 7e-13
gi|118069591|ref|ZP_01537834.1| protein of unknown function... 75 1e-12
gi|90577666|ref|ZP_01233477.1| hypothetical protein VAS14_1... 74 2e-12
gi|90426315|ref|YP_534685.1| protein of unknown function DU... 73 4e-12
gi|50120134|ref|YP_049301.1| hypothetical protein ECA1195 [... 73 6e-12
gi|15891177|ref|NP_356849.1| hypothetical protein AGR_L_212... 72 7e-12
gi|144898954|emb|CAM75818.1| membrane protein containing DU... 72 1e-11
gi|59713350|ref|YP_206125.1| hypothetical protein VFA0167 [... 72 1e-11
gi|146309318|ref|YP_001189783.1| protein of unknown functio... 71 2e-11
gi|13472655|ref|NP_104222.1| hypothetical protein mlr3022 [... 71 2e-11
gi|156973613|ref|YP_001444520.1| hypothetical protein VIBHA... 71 2e-11
gi|153834073|ref|ZP_01986740.1| membrane protein [Vibrio ha... 71 2e-11
gi|89073672|ref|ZP_01160186.1| hypothetical protein SKA34_1... 70 5e-11
gi|54302698|ref|YP_132691.1| hypothetical protein PBPRB1019... 68 1e-10
gi|116184499|ref|ZP_01474434.1| hypothetical protein VEx2w_... 66 7e-10
gi|27382860|ref|NP_774389.1| hypothetical protein bll7749 [... 65 9e-10
gi|90414646|ref|ZP_01222618.1| hypothetical protein P3TCK_0... 65 1e-09
gi|148265459|ref|YP_001232165.1| protein of unknown functio... 65 1e-09
gi|89095200|ref|ZP_01168124.1| hypothetical protein MED92_0... 65 1e-09
gi|86359149|ref|YP_471041.1| hypothetical protein RHE_CH035... 65 1e-09
gi|40063314|gb|AAR38132.1| conserved hypothetical protein [... 65 1e-09
gi|123443268|ref|YP_001007242.1| hypothetical protein YE305... 65 2e-09
gi|117924743|ref|YP_865360.1| protein of unknown function D... 64 2e-09
gi|91225894|ref|ZP_01260863.1| hypothetical protein V12G01_... 64 3e-09
gi|39933954|ref|NP_946230.1| hypothetical protein RPA0877 [... 64 4e-09
gi|116253815|ref|YP_769653.1| putative transmembrane protei... 63 5e-09
gi|86751638|ref|YP_488134.1| Protein of unknown function DU... 63 6e-09
gi|145300401|ref|YP_001143242.1| hypothetical protein ASA_3... 62 1e-08
gi|77974246|ref|ZP_00829787.1| COG1585: Membrane protein im... 62 1e-08
gi|70733234|ref|YP_263007.1| hypothetical protein PFL_5949 ... 61 2e-08
gi|85375743|ref|YP_459805.1| hypothetical protein ELI_14580... 60 3e-08
gi|103487697|ref|YP_617258.1| protein of unknown function D... 60 3e-08
gi|153826193|ref|ZP_01978860.1| conserved hypothetical prot... 59 8e-08
gi|15807136|ref|NP_295865.1| hypothetical protein DR_2142 [... 59 8e-08
gi|149184921|ref|ZP_01863238.1| hypothetical protein ED21_1... 59 1e-07
gi|148982033|ref|ZP_01816594.1| hypothetical protein VSWAT3... 59 1e-07
gi|114706194|ref|ZP_01439097.1| hypothetical protein FP2506... 58 1e-07
gi|16123261|ref|NP_406574.1| hypothetical protein YPO3084 [... 58 2e-07
gi|148252915|ref|YP_001237500.1| putative membrane protein ... 57 2e-07
gi|91975343|ref|YP_568002.1| protein of unknown function DU... 57 3e-07
gi|84393797|ref|ZP_00992544.1| hypothetical protein V12B01_... 57 3e-07
gi|15640991|ref|NP_230622.1| hypothetical protein VC0975 [V... 56 5e-07
gi|153875727|ref|ZP_02003398.1| Nodulation efficiency, NfeD... 56 5e-07
gi|146343056|ref|YP_001208104.1| hypothetical protein BRADO... 56 6e-07
gi|53802721|ref|YP_115498.1| hypothetical protein MCA3111 [... 56 6e-07
gi|86148407|ref|ZP_01066699.1| hypothetical protein MED222_... 56 8e-07
gi|118580044|ref|YP_901294.1| protein of unknown function D... 55 9e-07
gi|90416581|ref|ZP_01224512.1| hypothetical protein GB2207_... 55 1e-06
gi|88860838|ref|ZP_01135474.1| membrane protein [Pseudoalte... 55 2e-06
gi|117619384|ref|YP_858040.1| nodulation efficiency family ... 54 3e-06
gi|28897578|ref|NP_797183.1| hypothetical protein VP0804 [V... 54 3e-06
gi|153217067|ref|ZP_01950831.1| membrane protein [Vibrio ch... 54 3e-06
gi|116188631|ref|ZP_01478400.1| hypothetical protein VchoM_... 54 3e-06
gi|21232309|ref|NP_638226.1| hypothetical protein XCC2878 [... 54 4e-06
gi|150422209|gb|EDN14173.1| Membrane protein implicated in ... 54 4e-06
gi|153829876|ref|ZP_01982543.1| membrane protein [Vibrio ch... 53 4e-06
gi|85715894|ref|ZP_01046872.1| hypothetical protein NB311A_... 53 5e-06
gi|156934927|ref|YP_001438843.1| hypothetical protein ESA_0... 53 5e-06
gi|50085989|ref|YP_047499.1| hypothetical protein ACIAD2966... 53 7e-06
gi|15966558|ref|NP_386911.1| hypothetical protein SMc04021 ... 52 9e-06
>gi|15602753|ref|NP_245825.1| hypothetical protein PM0888 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12721201|gb|AAK02972.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 149
Score = 192 bits (487), Expect = 7e-48, Method: Composition-based stats.
Identities = 104/148 (70%), Positives = 123/148 (83%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIY 62
MEW + W +WHWLILGF+LLIAE+VIPGVFLLWWGLAAIV+AG+M IP+L L+ LA+ Y
Sbjct: 1 MEWFSTWSLWHWLILGFVLLIAELVIPGVFLLWWGLAAIVIAGVMALIPSLSLTVLAISY 60
Query: 63 AVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTW 122
A++AIILS+ WW+YQHG+D+ DQ S LNQRDHAM+G +G V IA NGIGRG FGDTTW
Sbjct: 61 AILAIILSVSWWKYQHGQDKSDQLHSSLNQRDHAMLGTRGTVQEIAANGIGRGHFGDTTW 120
Query: 123 RIQGRDLAVNDIVEVVSVDSITLKVKKI 150
RIQG DL V D+VEV VD ITLKVKK+
Sbjct: 121 RIQGTDLQVGDLVEVHQVDGITLKVKKV 148
>gi|152978624|ref|YP_001344253.1| protein of unknown function DUF107 [Actinobacillus succinogenes
130Z]
gi|150840347|gb|ABR74318.1| protein of unknown function DUF107 [Actinobacillus succinogenes
130Z]
Length = 148
Score = 169 bits (427), Expect = 7e-41, Method: Composition-based stats.
Identities = 95/148 (64%), Positives = 116/148 (78%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIY 62
M WL W WHWLILGF+LLIAE++IPG+FLLWWGLAAIVVAG+M FI AL L L +IY
Sbjct: 1 MAWLTIWTAWHWLILGFVLLIAEILIPGIFLLWWGLAAIVVAGLMAFITALTLPVLGMIY 60
Query: 63 AVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTW 122
A++A I S++WW+YQH +D D+ SVLNQR++AM+ +G V I ENGIGRG FGDTTW
Sbjct: 61 AILATIFSVLWWKYQHKRDLADEKLSVLNQRNNAMLASRGVVQDIGENGIGRGRFGDTTW 120
Query: 123 RIQGRDLAVNDIVEVVSVDSITLKVKKI 150
RI+G +L V D VEV++V ITL VKKI
Sbjct: 121 RIEGSELTVGDTVEVLAVKGITLIVKKI 148
>gi|113460717|ref|YP_718784.1| possible regulator of membrane protease activity [Haemophilus
somnus 129PT]
gi|112822760|gb|ABI24849.1| possible regulator of membrane protease activity [Haemophilus
somnus 129PT]
Length = 147
Score = 161 bits (407), Expect = 1e-38, Method: Composition-based stats.
Identities = 93/147 (63%), Positives = 115/147 (78%), Gaps = 1/147 (0%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIY 62
MEW W WHWLILGF+LLIAE+++PGVFLLWWGLAAI+V+ I I L L+ VIY
Sbjct: 1 MEWFDAWTFWHWLILGFLLLIAEIIVPGVFLLWWGLAAIIVSMITIIID-LSLTIQCVIY 59
Query: 63 AVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTW 122
++AI+LS+ WW+YQH KD+ DQ+ S LN+RDHAM+G +GKV IAENGIGRG FGDTTW
Sbjct: 60 GILAIVLSVAWWKYQHTKDEKDQANSSLNRRDHAMLGCRGKVEVIAENGIGRGVFGDTTW 119
Query: 123 RIQGRDLAVNDIVEVVSVDSITLKVKK 149
RIQG+ L DI+EV +V+ ITL V+K
Sbjct: 120 RIQGKGLQQGDIIEVQAVNGITLIVQK 146
>gi|32029572|ref|ZP_00132575.1| COG1585: Membrane protein implicated in regulation of membrane
protease activity [Haemophilus somnus 2336]
Length = 147
Score = 159 bits (403), Expect = 4e-38, Method: Composition-based stats.
Identities = 93/147 (63%), Positives = 114/147 (77%), Gaps = 1/147 (0%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIY 62
MEW W WHWLILGF+LLIAE+++PGVFLLWWGLAAI+V+ I I L L+ VIY
Sbjct: 1 MEWFDAWTFWHWLILGFLLLIAEIIVPGVFLLWWGLAAIIVSMITIIID-LSLTIQCVIY 59
Query: 63 AVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTW 122
++AI+LS+ WW+YQH KD+ DQ+ S LN+RDHAM+G GKV IAENGIGRG FGDTTW
Sbjct: 60 GILAIVLSVAWWKYQHTKDEKDQANSSLNRRDHAMLGCLGKVEVIAENGIGRGVFGDTTW 119
Query: 123 RIQGRDLAVNDIVEVVSVDSITLKVKK 149
RIQG+ L DI+EV +V+ ITL V+K
Sbjct: 120 RIQGKGLQQGDIIEVQAVNGITLIVQK 146
>gi|52424890|ref|YP_088027.1| hypothetical protein MS0835 [Mannheimia succiniciproducens MBEL55E]
gi|52306942|gb|AAU37442.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 150
Score = 130 bits (327), Expect = 2e-29, Method: Composition-based stats.
