Orthologous groups were examined in similiarity searches to gain
an understanding of gene organization
potentials. These preliminaries made use of a larger data set than
merely all available STD pathogens (eight complete genomes). Each
genome was used as a query against every other genome. The set of
genomes includes the genomes of the known bacterial STDs.
IMPORTERS
Subfamily 1
Simple sugar
transporters
Subfamily 2
Peptides
/ Nickel transporters
Subfamily 4
Polar amino
acids transporters
Subfamily 2/4
Unknown
substrate transporters
Subfamily 5
Maltose/sn-Glycerol-3-phosphate
transporters
Spermidine / Putrescine transporters
Thiamine
transporters
Betaine /
Choline / Proline transporters
Taurine/Nitrate transporters
Subfamily 8
Zinc/Manganese transporters
Iron complex
/ Vitamin B12 transporters
Subfamily 10
Branched-chain amino acids
transporters
Subfamily 11
Phosphate transporters
Molybdate transporters
EXTRUDERS
Subfamily 6
msbA
transporters
Subfamily 7
Sodium
transporters
Teichoic
acid transporters
Subfamily 9
Unknown
substrate transporters
Subfamily 12
Subfamily
12 transporters
UNCLASSIFIED
Sulfate /
Thiosulfate transporters
Unknown
substrate transporters
L O S A L A M O S N A T I O N A L L A B O R A T O R Y
Operated by the University of California for
the US Department of Energy
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