Identities = 89/148 (60%), Positives = 118/148 (79%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIY 62
M+WL W VWHWLILGF+LLI E++IPG+FLLWWG++AI++A IM L L+ L + Y
Sbjct: 1 MDWLFAWSVWHWLILGFLLLIGEILIPGIFLLWWGISAIIMAAIMALFTTLTLTVLGISY 60
Query: 63 AVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTW 122
AV+A++LS++WW+YQH KD+ D+++SVLNQR+HAMIG G V IA NG+GRG FGDTTW
Sbjct: 61 AVLALLLSLVWWKYQHNKDKSDEARSVLNQRNHAMIGAIGAVQEIALNGVGRGYFGDTTW 120
Query: 123 RIQGRDLAVNDIVEVVSVDSITLKVKKI 150
RIQG++L V D +EV+ V ITL V+K+
Sbjct: 121 RIQGKELKVGDRIEVLKVRGITLIVRKL 148
>gi|153094546|gb|EDN75372.1| hypothetical protein MHA_2491 [Mannheimia haemolytica PHL213]
Length = 145
Score = 130 bits (326), Expect = 3e-29, Method: Composition-based stats.
Identities = 73/147 (49%), Positives = 101/147 (68%), Gaps = 3/147 (2%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIY 62
M+W +W W ILGF+LL E+V+PGVF++WWG A++++A I+ L + ++
Sbjct: 1 MDWFFNW--IGWSILGFVLLALELVLPGVFIMWWGFASLILAFIVALF-TLGQALQIALF 57
Query: 63 AVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTW 122
A+IA I S+IWW+YQHGKD+ + S LN R+HAM+G QG V+ I NGI RG FGDTTW
Sbjct: 58 AIIATIFSLIWWKYQHGKDKKEDQSSSLNSREHAMLGAQGFVVEILPNGIARGKFGDTTW 117
Query: 123 RIQGRDLAVNDIVEVVSVDSITLKVKK 149
R+ G +L V D +EV V+ ITL V+K
Sbjct: 118 RVIGNNLQVADKIEVQKVEGITLFVRK 144
>gi|153011583|ref|YP_001372797.1| protein of unknown function DUF107 [Ochrobactrum anthropi ATCC
49188]
gi|151563471|gb|ABS16968.1| protein of unknown function DUF107 [Ochrobactrum anthropi ATCC
49188]
Length = 153
Score = 85.1 bits (209), Expect = 1e-15, Method: Composition-based stats.
Identities = 49/149 (32%), Positives = 84/149 (56%), Gaps = 4/149 (2%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIV---VAGIMKFIPALPLSALA 59
+E+L+ G+W+WL+ G ILLI E+ PG F +W+GLAA+V +A ++
Sbjct: 3 IEYLSGLGIWNWLVFGLILLILEISAPGFFFIWFGLAALVTGALAFLLSSTTGFGWQFQT 62
Query: 60 VIYAVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGD 119
V++ V+A+I ++ R+ G D + +LN+R ++G + + NG GR D
Sbjct: 63 VVFLVLAVIFVLVGRRF-FGSRSTDADEPLLNRRGEQLVGQRATLTEPIINGRGRIRIND 121
Query: 120 TTWRIQGRDLAVNDIVEVVSVDSITLKVK 148
T WR++G DL V VV+ D ++L+++
Sbjct: 122 TMWRVKGPDLPTGTEVRVVAFDPVSLEIE 150
>gi|37527682|ref|NP_931026.1| hypothetical protein plu3822 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787117|emb|CAE16194.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 151
Score = 82.8 bits (203), Expect = 5e-15, Method: Composition-based stats.
Identities = 53/140 (37%), Positives = 83/140 (59%), Gaps = 3/140 (2%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
W W G +LLIAE++ G +LLW G+AAIVVA + +P + +++A + +LS
Sbjct: 11 WLWFSFGGLLLIAELLGTGGYLLWTGIAAIVVAFVTWLLPGIDWEWQGILFATLT-LLSA 69
Query: 72 IWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQ-GRDLA 130
+ WRY + + + LNQ++H +IG++ K+ T ENG R D +WR+ +L
Sbjct: 70 MLWRYWL-RRRPSKGGDTLNQKEHQLIGIRAKLTTDTENGYSRVKLADGSWRVHCNSELP 128
Query: 131 VNDIVEVVSVDSITLKVKKI 150
+ VEV++VD ITLKVK +
Sbjct: 129 AHTEVEVIAVDGITLKVKPV 148
>gi|110635070|ref|YP_675278.1| protein of unknown function DUF107 [Mesorhizobium sp. BNC1]
gi|110286054|gb|ABG64113.1| protein of unknown function DUF107 [Mesorhizobium sp. BNC1]
Length = 153
Score = 82.4 bits (202), Expect = 7e-15, Method: Composition-based stats.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 3/150 (2%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGI---MKFIPALPLSALA 59
M +L D G W+W++LGFILL+ E+++PGVFLLW G+AA++ + + +
Sbjct: 3 MSFLTDLGPWNWMLLGFILLVLEIILPGVFLLWIGIAAVLTGALSLQLWDVSFWTWQVQV 62
Query: 60 VIYAVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGD 119
+++ ++++ + I R + + D + +LN+R ++G + G GR GD
Sbjct: 63 LVFLALSLVSAFIGKRVTDARREEDTDEPLLNRRAEQLVGRTAALEEPISGGYGRIRLGD 122
Query: 120 TTWRIQGRDLAVNDIVEVVSVDSITLKVKK 149
TTWR+ G DL V VVS L V+K
Sbjct: 123 TTWRVTGPDLPAGTRVRVVSARGGDLHVEK 152
>gi|146329879|ref|YP_001209291.1| hypothetical protein DNO_0372 [Dichelobacter nodosus VCS1703A]
gi|146233349|gb|ABQ14327.1| conserved hypothetical protein [Dichelobacter nodosus VCS1703A]
Length = 150
Score = 80.5 bits (197), Expect = 3e-14, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
W+WL+L L E++ P F + LAA +VA I P L LSA + +A+ A++ +I
Sbjct: 9 WNWLVLAAFFLFVELISPSFFAFFLSLAAAIVAAISFIYPELSLSAQGICFALFALVNTI 68
Query: 72 IWWRYQHGKDQIDQS--KSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQGRDL 129
WW++ + Q D+ + LN ++ +IG ++ T ENG G+ D+ W I G D+
Sbjct: 69 FWWKFVKKRWQNDRRDLSTQLNHPNNELIGRHFQLQTPIENGRGQLQINDSFWTIHGEDM 128
Query: 130 AVNDIVEVVSVDSITLKVKKI 150
I+++ ++S+ + V ++
Sbjct: 129 PAGAIIQIDRIESLDIYVSRV 149
>gi|154245825|ref|YP_001416783.1| protein of unknown function DUF107 [Xanthobacter autotrophicus Py2]
gi|154159910|gb|ABS67126.1| protein of unknown function DUF107 [Xanthobacter autotrophicus Py2]
Length = 150
Score = 80.1 bits (196), Expect = 4e-14, Method: Composition-based stats.
Identities = 54/144 (37%), Positives = 80/144 (55%), Gaps = 8/144 (5%)
Query: 10 GVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIIL 69
G W W ILG +LL+AE+ PG FLLW GLAA+ V G + ++ L + + +A +A+I
Sbjct: 10 GPWAWFILGGVLLVAEIAAPGAFLLWLGLAAL-VTGALSYVVGLTWQSEVLAFAALAVIA 68
Query: 70 SIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAE---NGIGRGAFGDTTWRIQG 126
+I R + + LN+R + G+V T+ E G+GR DT WRI+G
Sbjct: 69 VLIGRRISPAPGRA-SDRPFLNRRSEGFV---GRVFTLDEPILGGVGRVRIDDTVWRIEG 124
Query: 127 RDLAVNDIVEVVSVDSITLKVKKI 150
DLA V+V++ D TLKV+ +
Sbjct: 125 PDLAAGRDVKVIAADGATLKVEAV 148
>gi|115526797|ref|YP_783708.1| protein of unknown function DUF107 [Rhodopseudomonas palustris
BisA53]
gi|115520744|gb|ABJ08728.1| protein of unknown function DUF107 [Rhodopseudomonas palustris
BisA53]
Length = 145
Score = 77.0 bits (188), Expect = 3e-13, Method: Composition-based stats.
Identities = 50/144 (34%), Positives = 77/144 (53%), Gaps = 4/144 (2%)
Query: 4 EWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYA 63
E +A G W+WLILGFIL+ E++ PG+FL W GLAA++V G M + A + +A
Sbjct: 3 ELIASMGSWNWLILGFILIALEMLAPGIFLFWLGLAALLVGG-MSMLTDPSWQAQLLAFA 61
Query: 64 VIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWR 123
+ AI +W +H ++ LN+R A++G + + +G+G DT WR
Sbjct: 62 LFAISAVPLW---RHFARTTSETAPFLNRRADALVGREFTLEKPIVDGVGTVRIDDTIWR 118
Query: 124 IQGRDLAVNDIVEVVSVDSITLKV 147
I G D+A +++V D L V
Sbjct: 119 ISGPDIAAGSKIKIVHADGANLTV 142
>gi|17988364|ref|NP_540997.1| NODULATION PROTEIN NFED, C-terminal only [Brucella melitensis 16M]
gi|62317033|ref|YP_222886.1| hypothetical protein BruAb2_0074 [Brucella abortus biovar 1 str.
9-941]
gi|83269027|ref|YP_418318.1| nodulation protein nfed, c-terminal only [Brucella melitensis
biovar Abortus 2308]
gi|148558190|ref|YP_001257150.1| hypothetical protein BOV_A0069 [Brucella ovis ATCC 25840]
gi|17984141|gb|AAL53261.1| NODULATION PROTEIN NFED, C-terminal only [Brucella melitensis 16M]
gi|62197226|gb|AAX75525.1| conserved hypothetical protein [Brucella abortus biovar 1 str.
9-941]
gi|82939301|emb|CAJ12239.1| nodulation protein nfed, c-terminal only [Brucella melitensis
biovar Abortus 2308]
gi|148369475|gb|ABQ62347.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 155
Score = 76.3 bits (186), Expect = 6e-13, Method: Composition-based stats.
Identities = 49/148 (33%), Positives = 84/148 (56%), Gaps = 4/148 (2%)
Query: 4 EWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVV---AGIMKFIPALPLSALAV 60
E+L G+W+WL+ G ILLI E++ PG F +W+GLAA+V+ A ++ V
Sbjct: 4 EFLFQLGIWNWLVFGLILLILEILAPGFFFIWFGLAALVIGALAFLLSSTAGFGWQLQTV 63
Query: 61 IYAVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDT 120
I+ V+AI+ ++ R+ G D + +LN+R ++G + + NG GR DT
Sbjct: 64 IFLVLAIVFTLAGRRF-FGSKSNDTGEPLLNRRGEQLVGQRATLTEPIVNGHGRIHINDT 122
Query: 121 TWRIQGRDLAVNDIVEVVSVDSITLKVK 148
TWR++G DL + +V+ D ++L+++
Sbjct: 123 TWRVKGPDLPAGTEIRIVAFDPVSLEIE 150
>gi|23499841|ref|NP_699281.1| hypothetical protein BRA0074 [Brucella suis 1330]
gi|23463411|gb|AAN33286.1| conserved hypothetical protein [Brucella suis 1330]
Length = 155
Score = 75.9 bits (185), Expect = 7e-13, Method: Composition-based stats.
Identities = 49/148 (33%), Positives = 84/148 (56%), Gaps = 4/148 (2%)
Query: 4 EWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIV---VAGIMKFIPALPLSALAV 60
E+L G+W+WL+ G ILLI E++ PG F +W+GLAA+V +A ++ V
Sbjct: 4 EFLFQLGIWNWLVFGLILLILEILAPGFFFIWFGLAALVTGALAFLLSSTAGFGWQLQTV 63
Query: 61 IYAVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDT 120
I+ V+AI+ ++ R+ G D + +LN+R ++G + + NG GR DT
Sbjct: 64 IFLVLAIVFTLAGRRF-FGSKSNDTGEPLLNRRGEQLVGQRATLTEPIVNGHGRIHINDT 122
Query: 121 TWRIQGRDLAVNDIVEVVSVDSITLKVK 148
TWR++G DL + +V+ D ++L+++
Sbjct: 123 TWRVKGPDLPAGTEIRIVAFDPVSLEIE 150
>gi|118069591|ref|ZP_01537834.1| protein of unknown function DUF107 [Serratia proteamaculans 568]
gi|118016119|gb|EAV30048.1| protein of unknown function DUF107 [Serratia proteamaculans 568]
Length = 153
Score = 75.1 bits (183), Expect = 1e-12, Method: Composition-based stats.
Identities = 55/141 (39%), Positives = 85/141 (60%), Gaps = 2/141 (1%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
W WL LG +LL AE++ +LLW G++A+VV I+ +P L VI+AV+ ++++
Sbjct: 11 WFWLSLGGLLLAAEMLGASGYLLWSGVSAVVVGAIVWLLPQLAWEWQGVIFAVLTVVVAY 70
Query: 72 IWWRYQHGKDQIDQSKS-VLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQG-RDL 129
+WW + + S S VLNQR+ +IG + + NG+GR GD++WR Q DL
Sbjct: 71 LWWYWLRQRPAAASSGSQVLNQRNRQLIGTRATLTEPMHNGMGRINIGDSSWRAQASEDL 130
Query: 130 AVNDIVEVVSVDSITLKVKKI 150
AV VEV++V+ ITL ++ I
Sbjct: 131 AVGTEVEVIAVEGITLVIRAI 151
>gi|90577666|ref|ZP_01233477.1| hypothetical protein VAS14_11484 [Vibrio angustum S14]
gi|90440752|gb|EAS65932.1| hypothetical protein VAS14_11484 [Vibrio angustum S14]
Length = 150
Score = 73.9 bits (180), Expect = 2e-12, Method: Composition-based stats.
Identities = 59/147 (40%), Positives = 83/147 (56%), Gaps = 2/147 (1%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIY 62
++ L WHW+ LG +LL+ E++ +LLW G++A++V ++ +P + S +
Sbjct: 2 IDLLEQMNFWHWIALGLVLLLLELLGTAGYLLWLGISAVLVGVLLIMLP-VSWSLQWFCF 60
Query: 63 AVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTW 122
AV A+ + +WWRYQH KD+ D S S LNQR MIG KV G GR GDTTW
Sbjct: 61 AVFALFTTWLWWRYQHKKDKTDASVSKLNQRGAQMIGQVIKVEKAMNAGNGRLQLGDTTW 120
Query: 123 RIQGR-DLAVNDIVEVVSVDSITLKVK 148
++ DL V VV V+ ITL VK
Sbjct: 121 SVKTDVDLVEGQKVVVVDVEGITLIVK 147
>gi|90426315|ref|YP_534685.1| protein of unknown function DUF107 [Rhodopseudomonas palustris
BisB18]
gi|90108329|gb|ABD90366.1| protein of unknown function DUF107 [Rhodopseudomonas palustris
BisB18]
Length = 147
Score = 73.2 bits (178), Expect = 4e-12, Method: Composition-based stats.
Identities = 50/145 (34%), Positives = 79/145 (54%), Gaps = 8/145 (5%)
Query: 6 LADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVI 65
L G W+WLI+GF+L+ E++ PGVFL W GLAA++V G + F+ A + +A+
Sbjct: 5 LVSLGSWNWLIVGFVLMGLELMAPGVFLFWLGLAALLVGG-LSFVTEPSWQAQILAFALF 63
Query: 66 AIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAE---NGIGRGAFGDTTW 122
+I +W R+ + + S LN+R A++ G+VLT+ + +G G DT W
Sbjct: 64 SISAVPLWRRFARPRPG-EGSNPFLNKRAEALV---GRVLTLEKPIVDGAGTLRIDDTVW 119
Query: 123 RIQGRDLAVNDIVEVVSVDSITLKV 147
R+ G D V++V D +L V
Sbjct: 120 RVSGPDAPAGSKVKIVEADGASLTV 144
>gi|50120134|ref|YP_049301.1| hypothetical protein ECA1195 [Erwinia carotovora subsp. atroseptica
SCRI1043]
gi|49610660|emb|CAG74105.1| putative membrane protein [Erwinia carotovora subsp. atroseptica
SCRI1043]
Length = 151
Score = 72.8 bits (177), Expect = 6e-12, Method: Composition-based stats.
Identities = 55/151 (36%), Positives = 90/151 (59%), Gaps = 3/151 (1%)
Query: 1 LGMEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAV 60
+G+E + + W WL LG +LL AE++ +LLW GL+A++V G++ +I L
Sbjct: 1 MGIELVMENAHWFWLSLGGLLLAAEMLGGSGYLLWSGLSAVLV-GLLTWIMPLGWPWQGT 59
Query: 61 IYAVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDT 120
I+A++ I+ +++WW Y K + + S LNQR ++G++ V NG GR GD+
Sbjct: 60 IFAILTIVTALLWW-YWLRKRTLSRPPSTLNQRGQQLVGLRATVSESVTNGFGRVNIGDS 118
Query: 121 TWRIQG-RDLAVNDIVEVVSVDSITLKVKKI 150
+WR++ +DL VEV++VD ITL V+ I
Sbjct: 119 SWRVKSEQDLPAGTHVEVIAVDGITLHVRSI 149
>gi|15891177|ref|NP_356849.1| hypothetical protein AGR_L_2125 [Agrobacterium tumefaciens str.
C58]
gi|17937478|ref|NP_534267.1| hypothetical protein Atu3773 [Agrobacterium tumefaciens str. C58]
gi|15159531|gb|AAK89634.1| AGR_L_2125p [Agrobacterium tumefaciens str. C58]
gi|17742201|gb|AAL44583.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 154
Score = 72.4 bits (176), Expect = 7e-12, Method: Composition-based stats.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 4/144 (2%)
Query: 10 GVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALA---VIYAVIA 66
G W W I+GF+LL AE++ PGVFL+W GLAA+V+ + F A V++A ++
Sbjct: 10 GPWSWWIVGFVLLAAELIAPGVFLIWIGLAALVIGVVSLFFWEAAFWAWQLQLVLFAALS 69
Query: 67 IILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQG 126
++ +++ RY G++ + LNQR+ +++G + G GR DT W + G
Sbjct: 70 VVFALLGRRY-FGRNHATSDEPFLNQREASLVGRTATLQEPIVEGRGRIRLDDTWWPVNG 128
Query: 127 RDLAVNDIVEVVSVDSITLKVKKI 150
DL V + S TL ++ I
Sbjct: 129 EDLPAGTRVRIASARGRTLTIEPI 152
>gi|144898954|emb|CAM75818.1| membrane protein containing DUF107 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 145
Score = 72.0 bits (175), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
WHWLI G +L+ AE ++PG +LLW G+AA + + P+L A I+A + +L+
Sbjct: 6 WHWLIAGILLIGAEAMLPGTYLLWPGIAAFLTGIVAYMAPSLGWEIHAGIFAALT-VLAA 64
Query: 72 IWWRYQHGKDQIDQSKS-VLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQGRDLA 130
+ R + + + S + +LN+R ++G + T +G GR GD TW++ G DL
Sbjct: 65 VGGRKLYARLKTPASDAPLLNKRAAQLVGTIHTLDTPILDGYGRMRLGDATWKVSGPDLP 124
Query: 131 VNDIVEVVSVDSITLKVK 148
V V+ + I L+V+
Sbjct: 125 TGSRVRVIGAEGIILRVE 142
>gi|59713350|ref|YP_206125.1| hypothetical protein VFA0167 [Vibrio fischeri ES114]
gi|59481598|gb|AAW87237.1| hypothetical protein VFA0167 [Vibrio fischeri ES114]
Length = 150
Score = 71.6 bits (174), Expect = 1e-11, Method: Composition-based stats.
Identities = 53/149 (35%), Positives = 78/149 (52%), Gaps = 2/149 (1%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIY 62
ME+ WHWL LG +LL E++ + LW GL+A+ V + IP L + +
Sbjct: 1 MEFFEQMNHWHWLTLGLLLLAGELLGTAGYFLWIGLSAVAVGALYAVIP-LSWQMQWISF 59
Query: 63 AVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTW 122
AV ++ + +WWRYQH KD +K LNQ+D +IG ++ G R GDTTW
Sbjct: 60 AVFSLFTTWLWWRYQHKKDISSDAKRALNQKDKQLIGQTSRLEEDIHAGSCRIVLGDTTW 119
Query: 123 RIQGR-DLAVNDIVEVVSVDSITLKVKKI 150
+ D+ +V VVSVD I L ++ +
Sbjct: 120 SAKSAVDIEKGTLVRVVSVDGIILTIEPV 148
>gi|146309318|ref|YP_001189783.1| protein of unknown function DUF107 [Pseudomonas mendocina ymp]
gi|145577519|gb|ABP87051.1| protein of unknown function DUF107 [Pseudomonas mendocina ymp]
Length = 149
Score = 71.2 bits (173), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 1/147 (0%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIY 62
+ +L W WL L +LLI EV G +LLW GLAA V + P LP ++
Sbjct: 2 IHYLQHLSFWDWLALATVLLILEVFGAGGYLLWIGLAAACVGVLTYLFPELPWVWQFFLF 61
Query: 63 AVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTW 122
++AI+ +++WWR Q + + LN+R ++G + + G G+ GD+ W
Sbjct: 62 GLLAILTAVVWWRRQRSMLR-PSDQPGLNRRGSELLGRRFALHEPIVGGRGKIKAGDSLW 120
Query: 123 RIQGRDLAVNDIVEVVSVDSITLKVKK 149
+ G DL V V+VV+ D + L+V++
Sbjct: 121 LVSGPDLPVGSQVKVVAQDGVILRVEQ 147
>gi|13472655|ref|NP_104222.1| hypothetical protein mlr3022 [Mesorhizobium loti MAFF303099]
gi|14023402|dbj|BAB50008.1| mlr3022 [Mesorhizobium loti MAFF303099]
Length = 154
Score = 70.9 bits (172), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 79/145 (54%), Gaps = 4/145 (2%)
Query: 6 LADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAV---IY 62
+++ G W+W++LGF+LL+ E++ PG+F+LW G+AA+++ + I + V +
Sbjct: 6 ISELGPWNWMVLGFVLLVMEIIAPGIFMLWIGIAALIIGAVSLLIWDAAIWTWQVQVLAF 65
Query: 63 AVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTW 122
++++ + + + G+DQ + +LN+R M+G + ++G GR GDT W
Sbjct: 66 LALSLVSAYVGKKLMGGRDQ-PTDQPLLNRRGAQMVGRMATLAEPIKDGRGRIKLGDTLW 124
Query: 123 RIQGRDLAVNDIVEVVSVDSITLKV 147
R+ G DL V V S L++
Sbjct: 125 RVSGPDLPAGTQVRVTSAADTDLEL 149
>gi|156973613|ref|YP_001444520.1| hypothetical protein VIBHAR_01316 [Vibrio harveyi ATCC BAA-1116]
gi|156525207|gb|ABU70293.1| hypothetical protein VIBHAR_01316 [Vibrio harveyi ATCC BAA-1116]
Length = 153
Score = 70.9 bits (172), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 8/143 (5%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
WHW+ G LL E++ + LW GL+A++V I+ F+P + + +A +++ +
Sbjct: 13 WHWIAFGLALLAVELLGTAGYFLWLGLSALIVGAILSFLP-ISWQMQWLAFAAFSLVTTW 71
Query: 72 IWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAEN---GIGRGAFGDTTWRIQGR- 127
+WWR Q KD+ LNQ+ +I G ++T+ E+ G+ R DTTW +
Sbjct: 72 LWWRKQWSKDRKSDKARDLNQKHKQLI---GNIVTLKEDFTVGMNRLRVADTTWSAESEH 128
Query: 128 DLAVNDIVEVVSVDSITLKVKKI 150
DL VE+V+V+ I LK+K +
Sbjct: 129 DLPAGTRVEIVAVEGIILKIKPV 151
>gi|153834073|ref|ZP_01986740.1| membrane protein [Vibrio harveyi HY01]
gi|148869538|gb|EDL68533.1| membrane protein [Vibrio harveyi HY01]
Length = 153
Score = 70.9 bits (172), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 8/143 (5%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
WHW+ G LL E++ + LW GL+A++V I+ F+P + + +A +++ +
Sbjct: 13 WHWIAFGLALLAVELLGTAGYFLWLGLSALIVGAILSFLP-ISWQMQWLAFAAFSLVTTW 71
Query: 72 IWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAEN---GIGRGAFGDTTWRIQGR- 127
+WWR Q KD+ LNQ+ +I G ++T+ E+ G+ R DTTW +
Sbjct: 72 LWWRKQWSKDRKSDKARDLNQKHKQLI---GNIVTLEEDFTVGMNRLRVADTTWSAESEH 128
Query: 128 DLAVNDIVEVVSVDSITLKVKKI 150
DL VE+V+V+ I LK+K +
Sbjct: 129 DLPAGTRVEIVAVEGIILKIKPV 151
>gi|89073672|ref|ZP_01160186.1| hypothetical protein SKA34_11025 [Photobacterium sp. SKA34]
gi|89050447|gb|EAR55939.1| hypothetical protein SKA34_11025 [Photobacterium sp. SKA34]
Length = 149
Score = 69.7 bits (169), Expect = 5e-11, Method: Composition-based stats.
Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 4/148 (2%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIP-ALPLSALAVI 61
++ L WHW+ LG +LL+ E++ +LLW G++A++V ++ +P + PL ++
Sbjct: 2 IDLLEQMNFWHWIALGLVLLLLELLGTAGYLLWLGISAVLVGVLLIMLPVSWPLQWVS-- 59
Query: 62 YAVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTT 121
+AV A+ + +WWRYQH KD+ D S S LNQR MIG V G GR GDTT
Sbjct: 60 FAVFALFTTWLWWRYQHKKDKTDASVSKLNQRGAQMIGQIITVEKAMIAGNGRLQLGDTT 119
Query: 122 WRIQGR-DLAVNDIVEVVSVDSITLKVK 148
W ++ DL V VV V+ ITL +K
Sbjct: 120 WSVKTDVDLVKGQKVVVVDVEGITLIIK 147
>gi|54302698|ref|YP_132691.1| hypothetical protein PBPRB1019 [Photobacterium profundum SS9]
gi|46916122|emb|CAG22891.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 152
Score = 68.2 bits (165), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 4/139 (2%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIP-ALPLSALAVIYAVIAIILS 70
WHW+ G LL+ E++ +LLW G++A++V ++ F+P + PL L +AV ++
Sbjct: 11 WHWVAFGLALLLLELLGTAGYLLWLGVSAVLVGLLLSFLPLSWPLQWLT--FAVFSLFTM 68
Query: 71 IIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQGR-DL 129
+WWRYQH KD+I+ LN+R +IG + G GR GDTTW ++ L
Sbjct: 69 WLWWRYQHKKDRIEDEGRTLNKRSEQLIGQVSVLDEPLAAGTGRMRLGDTTWLVRTDVAL 128
Query: 130 AVNDIVEVVSVDSITLKVK 148
+VEV+ VD I L ++
Sbjct: 129 EAGVLVEVIDVDGIMLIIQ 147
>gi|116184499|ref|ZP_01474434.1| hypothetical protein VEx2w_02002965 [Vibrio sp. Ex25]
Length = 153
Score = 65.9 bits (159), Expect = 7e-10, Method: Composition-based stats.
Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 8/141 (5%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
WHWL GF LL E++ + LW G++A++V +M +P + + +A ++I +
Sbjct: 13 WHWLAFGFALLAVELLGTAGYFLWLGVSALIVGALMTVLP-MSWQLQWLCFASFSLITTW 71
Query: 72 IWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAEN---GIGRGAFGDTTWRIQG-R 127
+WWR Q KD+ + + LNQ+ +I G+ LTI E+ G+ R DTTW Q +
Sbjct: 72 LWWRRQWSKDKKEDQERDLNQKYKQLI---GRTLTIEEDFSVGLNRIKVADTTWSAQSDQ 128
Query: 128 DLAVNDIVEVVSVDSITLKVK 148
L V++ +D I L ++
Sbjct: 129 ALPAGTRVKIKDIDGIILIIE 149
>gi|27382860|ref|NP_774389.1| hypothetical protein bll7749 [Bradyrhizobium japonicum USDA 110]
gi|27356033|dbj|BAC53014.1| bll7749 [Bradyrhizobium japonicum USDA 110]
Length = 147
Score = 65.5 bits (158), Expect = 9e-10, Method: Composition-based stats.
Identities = 50/138 (36%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 10 GVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIIL 69
G W+WLI FIL+ E + PGVFL W GLAA++V I F L V++A+ A
Sbjct: 9 GTWNWLIFAFILMALETIAPGVFLFWLGLAALLVGLI-SFAVHLSWQTQLVMFAIFAAAA 67
Query: 70 SIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQGRDL 129
+W R + S LN+R A++G + + +G G GDT WR+ G D
Sbjct: 68 VPVWRRLARPRPDASAS-PFLNKRTEALLGREFTLEKPIVDGNGTMRIGDTVWRVAGPDT 126
Query: 130 AVNDIVEVVSVDSITLKV 147
V+VV VD + L V
Sbjct: 127 PAGTRVKVVQVDGVNLTV 144
>gi|90414646|ref|ZP_01222618.1| hypothetical protein P3TCK_09278 [Photobacterium profundum 3TCK]
gi|90324279|gb|EAS40851.1| hypothetical protein P3TCK_09278 [Photobacterium profundum 3TCK]
Length = 152
Score = 65.1 bits (157), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
WHW+ G LL+ E++ +LLW G++A++V ++ F+P L S + +AV ++ +
Sbjct: 11 WHWVAFGLALLLLELLGTAGYLLWLGVSAVLVGLLLSFLP-LSWSLQWLTFAVFSLFTTW 69
Query: 72 IWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQGR-DLA 130
+WWRYQ KD+ + LN+R +IG + G GR GDTTW ++ L
Sbjct: 70 LWWRYQSKKDRAEDEGRTLNKRSEQLIGQVSVLDKPLAAGTGRMRLGDTTWLVRTDVALE 129
Query: 131 VNDIVEVVSVDSITLKVK 148
+VEV+ VD I L ++
Sbjct: 130 AGVLVEVIDVDGIMLIIQ 147
>gi|148265459|ref|YP_001232165.1| protein of unknown function DUF107 [Geobacter uraniumreducens Rf4]
gi|146398959|gb|ABQ27592.1| protein of unknown function DUF107 [Geobacter uraniumreducens Rf4]
Length = 152
Score = 65.1 bits (157), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 13/146 (8%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
WHWL++G +L+ E+V+P ++W+GL A++V +M F P PL A + + V++ +L+I
Sbjct: 6 WHWLVVGMVLIGLELVVPSFTIIWFGLGAVLVGIVMVFAPGYPLPAQILTWTVVSAVLTI 65
Query: 72 IWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGA-------FGDTTWRI 124
W+R+ + + +K+ A++G G V+ AE RG G W
Sbjct: 66 AWFRFFNPR----SNKTFSGSAKGAVVGETGLVIRAAEP-YARGTVKFQLPLLGADEWPC 120
Query: 125 QGRD-LAVNDIVEVVSVDSITLKVKK 149
+ L V D V++V V+ +KV+K
Sbjct: 121 MAEESLKVGDRVKIVDVEGHVMKVEK 146
>gi|89095200|ref|ZP_01168124.1| hypothetical protein MED92_08590 [Oceanospirillum sp. MED92]
gi|89080558|gb|EAR59806.1| hypothetical protein MED92_08590 [Oceanospirillum sp. MED92]
Length = 149
Score = 65.1 bits (157), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 2/149 (1%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIY 62
+E+ WHW+IL ILL E + F++ ++A +VAG M +++
Sbjct: 2 LEFFQSISFWHWIILALILLGGEALGAAGFMIGVSISAFIVAGSMALGVLNDWQHQFLLF 61
Query: 63 AVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTW 122
A+ ++I S+I WR+ + + D ++ ++N R +IG + + ENG GR GDT W
Sbjct: 62 ALFSVIASVIVWRFFKHRGEHDGAE-MINDRAAQLIGRKLTLSENMENGRGRVQIGDTFW 120
Query: 123 RIQG-RDLAVNDIVEVVSVDSITLKVKKI 150
++ D VEVVS + + L+++KI
Sbjct: 121 KVAADEDYESGTRVEVVSTEGMLLQIQKI 149
>gi|86359149|ref|YP_471041.1| hypothetical protein RHE_CH03558 [Rhizobium etli CFN 42]
gi|86283251|gb|ABC92314.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 151
Score = 65.1 bits (157), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 6 LADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPL---SALAVIY 62
+A+ G W+W + G +LL AE+++PG FL+W GLAA++V + A+++
Sbjct: 6 IAELGPWNWWVTGLVLLAAEMIVPGFFLVWIGLAALIVGALSLLFWDSAFWIWEIQAILF 65
Query: 63 AVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTW 122
A++A+ + R + D+ LNQR +++G + G GR DT W
Sbjct: 66 ALLAVATTFAGRRLTLRNAETDE--PFLNQRGASLVGRTATLQEPIREGRGRIRLDDTLW 123
Query: 123 RIQGRDLAVNDIVEVVSVDSITLKVKKI 150
++ G DL V V+V+S L+V+ +
Sbjct: 124 QVMGPDLPVGTQVKVISCHGRDLRVEPV 151
>gi|40063314|gb|AAR38132.1| conserved hypothetical protein [uncultured bacterium 578]
Length = 145
Score = 65.1 bits (157), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/136 (34%), Positives = 77/136 (56%), Gaps = 5/136 (3%)
Query: 13 HWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSII 72
HWL+LG L+I E+ + VFLLW G +AI V+ I + + +I+ +I+I ++ +
Sbjct: 12 HWLVLGLALVIIELFLWSVFLLWIGASAITVSIIFYLASSTSGAMQLLIFVLISISVTYL 71
Query: 73 WWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQGRDLAVN 132
+Y K D+ LN + + IG + +V++I +NGI + G + W +G DL V
Sbjct: 72 AMKYYPIKTVDDE----LNNKAKSHIGKECEVMSI-KNGIAKVQIGKSLWFAKGLDLNVG 126
Query: 133 DIVEVVSVDSITLKVK 148
IV++V V+S T VK
Sbjct: 127 QIVQIVDVESSTFIVK 142
>gi|123443268|ref|YP_001007242.1| hypothetical protein YE3059 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122090229|emb|CAL13095.1| putative membrane protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 149
Score = 64.7 bits (156), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/140 (34%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
W WL LG +LL AE++ ++LW G+AA+VV GI+ ++ V++AV+ ++ +I
Sbjct: 11 WFWLSLGGLLLAAEMLGASGYMLWSGVAAVVV-GILVWLFPFSWEMQGVLFAVLTVVSAI 69
Query: 72 IWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRI-QGRDLA 130
+WW + +I ++LNQR+H ++G + + +G GR GD++WRI +L+
Sbjct: 70 LWWYWL--SKRIKPQPAMLNQRNHQLLGTRATLTEPTVDGYGRMKVGDSSWRIYSANELS 127
Query: 131 VNDIVEVVSVDSITLKVKKI 150
V VEV+ V+ TL V+ +
Sbjct: 128 VGTEVEVILVEGNTLHVRAV 147
>gi|117924743|ref|YP_865360.1| protein of unknown function DUF107 [Magnetococcus sp. MC-1]
gi|117608499|gb|ABK43954.1| protein of unknown function DUF107 [Magnetococcus sp. MC-1]
Length = 148
Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/136 (34%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
W W I+G +L+ E+ + FLLW GL+A VV I P P + V+Y V++++ +I
Sbjct: 11 WAWAIVGLVLIGLEMFVWSTFLLWMGLSAFVVGAIFYVAPDFPWAWSVVLYGVLSLV-AI 69
Query: 72 IWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQGRDLAV 131
R Q D + LN+R M+G V +G G+ GD+ W QG D
Sbjct: 70 YLGRKLFKPAQADDPDA-LNERGQRMVGQSYVVAEAIVHGRGKVRVGDSLWLAQGADCPA 128
Query: 132 NDIVEVVSVDSITLKV 147
+V V SV S TL V
Sbjct: 129 GTVVTVTSVKSTTLMV 144
>gi|91225894|ref|ZP_01260863.1| hypothetical protein V12G01_15550 [Vibrio alginolyticus 12G01]
gi|91189544|gb|EAS75820.1| hypothetical protein V12G01_15550 [Vibrio alginolyticus 12G01]
Length = 153
Score = 63.5 bits (153), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
WHWL GF LL E++ + LW G++A++V IM +P + + +A ++I +
Sbjct: 13 WHWLAFGFALLAVELLGTAGYFLWLGMSALIVGAIMTVLP-MSWQLQWLCFASFSLITTW 71
Query: 72 IWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAEN---GIGRGAFGDTTWRIQG-R 127
+WWR Q KD+ + + LNQ+ +I G+ L + E+ G+ R DTTW Q +
Sbjct: 72 LWWRRQWSKDKQEDQERDLNQKYKQLI---GRTLILEEDFSVGLNRIKVADTTWSAQSDQ 128
Query: 128 DLAVNDIVEVVSVDSITLKVK 148
L V + V+ I L ++
Sbjct: 129 ALPAGTRVRITDVEGIILIIE 149
>gi|39933954|ref|NP_946230.1| hypothetical protein RPA0877 [Rhodopseudomonas palustris CGA009]
gi|39647801|emb|CAE26321.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 149
Score = 63.5 bits (153), Expect = 4e-09, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 4/147 (2%)
Query: 6 LADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFI-PALPLSALAVIYAV 64
L G W+WLILG +L+ E++ PGVFL W GLAA++V + + P L L ++ +
Sbjct: 5 LTALGAWNWLILGLVLMALELLAPGVFLFWLGLAALLVGVLALLLEPGWQLQIL--LFGL 62
Query: 65 IAIILSIIWWRYQHGKD-QIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWR 123
A +W R G D ++ + LN+R A++G + + E G+G DT WR
Sbjct: 63 FAAAAVPLWRRMARGGDVEVHATNPFLNRRTDALVGREFTLEKPIEGGVGTVRIDDTVWR 122
Query: 124 IQGRDLAVNDIVEVVSVDSITLKVKKI 150
+ G D + +V+ D +TL V +
Sbjct: 123 VSGPDTPAGSRIRIVAADGVTLTVAAL 149
>gi|116253815|ref|YP_769653.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115258463|emb|CAK09567.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 151
Score = 63.2 bits (152), Expect = 5e-09, Method: Composition-based stats.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 5/148 (3%)
Query: 6 LADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAG--IMKFIPALPLSAL-AVIY 62
+A+ G W W + G +LL AE+++PG FL+W GLAA++V ++ + A + L A+++
Sbjct: 6 VAELGPWSWWVAGLVLLAAEMIVPGFFLVWIGLAALIVGALSLLFWDSAFWVWELQAILF 65
Query: 63 AVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTW 122
A++A+ + R D+ LNQR +++G + G GR DT W
Sbjct: 66 ALLAVATTFAGRRLTLRNATTDE--PFLNQRGASLVGRTATLHEPIREGRGRIRLDDTLW 123
Query: 123 RIQGRDLAVNDIVEVVSVDSITLKVKKI 150
++ G DL V V+VVS + L V+ +
Sbjct: 124 QVMGPDLPVGTQVKVVSSNGRDLTVEPV 151
>gi|86751638|ref|YP_488134.1| Protein of unknown function DUF107 [Rhodopseudomonas palustris
HaA2]
gi|86574666|gb|ABD09223.1| Protein of unknown function DUF107 [Rhodopseudomonas palustris
HaA2]
Length = 153
Score = 62.8 bits (151), Expect = 6e-09, Method: Composition-based stats.
Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 4 EWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKF----IPALPLSALA 59
E G W+WLI+GF+L+ E++ PG+FL W G+AA+ + G+ F + AL A A
Sbjct: 3 ELFVALGSWNWLIVGFVLMALELLAPGIFLFWLGVAAL-LTGVATFALASVLALSWQAQA 61
Query: 60 VIYAVIAIILSIIWWRY-QHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFG 118
+++A +A+ +W R + G + + LN+R A++G + E G+G
Sbjct: 62 LLFAALAVAAVPLWRRMARGGAAESSTTNPFLNRRSDALVGRVFTLEKPIEGGVGTVRID 121
Query: 119 DTTWRIQGRDLAVNDIVEVVSVDSITLKVKKI 150
DT WR+ G D V++V D + L V +
Sbjct: 122 DTFWRVTGPDAPAGSRVKIVHADGVNLTVAGV 153
>gi|145300401|ref|YP_001143242.1| hypothetical protein ASA_3526 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142853173|gb|ABO91494.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 151
Score = 62.0 bits (149), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
WHWL LGFILL EV+ FLLW G+AA+ V ++ P A +++AV +++ +
Sbjct: 11 WHWLGLGFILLAIEVLGSVGFLLWTGIAALEVGLLLLLWP-FGWQAQLLLFAVQSLLTTW 69
Query: 72 IWWRYQHGKDQIDQSKSV-LNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQGR-DL 129
WWR+QH +D+ + + +N+R +G + +L G+ R DT W ++ + L
Sbjct: 70 AWWRWQHKRDRSGRDAAAPINERMQGYVGRELVLLDDVVQGLSRVHLDDTVWTVRSQMPL 129
Query: 130 AVNDIVEVVSVDSITLKVKKI 150
V+VV DS L V+ +
Sbjct: 130 TAGSRVKVVGTDSHILLVEPL 150
>gi|77974246|ref|ZP_00829787.1| COG1585: Membrane protein implicated in regulation of membrane
protease activity [Yersinia frederiksenii ATCC 33641]
Length = 150
Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/140 (33%), Positives = 82/140 (58%), Gaps = 4/140 (2%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
W WL LG +LL AE++ ++LW G+AA+VV GI+ ++ V+++V+ ++ +I
Sbjct: 11 WFWLSLGGLLLAAEMLGASGYMLWSGVAAVVV-GILVWLFPFSWEMQGVLFSVLTVVSAI 69
Query: 72 IWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRI-QGRDLA 130
+WW + +I ++LNQR+H ++G + + +G GR GD++WRI +L+
Sbjct: 70 LWWYWL--SKRIKPQPAMLNQRNHQLLGTRATLTEATVDGYGRMKVGDSSWRIYSAIELS 127
Query: 131 VNDIVEVVSVDSITLKVKKI 150
VEV+ V+ TL V+ I
Sbjct: 128 AGTEVEVILVEGNTLHVRPI 147
>gi|70733234|ref|YP_263007.1| hypothetical protein PFL_5949 [Pseudomonas fluorescens Pf-5]
gi|68347533|gb|AAY95139.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
Length = 149
Score = 61.2 bits (147), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/139 (33%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
W WL LG ILLI EV G +LLW GLAA +V + IP L +++ +++++ ++
Sbjct: 11 WDWLALGTILLIFEVFGAGGYLLWIGLAAAIVGVLTFLIPGLSWEVQFLLFGLLSVLTAL 70
Query: 72 IWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQGRDLAV 131
WWR Q + + LN R +IG V +G GR D W +G D V
Sbjct: 71 YWWRRQRSVVRPSDQPN-LNLRGQELIGKTFVVHQAIVDGRGRIKVADGVWIAKGADAPV 129
Query: 132 NDIVEVVSVDSITLKVKKI 150
V VV + L V+ +
Sbjct: 130 GARVRVVGQEGAILLVENL 148
>gi|85375743|ref|YP_459805.1| hypothetical protein ELI_14580 [Erythrobacter litoralis HTCC2594]
gi|84788826|gb|ABC65008.1| hypothetical protein ELI_14580 [Erythrobacter litoralis HTCC2594]
Length = 156
Score = 60.5 bits (145), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 6/141 (4%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFI--PALPLSALAVIYAVIAIIL 69
W W+I+G +L E+++PGV+L+W +AA+ + G++ F+ P LPL + ++ IA+I
Sbjct: 9 WVWVIIGLVLAALEILVPGVYLIWLAVAAL-LTGLLTFVFDPGLPLQIVNFVF--IALIA 65
Query: 70 SIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQGRDL 129
+ R + I + ++N+R ++G V+ E G GR GD W +G DL
Sbjct: 66 AFSAKRILRDR-PIASADPLMNKRGGRLVGETAIVVQAFEGGTGRIHIGDGDWLAKGVDL 124
Query: 130 AVNDIVEVVSVDSITLKVKKI 150
+ + V V + L V+ +
Sbjct: 125 EIGERVRVTGHEGAILLVEPM 145
>gi|103487697|ref|YP_617258.1| protein of unknown function DUF107 [Sphingopyxis alaskensis RB2256]
gi|98977774|gb|ABF53925.1| protein of unknown function DUF107 [Sphingopyxis alaskensis RB2256]
Length = 148
Score = 60.5 bits (145), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/137 (35%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
W WL LG +L AE+V PG FL+W G AAI V G++ ++ L + I+A+++ + ++
Sbjct: 12 WAWLSLGVLLAAAEIVAPGFFLIWIGAAAI-VTGVIAWVVPLSVPFQLGIFALLSFV-AL 69
Query: 72 IWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQGRDLAV 131
R + I + LNQR ++G V E+G GR GD W ++G D A
Sbjct: 70 YGGRRWLRMNPITTTDPHLNQRGGRLVGEVLTVTKAIEDGRGRVRVGDGEWPVRGPDAAE 129
Query: 132 NDIVEVVSVDSITLKVK 148
V VVS D L V+
Sbjct: 130 GAKVRVVSADGGVLVVE 146
>gi|153826193|ref|ZP_01978860.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|149740053|gb|EDM54222.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
Length = 189
Score = 59.3 bits (142), Expect = 8e-08, Method: Composition-based stats.
Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIY 62
+E L+ WHWL LG +LL AE++ + LW GL+A++V ++ +P L L + +
Sbjct: 42 VELLSQLNFWHWLALGLLLLAAELLGTAGYFLWLGLSALLVGVLLAVMP-LGLQLQWLAF 100
Query: 63 AVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTW 122
A +++ + +WWR Q +D+ ++ LNQ++ ++G + G + GDT W
Sbjct: 101 ASFSLVTTWLWWRRQFSRDKKQDTERDLNQKEKQLLGRIIPITQDTPAGEFQVTLGDTAW 160
Query: 123 RIQ-GRDLAVNDIVEVVSVDSITLKVKKI 150
+ + LA V VV+VD I L V+ I
Sbjct: 161 TARCDQQLAAGSRVSVVAVDGIILVVQPI 189
>gi|15807136|ref|NP_295865.1| hypothetical protein DR_2142 [Deinococcus radiodurans R1]
gi|6459935|gb|AAF11686.1|AE002048_6 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 159
Score = 58.9 bits (141), Expect = 8e-08, Method: Composition-based stats.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 3/149 (2%)
Query: 4 EWLADWGV---WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAV 60
+WL W WHW + G +LLI E++ PGVF +W L+A V + +P L + +
Sbjct: 3 DWLPTWQAVHPWHWWVFGALLLILEILAPGVFFVWLALSAFGVGLLTFVLPFLDVPGQLL 62
Query: 61 IYAVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDT 120
++A +++ + RY LN +IG V+T E+G+GR GD+
Sbjct: 63 LFAGLSVAAVWLGRRYVSRLVLGGSEGEQLNTGAQRLIGRTVTVVTPIEHGVGRVRVGDS 122
Query: 121 TWRIQGRDLAVNDIVEVVSVDSITLKVKK 149
WR +G +L V +V V+ TL V++
Sbjct: 123 DWRARGPELPAGTPVRIVGVEGATLVVQE 151
>gi|149184921|ref|ZP_01863238.1| hypothetical protein ED21_17747 [Erythrobacter sp. SD-21]
gi|148831032|gb|EDL49466.1| hypothetical protein ED21_17747 [Erythrobacter sp. SD-21]
Length = 147
Score = 58.5 bits (140), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 5/150 (3%)
Query: 3 MEWLADWG-VWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIP-ALPLSALAV 60
MEW W WL LG L AE+++PG FL+W AA++ + +P A+PL
Sbjct: 1 MEWWNSLDPFWVWLALGLFLAGAEILVPGFFLMWLAGAALLTGIVAFLMPGAIPLQ--VT 58
Query: 61 IYAVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDT 120
++A+++I+ I Y + I ++ +N+R + G V++ G GR GD+
Sbjct: 59 VFAILSIVAVFIGRNYFR-SNPILEADPKMNRRGMRLAGEIATVVSPINGGTGRVKHGDS 117
Query: 121 TWRIQGRDLAVNDIVEVVSVDSITLKVKKI 150
W +G + AV D V + D L V+ +
Sbjct: 118 EWLAKGCEAAVGDRVRISGSDGAVLIVEPL 147
>gi|148982033|ref|ZP_01816594.1| hypothetical protein VSWAT3_14762 [Vibrionales bacterium SWAT-3]
gi|145960672|gb|EDK26017.1| hypothetical protein VSWAT3_14762 [Vibrionales bacterium SWAT-3]
Length = 151
Score = 58.5 bits (140), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIY 62
+E L WHWL G LL E+V + LW G++A++V ++ +P + + +
Sbjct: 2 VELLEQVNHWHWLAFGLALLALELVGTAGYFLWIGISAMLVGALLGALP-IGWQMQWLSF 60
Query: 63 AVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTW 122
A ++I + +WWR Q D+ S LNQR+ ++G ++ T + G R GDTTW
Sbjct: 61 ASFSLITTWLWWRRQLSSDKRSDSNRELNQREKQLVGQTARIDTDIQKGKCRIRLGDTTW 120
Query: 123 R-IQGRDLAVNDIVEVVSVDSITLKV 147
+ DL V V +VD I L +
Sbjct: 121 SAVSSHDLKAGTEVVVTAVDGIVLTI 146
>gi|114706194|ref|ZP_01439097.1| hypothetical protein FP2506_17049 [Fulvimarina pelagi HTCC2506]
gi|114539040|gb|EAU42161.1| hypothetical protein FP2506_17049 [Fulvimarina pelagi HTCC2506]
Length = 156
Score = 58.2 bits (139), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 14/144 (9%)
Query: 14 WLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIP------ALPLSALAVIYAVIAI 67
W I GF+LL E+ PGV+LL++GLAA+VV F+P + L A A + A AI
Sbjct: 11 WWIAGFLLLALELASPGVYLLFFGLAALVVGTNAFFLPDSLFGISQQLIAFATVSAA-AI 69
Query: 68 ILSIIWWRYQHGK-DQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQG 126
L W+R GK D++ + + ++G + + +G GR GD+ W ++G
Sbjct: 70 YLGGRWYRSSRGKGDEMPDNPA------RRLVGRETVLTEAITSGRGRAKIGDSWWTVEG 123
Query: 127 RDLAVNDIVEVVSVDSITLKVKKI 150
DL V + +V + L V+ +
Sbjct: 124 PDLPEGTRVRIHAVSANILSVEPV 147
>gi|16123261|ref|NP_406574.1| hypothetical protein YPO3084 [Yersinia pestis CO92]
gi|22124999|ref|NP_668422.1| hypothetical protein y1095 [Yersinia pestis KIM]
gi|45440683|ref|NP_992222.1| hypothetical protein YP_0840 [Yersinia pestis biovar Microtus str.
91001]
gi|51595373|ref|YP_069564.1| hypothetical protein YPTB1024 [Yersinia pseudotuberculosis IP
32953]
gi|77634169|ref|ZP_00796276.1| COG1585: Membrane protein implicated in regulation of membrane
protease activity [Yersinia pestis Angola]
gi|89103587|ref|ZP_01176158.1| COG1585: Membrane protein implicated in regulation of membrane
protease activity [Yersinia pestis biovar Orientalis
str. IP275]
gi|108808571|ref|YP_652487.1| hypothetical protein YPA_2579 [Yersinia pestis Antiqua]
gi|108811170|ref|YP_646937.1| membrane protein [Yersinia pestis Nepal516]
gi|145599983|ref|YP_001164059.1| membrane protein [Yersinia pestis Pestoides F]
gi|149365055|ref|ZP_01887090.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|153950019|ref|YP_001401985.1| nodulation efficiency protein D [Yersinia pseudotuberculosis IP
31758]
gi|21957845|gb|AAM84673.1|AE013713_2 hypothetical protein y1095 [Yersinia pestis KIM]
gi|45435541|gb|AAS61099.1| putative membrane protein [Yersinia pestis biovar Microtus str.
91001]
gi|51588655|emb|CAH20264.1| putative membrane protein [Yersinia pseudotuberculosis IP 32953]
gi|108774818|gb|ABG17337.1| membrane protein [Yersinia pestis Nepal516]
gi|108780484|gb|ABG14542.1| putative membrane protein [Yersinia pestis Antiqua]
gi|115348740|emb|CAL21686.1| putative membrane protein [Yersinia pestis CO92]
gi|145211679|gb|ABP41086.1| membrane protein [Yersinia pestis Pestoides F]
gi|149291468|gb|EDM41542.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|152961514|gb|ABS48975.1| nodulation efficiency protein D [Yersinia pseudotuberculosis IP
31758]
Length = 149
Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 81/140 (57%), Gaps = 4/140 (2%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
W WL LG +LL AE++ +LLW G+AA++V G++ ++ V+++++ ++ +
Sbjct: 11 WFWLSLGGLLLAAEMLGASGYLLWSGIAAVLV-GVLVWLFPFSWEMQGVLFSILTVVSAF 69
Query: 72 IWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQ-GRDLA 130
+WW + + + ++LNQR+H ++G++ + +G GR GD++WRI +L
Sbjct: 70 LWWYWLSKRTK--PQPAMLNQRNHQLLGIRATLTEPTVDGYGRMKVGDSSWRIYCATELN 127
Query: 131 VNDIVEVVSVDSITLKVKKI 150
VEV+ V+ TL V+ +
Sbjct: 128 PGTEVEVILVEGNTLHVRAV 147
>gi|148252915|ref|YP_001237500.1| putative membrane protein of unknown function [Bradyrhizobium sp.
BTAi1]
gi|146405088|gb|ABQ33594.1| putative membrane protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 148
Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/139 (33%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Query: 10 GVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGI-MKFIPALPLSALAVIYAVIAII 68
G W+WLI G IL+ E++ PGVFL W GLAA++V + F P L L ++A+ AI
Sbjct: 9 GTWNWLIFGIILMALELLAPGVFLFWLGLAALLVGLLSFAFAPGWQLQIL--MFALFAIA 66
Query: 69 LSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQGRD 128
+W R LN+R A++G + + +G G DT WR+ G D
Sbjct: 67 AVPLWRRLARTGAAAASDNPYLNRRSAALVGREFTLEKPIIDGNGTVRIDDTVWRVAGPD 126
Query: 129 LAVNDIVEVVSVDSITLKV 147
V +V D L V
Sbjct: 127 APAGSRVRIVQADGAHLTV 145
>gi|91975343|ref|YP_568002.1| protein of unknown function DUF107 [Rhodopseudomonas palustris
BisB5]
gi|91681799|gb|ABE38101.1| protein of unknown function DUF107 [Rhodopseudomonas palustris
BisB5]
Length = 149
Score = 57.0 bits (136), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 76/146 (52%), Gaps = 2/146 (1%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIY 62
++ L G W+WLI+GF+L+ E++ PG+F L+W A +++G+ F L +++
Sbjct: 2 LDMLGALGPWNWLIIGFVLMALELLAPGIF-LFWLGLAALLSGLAAFALHLSWQLQILLF 60
Query: 63 AVIAIILSIIWWRY-QHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTT 121
A+ A+ +W R + G + + + LN+R A++G + +G+G DT
Sbjct: 61 ALFAVAAVPLWRRMARGGAAESNATNPFLNRRADALVGRIFTLEKPIVDGVGTVRIDDTF 120
Query: 122 WRIQGRDLAVNDIVEVVSVDSITLKV 147
WR+ G D V++V D + L V
Sbjct: 121 WRVTGPDAPAGSRVKIVQADGVNLTV 146
>gi|84393797|ref|ZP_00992544.1| hypothetical protein V12B01_21474 [Vibrio splendidus 12B01]
gi|84375594|gb|EAP92494.1| hypothetical protein V12B01_21474 [Vibrio splendidus 12B01]
Length = 151
Score = 57.0 bits (136), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
WHWL G LL E+V + LW G++A++V ++ +P + + +A ++I +
Sbjct: 11 WHWLAFGLALLALELVGTAGYFLWIGISAMLVGALLGALP-IGWQMQWLSFASFSLITTW 69
Query: 72 IWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWR-IQGRDLA 130
+WWR Q D+ + LNQR+ ++G +V T + G R GDTTW + +DL
Sbjct: 70 LWWRRQLSNDKQSDAGRELNQREKQLVGQTTRVDTDIQKGKCRIRLGDTTWSAVSAQDLE 129
Query: 131 VNDIVEVVSVDSITLKV 147
V V +VD I L +
Sbjct: 130 AGTEVIVTAVDGIVLTI 146
>gi|15640991|ref|NP_230622.1| hypothetical protein VC0975 [Vibrio cholerae O1 biovar eltor str.
N16961]
gi|121728140|ref|ZP_01681176.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|153822701|ref|ZP_01975368.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|9655436|gb|AAF94137.1| conserved hypothetical protein [Vibrio cholerae O1 biovar eltor
str. N16961]
gi|121629608|gb|EAX62030.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|126519782|gb|EAZ77005.1| conserved hypothetical protein [Vibrio cholerae B33]
Length = 189
Score = 56.2 bits (134), Expect = 5e-07, Method: Composition-based stats.
Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 2/149 (1%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIY 62
+E L+ WHWL LG +LL AE++ + LW GL+A++V ++ +P L + +
Sbjct: 42 VELLSQLNFWHWLALGLLLLAAELLGTAGYFLWLGLSALLVGVLLAVMP-LGWQLQWLAF 100
Query: 63 AVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTW 122
A +++ + +WWR Q +D+ ++ LNQ++ ++G + G + GDT W
Sbjct: 101 ASFSLVTTWLWWRRQFSRDKKQDTERDLNQKEKQLLGRIIPITQDTPAGEFQVTLGDTAW 160
Query: 123 RIQ-GRDLAVNDIVEVVSVDSITLKVKKI 150
+ + LA V VV+VD I L V+ I
Sbjct: 161 TARCDQQLAAGSRVSVVAVDGIILVVQPI 189
>gi|153875727|ref|ZP_02003398.1| Nodulation efficiency, NfeD [Beggiatoa sp. PS]
gi|152067810|gb|EDN66603.1| Nodulation efficiency, NfeD [Beggiatoa sp. PS]
Length = 174
Score = 56.2 bits (134), Expect = 5e-07, Method: Composition-based stats.
Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVF---LLWWGLAAIVVAGIMKFIPALPLSALA 59
M+ + WHW ++ LL+ E + G F LW +A+ + +M P LPL
Sbjct: 1 MDIFSQINYWHWWVMSISLLMLEFLALGTFGSFFLWPAIASAALGFLMLLFPMLPLQVQV 60
Query: 60 VIYAVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGD 119
+I VI+I+ S++ R GK + Q + LNQR +IG V NG+G+ GD
Sbjct: 61 LILGVISIV-SVVIGRAYLGKHPLSQDQPFLNQRGSELIGHVYVVSDAIVNGVGKITVGD 119
Query: 120 TTWRIQGRDLAVNDIVEVVSVDSITLKVK 148
W ++G D V V+V S + L+V+
Sbjct: 120 GVWIVEGPDCPVGTNVKVTSAGGVRLRVE 148
>gi|146343056|ref|YP_001208104.1| hypothetical protein BRADO6247 [Bradyrhizobium sp. ORS278]
gi|146195862|emb|CAL79889.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 148
Score = 56.2 bits (134), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Query: 10 GVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIIL 69
G W+WLI G IL+ E++ PGVFL +W A ++ G++ F A +++A+ +I
Sbjct: 9 GTWNWLIFGVILMAMELLAPGVFL-FWLGLAALLVGLLSFAVAPGWQLQILLFALFSIAA 67
Query: 70 SIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQGRDL 129
+W R + LN+R A++G + + NG G DT WR+ G D+
Sbjct: 68 VPLWRRLARANAAASEDNPFLNRRSAALVGREFTLEKPIVNGNGTVRIDDTVWRVAGPDI 127
Query: 130 AVNDIVEVVSVDSITLKV 147
V +V D L V
Sbjct: 128 PAGSRVRIVQADGAQLTV 145
>gi|53802721|ref|YP_115498.1| hypothetical protein MCA3111 [Methylococcus capsulatus str. Bath]
gi|53756482|gb|AAU90773.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
Length = 147
Score = 56.2 bits (134), Expect = 6e-07, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
WHW LG +LLI E+++PG++ LW AA++ ++ +P L ++++V+++
Sbjct: 9 WHWWTLGALLLILELLLPGMYFLWMAEAALLTGAVLWLLPGLGWEIQLLVFSVLSLASIF 68
Query: 72 IWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQGRDLAV 131
++ ++ G+ I + +LN+R IG + NG+G+ D+ WR+ G D
Sbjct: 69 VFEKFI-GRKPIVSDRPLLNRRAAQYIGRTLMLEQPIVNGMGKIRIDDSIWRVHGDDCPA 127
Query: 132 NDIVEVVSVDSITLKVKKI 150
+ V VD + LKV+++
Sbjct: 128 GTKIRVCDVDGVILKVERV 146
>gi|86148407|ref|ZP_01066699.1| hypothetical protein MED222_20704 [Vibrio sp. MED222]
gi|85833821|gb|EAQ51987.1| hypothetical protein MED222_20704 [Vibrio sp. MED222]
Length = 151
Score = 55.8 bits (133), Expect = 8e-07, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIY 62
+E L WHWL G LL E++ + LW G++A++V ++ +P + + +
Sbjct: 2 VELLEQVNYWHWLAFGLALLALELIGTAGYFLWIGISAMLVGALLGALP-IGWQMQWLSF 60
Query: 63 AVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTW 122
A ++I + +WWR Q D+ S LNQR+ +IG + ++L + G R GD++W
Sbjct: 61 ASFSLITTWLWWRRQLSSDKQSDSTRDLNQREKQLIGRKTRLLEPVQKGNCRIKLGDSSW 120
Query: 123 R-IQGRDLAVNDIVEVVSVDSITLKV 147
+ D+ + V + +VD I L +
Sbjct: 121 SAMSTHDIDAGEEVVITAVDGIVLTI 146
>gi|118580044|ref|YP_901294.1| protein of unknown function DUF107 [Pelobacter propionicus DSM
2379]
gi|118502754|gb|ABK99236.1| protein of unknown function DUF107 [Pelobacter propionicus DSM
2379]
Length = 147
Score = 55.5 bits (132), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
W+W+I GF+L+ E+++P ++W+GL A+VV + P P++ +++++ ++ +
Sbjct: 6 WYWIIAGFVLIGLELIVPSFTIIWFGLGALVVGLLKAAWPGFPVTGQILLWSIASVCFTT 65
Query: 72 IWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRG-------AFGDTTWRI 124
+W++Y +++ S ++G G ++ ++ G+G G W
Sbjct: 66 LWFKYLKPRNRTHAGMS-----KEGIVGETGIIIRGTDDSYGKGVVRFRISVLGADEWSC 120
Query: 125 QG-RDLAVNDIVEVVSVDSITLKVKKI 150
+ L V D V V ++ LKV KI
Sbjct: 121 YSEQTLHVGDSVRVTDIEGQILKVTKI 147
>gi|90416581|ref|ZP_01224512.1| hypothetical protein GB2207_05247 [marine gamma proteobacterium
HTCC2207]
gi|90331780|gb|EAS47008.1| hypothetical protein GB2207_05247 [marine gamma proteobacterium
HTCC2207]
Length = 150
Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 11/146 (7%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
WHWLILG +L+ E+ IP + W+GL AIVV +M I L +A +I+ V ++ ++
Sbjct: 8 WHWLILGMVLVAGEIFIPSFTIFWFGLGAIVVGLVMTVI-ELSFTAQILIWTVSSVAFTV 66
Query: 72 IWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTI-AENGIGRGAF-----GDTTWRIQ 125
+W++Y K ++ + RD A IG G+V+ E+ G+ F GD W
Sbjct: 67 LWFKY--FKPKMTDRTTAGISRD-AAIGEAGQVIKAPTEHSRGQVRFTTPVLGDDEWDFI 123
Query: 126 GRD-LAVNDIVEVVSVDSITLKVKKI 150
D +++ D + + + TL V K+
Sbjct: 124 CDDQVSIGDRIYIKEISGNTLIVVKL 149
>gi|88860838|ref|ZP_01135474.1| membrane protein [Pseudoalteromonas tunicata D2]
gi|88817051|gb|EAR26870.1| membrane protein [Pseudoalteromonas tunicata D2]
Length = 149
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/152 (32%), Positives = 81/152 (53%), Gaps = 8/152 (5%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIY 62
+E WHWLILG +LL AE + FLL +AA + + +P L ++
Sbjct: 2 LELFTQIEAWHWLILGLLLLGAEALGTAGFLLGAAIAAFCIMLVKFALPELSWQWQMSLF 61
Query: 63 AVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIG---VQGKVLTIAENGIGRGAFGD 119
AV+++ILSI++W++ +Q K LNQR H +IG V + +TI EN + GD
Sbjct: 62 AVLSVILSILYWKFFKRFNQQSDHKE-LNQRSHHLIGKEWVLSETITIGENHV---QIGD 117
Query: 120 TTWRI-QGRDLAVNDIVEVVSVDSITLKVKKI 150
T W++ +D+ V+V+S D ++L + +
Sbjct: 118 TYWKVFSDQDIKAGSRVKVISADPMSLTIGTV 149
>gi|117619384|ref|YP_858040.1| nodulation efficiency family protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117560791|gb|ABK37739.1| nodulation efficiency family protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 151
Score = 53.9 bits (128), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 3/141 (2%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
WHWL LGF LL EV+ FLLW G+AA+ V G++ + A +++ + +++ +
Sbjct: 11 WHWLGLGFALLAIEVLGSVGFLLWTGIAALEV-GLLLLVWPFGWQAQLLLFGLQSLLTTW 69
Query: 72 IWWRYQHGKDQIDQSKSV-LNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQ-GRDL 129
WWR+QH +D+ + + +N+R +G + +L G+ R DT W ++ + L
Sbjct: 70 AWWRWQHRRDRSSRDAAAPINERMQGYLGRELVLLDDVTQGMSRVHLDDTAWTVRCNQPL 129
Query: 130 AVNDIVEVVSVDSITLKVKKI 150
+ V V DS L V+ +
Sbjct: 130 SAGSKVRVTGHDSHILLVEPL 150
>gi|28897578|ref|NP_797183.1| hypothetical protein VP0804 [Vibrio parahaemolyticus RIMD 2210633]
gi|153838367|ref|ZP_01991034.1| membrane protein [Vibrio parahaemolyticus AQ3810]
gi|28805790|dbj|BAC59067.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149748226|gb|EDM59085.1| membrane protein [Vibrio parahaemolyticus AQ3810]
Length = 153
Score = 53.9 bits (128), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 4/141 (2%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIP-ALPLSALAVIYAVIAIILS 70
WHWL GF+LL E++ + LW GL+A++V ++ +P L L+ +A +++ +
Sbjct: 13 WHWLAFGFVLLAVELLGTAGYFLWLGLSALLVGALLAVLPFGWQLQWLS--FATFSLLTT 70
Query: 71 IIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQ-GRDL 129
+WWR Q +D+ D LNQ+ +IG + G+ R DTTW Q +++
Sbjct: 71 WLWWRRQWSRDKQDDQTRDLNQKYKQLIGRSVILEEDFSIGLNRIRIADTTWSAQCEQNI 130
Query: 130 AVNDIVEVVSVDSITLKVKKI 150
V++V++D I L V+ I
Sbjct: 131 RAGTRVKIVAIDGIILIVEPI 151
>gi|153217067|ref|ZP_01950831.1| membrane protein [Vibrio cholerae 1587]
gi|124113897|gb|EAY32717.1| membrane protein [Vibrio cholerae 1587]
Length = 155
Score = 53.5 bits (127), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 2/149 (1%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIY 62
+E L+ WHWL LG +LL AE++ + LW GL+A++V ++ +P L + +
Sbjct: 2 VELLSQLNFWHWLALGLLLLAAELLGTAGYFLWLGLSALLVGVLLAVMP-LGWQLQWLAF 60
Query: 63 AVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTW 122
A +++ + +WWR Q +D+ ++ LNQ++ ++G + G + GDT W
Sbjct: 61 ASFSLVTTWLWWRRQFSRDKKQDTERDLNQKEKQLLGRIIPITEDTPAGEFQVTLGDTAW 120
Query: 123 RIQ-GRDLAVNDIVEVVSVDSITLKVKKI 150
+ + LA V VV+VD I L V+ I
Sbjct: 121 TARCDQQLAAGSRVSVVAVDGIILVVQPI 149
>gi|116188631|ref|ZP_01478400.1| hypothetical protein VchoM_02002432 [Vibrio cholerae MO10]
gi|116215547|ref|ZP_01481532.1| hypothetical protein VchoR_02002576 [Vibrio cholerae RC385]
gi|121587338|ref|ZP_01677109.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|147674677|ref|YP_001216447.1| hypothetical protein VC0395_A0496 [Vibrio cholerae O395]
gi|153222780|ref|ZP_01953439.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|153818620|ref|ZP_01971287.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|121548421|gb|EAX58481.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|124118654|gb|EAY37397.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|126510846|gb|EAZ73440.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|146316560|gb|ABQ21099.1| conserved hypothetical protein [Vibrio cholerae O395]
Length = 149
Score = 53.5 bits (127), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 2/149 (1%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIY 62
+E L+ WHWL LG +LL AE++ + LW GL+A++V ++ +P L + +
Sbjct: 2 VELLSQLNFWHWLALGLLLLAAELLGTAGYFLWLGLSALLVGVLLAVMP-LGWQLQWLAF 60
Query: 63 AVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTW 122
A +++ + +WWR Q +D+ ++ LNQ++ ++G + G + GDT W
Sbjct: 61 ASFSLVTTWLWWRRQFSRDKKQDTERDLNQKEKQLLGRIIPITQDTPAGEFQVTLGDTAW 120
Query: 123 RIQ-GRDLAVNDIVEVVSVDSITLKVKKI 150
+ + LA V VV+VD I L V+ I
Sbjct: 121 TARCDQQLAAGSRVSVVAVDGIILVVQPI 149
>gi|21232309|ref|NP_638226.1| hypothetical protein XCC2878 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66767558|ref|YP_242320.1| hypothetical protein XC_1231 [Xanthomonas campestris pv. campestris
str. 8004]
gi|21114077|gb|AAM42150.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572890|gb|AAY48300.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
Length = 144
Score = 53.5 bits (127), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Query: 29 PGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSIIWWRYQHGKDQIDQSKS 88
PG FLLW G+AA V ++ +P + V + V++ + ++ + GK + +
Sbjct: 23 PGAFLLWMGIAAAAVCVLVLAVPGTSVLLQIVAFVVLSFVAIQVYRTWFRGKGR-QSDRP 81
Query: 89 VLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQGRDLAVNDIVEVVSVDSITLKVK 148
+LN+R +IG + +G GR D W + G DL +V +V+VD +TL+V+
Sbjct: 82 LLNRRAEQLIGRSVLLDQAIVDGRGRAKVDDAFWVVSGPDLPAGALVRIVAVDGMTLQVQ 141
>gi|150422209|gb|EDN14173.1| Membrane protein implicated in regulation of membrane protease
activity [Vibrio cholerae AM-19226]
Length = 155
Score = 53.5 bits (127), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 4/150 (2%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIP-ALPLSALAVI 61
+E L+ WHWL LG +LL AE++ + LW GL+A++V ++ +P L LA
Sbjct: 2 VELLSQLNFWHWLALGLLLLAAELLGTAGYFLWLGLSALLVGVLLAVMPFGWQLQWLA-- 59
Query: 62 YAVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTT 121
+A +++ + +WWR Q +D+ ++ LNQ++ ++G + G + GDT
Sbjct: 60 FASFSLVTTWLWWRRQFSRDKKQDTERDLNQKEKQLLGRIIPITEDTPAGEFQVTLGDTA 119
Query: 122 WRIQ-GRDLAVNDIVEVVSVDSITLKVKKI 150
W + + LA V VV+VD I L V+ I
Sbjct: 120 WTARCDQQLAAGSRVSVVAVDGIILVVQPI 149
>gi|153829876|ref|ZP_01982543.1| membrane protein [Vibrio cholerae 623-39]
gi|148874619|gb|EDL72754.1| membrane protein [Vibrio cholerae 623-39]
Length = 155
Score = 53.1 bits (126), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 4/150 (2%)
Query: 3 MEWLADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIP-ALPLSALAVI 61
+E L+ WHWL LG +LL AE++ + LW GL+A++V ++ +P L LA
Sbjct: 2 VELLSQLNFWHWLALGLLLLAAELLGTAGYFLWLGLSALLVGVLLAVMPFGWQLQWLA-- 59
Query: 62 YAVIAIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTT 121
+A +++ + +WWR Q +D+ ++ LNQ++ ++G + G + GDT
Sbjct: 60 FASFSLVTTWLWWRRQFSRDKKQDTERDLNQKEKQLLGRIIPITQDTPAGEFQVTLGDTA 119
Query: 122 WRIQ-GRDLAVNDIVEVVSVDSITLKVKKI 150
W + + LA V VV+VD I L V+ I
Sbjct: 120 WTARCDQQLAAGSRVSVVAVDGIILVVQPI 149
>gi|85715894|ref|ZP_01046872.1| hypothetical protein NB311A_16849 [Nitrobacter sp. Nb-311A]
gi|85697301|gb|EAQ35181.1| hypothetical protein NB311A_16849 [Nitrobacter sp. Nb-311A]
Length = 148
Score = 53.1 bits (126), Expect = 5e-06, Method: Composition-based stats.
Identities = 52/145 (35%), Positives = 74/145 (51%), Gaps = 8/145 (5%)
Query: 6 LADWGVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVI 65
A G W+WLILG +L+ E++ PGVFL W GLAA +V G + F+ +++AV
Sbjct: 5 FASLGNWNWLILGLVLVGLELLTPGVFLFWLGLAAFLVGG-LSFVVDSTWQTQLLMFAVF 63
Query: 66 AIILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAE---NGIGRGAFGDTTW 122
A W R K S LN+R HA++ G+V T+ + +G G DT W
Sbjct: 64 AAAAVPFWRRMARSKASAGDS-PFLNKRAHALV---GRVFTLEKPIVDGAGTVRIDDTIW 119
Query: 123 RIQGRDLAVNDIVEVVSVDSITLKV 147
RI+G D V++V D +L V
Sbjct: 120 RIEGPDAPAGSRVKIVKADGASLTV 144
>gi|156934927|ref|YP_001438843.1| hypothetical protein ESA_02776 [Enterobacter sakazakii ATCC
BAA-894]
gi|156533181|gb|ABU78007.1| hypothetical protein ESA_02776 [Enterobacter sakazakii ATCC
BAA-894]
Length = 151
Score = 53.1 bits (126), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 3/118 (2%)
Query: 32 FLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSIIWWRYQHGKDQIDQSKSVLN 91
FLLW G+AA V G++ ++ L V +A+ +I +WWR+ + Q + + LN
Sbjct: 31 FLLWSGVAA-VATGLLTWLLPLGWEWQGVSFALFMLIAVWLWWRWLSRRAQ-PRPDNALN 88
Query: 92 QRDHAMIGVQGKVLTIAENGIGRGAFGDTTWR-IQGRDLAVNDIVEVVSVDSITLKVK 148
QR +IG + + ENG G+ GD+ W + DL +VEVV++D I L+V+
Sbjct: 89 QRGQQLIGQRFMLTQSLENGRGQITVGDSVWPVVASSDLPAGTVVEVVALDGIRLRVQ 146
>gi|50085989|ref|YP_047499.1| hypothetical protein ACIAD2966 [Acinetobacter sp. ADP1]
gi|49531965|emb|CAG69677.1| conserved hypothetical protein; putative membrane protein
[Acinetobacter sp. ADP1]
Length = 156
Score = 52.8 bits (125), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
Query: 12 WHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALAVIYAVIAIILSI 71
WHW +LG +L+++E+VI LW+G+AAI+V+ ++ P + ++ +++ +++++ ++
Sbjct: 8 WHWFVLGILLMLSELVITAFAALWFGIAAIMVSVLLWLFPMMGITTQVIMWIILSVLCTL 67
Query: 72 IWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIA 108
+W+++ ID++K+ L++ A IG G V+ +
Sbjct: 68 LWFKFIKPL-SIDKTKAGLSR--EATIGQIGMVIRVG 101
>gi|15966558|ref|NP_386911.1| hypothetical protein SMc04021 [Sinorhizobium meliloti 1021]
gi|15075829|emb|CAC47384.1| HYPOTHETICAL TRANSMEMBRANE PROTEIN [Sinorhizobium meliloti]
Length = 151
Score = 52.4 bits (124), Expect = 9e-06, Method: Composition-based stats.
Identities = 46/144 (31%), Positives = 76/144 (52%), Gaps = 5/144 (3%)
Query: 10 GVWHWLILGFILLIAEVVIPGVFLLWWGLAAIVVAGIMKFIPALPLSALA---VIYAVIA 66
G W W +LG +LL AE+++PGVFL+W LAA+V + F P + V +A+++
Sbjct: 10 GPWSWWVLGLLLLAAELILPGVFLVWIALAALVTGALSLFFWEAPFWSWQVQFVAFALLS 69
Query: 67 IILSIIWWRYQHGKDQIDQSKSVLNQRDHAMIGVQGKVLTIAENGIGRGAFGDTTWRIQG 126
+ +I R+ + D+ +LN+R +++G + G GR DTTW ++G
Sbjct: 70 VASVLIGRRFVSSSAESDE--PLLNRRGESLVGRTAVLEQPIAEGRGRVRLDDTTWSVEG 127
Query: 127 RDLAVNDIVEVVSVDSITLKVKKI 150
DL V V +V+ L V++I
Sbjct: 128 PDLPVGARVRIVASSGRHLTVEQI 151
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.327 0.143 0.464
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 538,967,556
Number of Sequences: 5470121
Number of extensions: 20364386
Number of successful extensions: 96275
Number of sequences better than 1.0e-05: 134
Number of HSP's better than 0.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 96053
Number of HSP's gapped (non-prelim): 134
length of query: 150
length of database: 1,894,087,724
effective HSP length: 113
effective length of query: 37
effective length of database: 1,275,964,051
effective search space: 47210669887
effective search space used: 47210669887
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 124 (52.4 bits)